>Osa10LNT0071400.3

TAAGCAAAATTCCATCTTTATTTGAACAGCATAGATGTTCAAGGATACATCATGGATGACCACATGGAGACCTAAACTAGATGGGATAGCAGGGACCATACTTAGACACTGAGGCAACATAGAGCCAGATGCCAATAACAGGCCAAGGACCCATACAAATGCACTGGCATAGCCTACAAGAACTTCACCCAACTGGTTCTACAAGCAGTAAACTGCTTCCACAGAGAGCTACTGATACCAGCTAATGGTCACTGGATTATATACATCAGCTGTCTACTTCCATAGTCATTGAGTTCTTTAGGATCCTTTGCTAATCAGGTTGGAGGCAGCCACCATATTACAGATCATGGAGCTCTGTCAGGGCAAACAGACTGTTTATACAGCTTCTAGACAGTGGCGTCCATAGTCTGGGAAACACCATGAACACCTTCCGTAGTTGGTCATATTTCCACTAGTCAATTGGATCAGTTTGTTCAAGATGATCTTCAAAAGCACTGAAGCAGCAGTAGTTGTTGGATGAACAATCACAAAATCAACTCTATTTTGGACTAGTAGAGCTCAGATACCCCAACTGTTGAGCCAGTTCGTCGATGCCGTCAATTTTGCCATCCAACTCTGACTGCTCCTCCTTGCCTGTGAAATCTTCAACCAACAGCTCTGCCCAGAAGTCATCTCCGAGCTCTGCCTGACCATTAGTTTGATTCTGCCTCTCTTCATCTACTTTACCCTTCCCCAGATCCTGAATGTTCACTGCGAGATTCTCCAGCTCAGGGATTCCAGGTTCACTTAACTCATTAAGCACACCTGAATCAAACAAATACGGCGAATCAAGTTGCTCAGTCTGACTTGTTTCCCCAGGGTCATAGAATGGAACATTGTCTATAGGCCGCCTTCTTTTCTTCGAGATGGCATCCTCAAGCTCCTTCCTCTTCTCTTTCTGCTGTGCCAACTGCTGGAAGAACTCTGGGTTGCGCATTGCTCTTGCCAAGAACCCCATCATCTGGACCTGTTTCTGCTCAGCGGCTCGTAGCCTATCTTCCATGGCTTTCACATGATCTTTAGTGGCCTGCTGCTCCTGCCTTAGCTTTACTACCTCTGTGATCAAGATGTTCTTATCACGCTTCAGCCTGTCAATTTCTTCCTCGAATCCAAACTCACCAACTTCCAGACAAGATGTGAGGGACTGTTGTTGTGACGGAGGTGCATTGGACGGGGGCTTCCTTCTCTTTATCGTTTTCAGGAGATGCCTTTGGCCCCTGAGAAAACCCTCATTTGCAAACTCCCACCTATCAGGATCGACCTTTCTGAAGCCGTAGGTGTTGAGCTGCCGGACGAAGCTGGAGAAGTTGTTGTGCTTGAAGAGGCGCGGGAGGAGGAGGTCGGCGAAGACGTGCGGGTCCCAGACGACGAAGCTGTTGCCCGCGCGGCTCCACGACACGACGCCGTCGGTGGCCGGGTCCTCCACCAGGTCGTACGTCTTCGTCAGGAACGGCGGCGGCCCAACCTCGTGCAGCCCCTCCATCGGCCGCGGCGCCGCCCCGCCATCCTCCTGCCGCTGCTGCTGCTGCGACTCCAGCATCTCCTCCTTCACAATGCCCGCCGCCGCCGGGTCCATGACCCCCCCTCCCGCCTTTCACAACCAAGAACCCAAATTAACCCCAGCAACTTTGATCAAGAACTCGAATCGGAGTATCAGGCGACGAATTGGAACCAAGAACACACGCGATCGCTGCTGCTACAGGTGGTGGAATTTCGGGGATATTTTGGGATATTTTTTTCTTCTTCTGCTTTCCCTTTCGAGGTCAAACAAAAAAAAAATGGTGGGGATGAAACGAAGCGAGAAATTCTTCGTGTGCGGGGGGAAGAAGAGCGAGGGCGGAGGGTGGTCGGAGAGATAAAAATACCCTCGCCGTACGTCGAGAGGCGTCGGGAGAGGTGTGGAAGGTTCTAGACGCCGCGTAGGGTAGCGTCGCCACTGGCCGCGGAGAAGCTTCT

Explanation	CPC Score
noncoding (weak)	-0.30657

Transcript ID	Chromosome	Locus	Ref	Alt
Osa10LNT0071400.3	10	14748421	C	T
Osa10LNT0071400.3	10	14747950	C	T
Osa10LNT0071400.3	10	14748453	C	A
Osa10LNT0071400.3	10	14748501	A	G
Osa10LNT0071400.3	10	14749400	T	A
Osa10LNT0071400.3	10	14747807	C	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa10LNT0071400.3	osa-miR528-5p	Translation	4.5	23.285	1	21
Osa10LNT0071400.3	osa-miR2863a	Translation	3.0	19.923	1	21
Osa10LNT0071400.3	osa-miR2871a-3p	Cleavage	5.0	23.589	1	21
Osa10LNT0071400.3	osa-miR2871b	Cleavage	5.0	23.589	1	21
Osa10LNT0071400.3	osa-miR2925	Cleavage	3.5	16.073	1	19
Osa10LNT0071400.3	osa-miR171c-5p	Cleavage	4.0	17.762	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa10LNT0071400.3	10	ssd10	Morphological trait	Panicle/flower	RG257	RZ583
Osa10LNT0071400.3	10	nan	Physiological trait	Sterility	C701	C16
Osa10LNT0071400.3	10	nan	Resistance or Tolerance	Drought tolerance	RZ892	BCD386
Osa10LNT0071400.3	10	qSPB2-1	Morphological trait	Panicle/flower	C1633	RM239
Osa10LNT0071400.3	10	qSPBp10-2	Morphological trait	Panicle/flower	C1633	RM239

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus