© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0071600.1
AGTTCATAGCTCAAACTGGACTTGATTACTGATAGCACAAGATTTAAAACGGAGCAAGATTAAGATTAGGGTATGTACATATATACAAGTGTTAGGACTGCGACAAGAAGCTGTCGAAGCAAAACTGAGGTCGCTGTGATGACAGTTGCAATAGTCTTCTCCAGTTTCTTTCGTAGTGAGGATTTCAGAGATGAAATAATAAGACCACTTTGTAATTCTAGGTGGATCAATTATTACAAGCAGAAGACAGATAGTGAACTTATGGTCAAGAACTGCATATACCAAGGTCTGTTCTACATAACATCCAAAGTTTCTTACGACAAATAGGGGGAAGTAATCTTTGTTAGGTCTGTTTTGCAATGCTTTGCCGGCCTGAAGGAGAAGCCAGATGGAACAGTGGGAATGCAATATTCAGATCCAGGAGGGTTCCACAAGCAGAGGTACGCCAATAAGAGAAACTGAAAATCACTATGGCGTATCCGATGAGACACTGTTTTGAATTTCAAACCTTTTGCGAAATACGCCATGCTAAATCAGATGGTCACCACACTGAGTGATTATGCATCCTCCATCCATCAGCAATTTGCTGGGCATTTCCAGCAGCAGCTCTCCTTAAGCAGCCCTTGGACAGCCATCGCCATGCCTTTGTTGTTGGCTCTTTGGCATTGTGATAGCTACGATGGCTGGTGATCTGCTTCCTCACTGTGCCGACAGCTTCCGGGGACGAACAGTTTGAAGAGTCCCTGATAATGCAATATGAAACATGTAGAAATTTTCTTCTAAAAATACCTCAGGAAAAAAGGGCATAACCGCATCACAGCAACAAGCAGACCAAACTGTTTAGTGGCAGGTGTCTAGGTGATCTCCAACTGGAGAACAGAATATGTATGGCTTTATTGAATCTGTGGTGTCCTTCATCATGACAAGAGAAGAGTGCTGGTTAAAAAGAAGCAATACGCATCATCCACAACTTCAGTAGAAAGAAAATGGGTAATGTGCACACAGATCAGTTGTACTTGAACCACATATAATGGATGGACTTGATAAGAGTTTAACAACTGTAACCTCACAATGTCAGTTAAATTGAACAGATGATTCAAGTGATCAAGTCAGCTGTGTATTGAATAATTTTCTTCCATCAAGTACAAAAATATAGTGTAGAACAAGAACCAGCAGAACCCTCAGATATATTGAAGTGGACTATCTACAGTTGATCCTTTTCCTTTTATAGACAAAACTATACAGAAGAAGTACATTCAGTCACTAACTAGTTAGTCACAGCTGATTTGGGAGCTGCATGTACGTGCTTGAATTGGGTAGGCACCCGCCAACAATCATCCGACCATAGGCAGCATAGGCACTATCAGTACTGCCGGAAACACTGTACCCCCTAATAAGAGCGTTATATGTGAAAACGTTAGGCTTCCAGCCTTTCGTCAGTAGCTCTTCATACATTTTCCCAGCTTCAGCAGCCTTCCCTGCTTTTCCTAAGTGGAGAATTAGTGAATTATAAGTGTACAAGTTCGGGACAATTCCCTTCTTCTGCATCTCATTGAATAGAGACACTGCTTCCTCTAATCTTTTTGATTTTCCAAGACCATCAATGAGCAAATTGTAAGTAATTAGATCAGGTTCAAGACCCATTTCTAATAATTGCCTAAAATATGTTAGACCATCATTTAACTGTCCTGCCTTGCAGAGTGTGTCAATAATAATCGTGTAGGATTTTATATCTGGGTTTATTCCCTGGTCAACCATATCCTGAAACAAATGACAGACCTTCTCTGTATTACCAGCTATTCGATGTCCATTCAGTAGTATATTGTAGATAGTGCAATTGGCCTTGCATCCATACTCCAGCATCTCATTGAAAAGATTTTCTGCATCTTCTATCCTTCCAGCTTTTAACAGACCATCAAGAAGAGGGCCATATGTGCATGGTGTGGGTGAGAAACCTTGGCTCATCAGGTTGTAGTACAAATCAATAGCCTGCTCCAACCTTCTTGACTTTACAAGACCTGAAATGATTGTGTTATAAGTAACATAAGTTGATTCATATCCCTTGCGATGCATCTCTTCTTGAACTTTTAGCATTTCCTCTATCCGCATTGACTTTCCCATGGCATCAAGAAGTAAGTTGTAAGTAAACTCATCTGGACCACAACCGAGTTCCTTCATTTCAGCAAACAAGCCTTCAGCAATATCTATTAGGTTTTCATCAACAAGCCCACAAATCAAAGAATTATATAATCCAGTTTTTAGTGAAACTCCAAAGCTCTTGAACTTTTTGACAAGTTCATGTGCTTCAAGAGCTTTCTTCTGCTTACAGAGATGCTTAATTAATGGGCACAAAAAGAAATCATCCAAGGTAATACCACTTGATGCTATGATTTCAGCAAACTCAATTGACTTTTCGATGCCAGCCTTCTTCAGTATCCCTTCCATTAGTGAATGGCATGAAGACCTATCTGTTTTGGAGCCAGGTTGGAGGAAGTAGTCCTTGATAATATGCAGAGCTTCCTTCATCAGTCCAATTTTCACAAAACTTGGGAGGATAGTACACAGTGTTGCATAATCTGGAATAAGAACCTTCTTCATCTGACAAAAAATACTGAATGCCTCATTATATCTTTCTTCTTTAACAAGGCCATATATAACAGTGTTGTAAGACGAAAGATCAGGTATGCATCCTTTCGTAGTCATACTGTATAGCATATCAAGTGCATCATTAACTGCCCCGTTCTTGCAGAGACAGTCAAGAATCGTATTGTATGTTATCAAATTAGGAGGATAATTACTGTGGTACATTTCTTCAAGCAGATGCATTACCTCCTTGACTTTACCTTCCCTTCCCAATCCTGCCAAAAGTGTATTGTAAGTCCCATCTGTTGGCTCTAGATTCATTTCTTTTAGTTGATAAAAGATCCGCCAGGCTTCATCACCCCTGCCTGCCTTGTAGAGTGTATCAATCAAAGAATTCACGGCAAGAACATCAGGAACACAATTATTTTCAATCATATCATAGAAAATCTTCACAGCTTCATCAAATTTTGATGCCTTGCTGCAACACTTGATCATCATAGTGTAGGTGATAGTATCCGGAGAAACCCCCATAGCTTTTAATTCATGAAATACCCTTTTTGCCATGCCAAGTCTACCAGATTTGGCAAGACCAAACAAAACAGCATTACCAGCAACAACATCTGGCACAATCCCTTTGCTCTTCATTAGTTCATATCTCTGTATTGCCTTTATAGATTCACCAGATTTTCCATAGTAATTTATGAAAAGAACATGTGTGTAACCATTTGGTTTAGGTCCATGAATATCCATATGTTTAAACAGCTCTAAGGCATCACCAAATCTATCAGCTTTAAGAAACCCCGATATCAGCGAGTTGTATGAATACTGCTCAGGCACTATACCCTTTTGTTTCATCTCATCAAACATTTCCAAAGCTTCAAAGACCCTCCCAACTTGGCACAATGCATCAATAACTGCTGTATAAGCAACAACATTGTCATTGTACCCATCAGCTTTCATTGCATTCCAGATTTCCATCACTGATTGCGAGTCACCATTGTCACCAAACTTATCTAACAGAGTAATGTAGGTCACTCGATCAGGTTTTTGATCACTCTTCTTCATCTTCCAAAAAACATCCTTGGCATCACTGATACGGCCAGCATCGCAAAGAACCTGTATAAGCACGGTATGGGTAATGACATCCGGCTTACACCCTTCATTCTCCATTTTCGCAAGTATCCGATAAGCTTCATCGAATCTTTTGGCTTGTCCAAGAACTCGAATACAGATGGTGTAGCTATACACATTCGGCTTCACGCCATGAGCCTCCATTTCACGCAACAACCAAAGAACCGTCTCGACATCCCTCCTCTTCCCGAACGCCACCATCAGCACAGAGTAGGTTCTCACACTAGGCACAACACCATCCACCATCATCACCCTATAAACCTCCAACGCCTCCCTATCAAACCCGGACTTCACAAGGAAATAAACCAGGCCATTATACGTGTACGCGTTCAAGACAATCCCGGCCTCCTTCATGACCGGCAGCGCCACCGGCGCGCTCCGGAGTCCCCCCTCCACACCAAGCCCTCCGAAGATCGCCGCGAACGTGCCCACGTTCGCCTTGACGATCTGCCTCTGCATTACGTCGAACACCTCGGCCATGTCCCCGACCCGGCCATGGCCGCGCATGAGCTCGAGCATGTAGTTGCACGACGCGGTCGTGTGGGCCACCCTGGGCTTCCGCGCCGCCGACCTGAACCGCTCAAGCGCCTCGGCGGGGCCATCCGCCGACCTGAGCGCGTGGATGACGTCCTCCGCCGCCCTCCGCTCGTCGCACGGCGGCGGCGCGCGCGGCTGCACCCGGGCGCGGCCGATTCGCCGCTTACTGGGCCGAGACGGCGATAGTCCAGGTGAGGAAACCCCCGCAGTCCTCGACGACGGCGGCGACCCGCCGAGGACGCCGGAGCAGCAGCAGACCTCCAACATCCGGCGAGCAACAACGACAACAACAACACCTGAAAAATTCCCAAGAAGCACCAAGAAACTGAGAGAATTTCAAGAAACATCAGCGAGAATCCAACTTGAGACGAACAAACAAACTGTTACTACTTGTATTAAGGTTAAGTATCGGAAATTAAGAGAGGAGCTTAACGAAAGCAAAGCAAATTCCAGGCAAAAGTAGTCCCGGTGGGAGAGAGAGAGATGAATCAGGAAGAGGATGTGGATGCTCACCACACCAGGATCCCCTCCCTTGCTCTTGCTCTGCTCGCCAGATGGAGATAGGCGGCCCTCCCCTCCACTCCCCTGTTCAGCCGCGAGATGGCGCAAGGAGTGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0071600.1 | 10 | 14896549 | T | C |
| Osa10LNT0071600.1 | 10 | 14894538 | T | C |
| Osa10LNT0071600.1 | 10 | 14894546 | A | G |
| Osa10LNT0071600.1 | 10 | 14895226 | G | A |
| Osa10LNT0071600.1 | 10 | 14895677 | G | A |
| Osa10LNT0071600.1 | 10 | 14898966 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0071600.1 | osa-miR5526 | Cleavage | 4.0 | 8.113 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR5526 | Cleavage | 4.5 | 12.721 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR5542 | Translation | 5.0 | 6.8 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR1319b | Cleavage | 5.0 | 14.697 | 1 | 24 |
| Osa10LNT0071600.1 | osa-miR1319b | Cleavage | 5.0 | 11.119 | 1 | 24 |
| Osa10LNT0071600.1 | osa-miR6254 | Cleavage | 4.5 | 13.299 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR396a-3p | Cleavage | 5.0 | 20.656 | 1 | 20 |
| Osa10LNT0071600.1 | osa-miR396a-3p | Translation | 5.0 | 11.634 | 1 | 20 |
| Osa10LNT0071600.1 | osa-miR396b-3p | Cleavage | 5.0 | 20.656 | 1 | 20 |
| Osa10LNT0071600.1 | osa-miR396b-3p | Translation | 5.0 | 11.634 | 1 | 20 |
| Osa10LNT0071600.1 | osa-miR399i | Cleavage | 5.0 | 23.22 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR530-3p | Cleavage | 5.0 | 22.167 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR1850.1 | Translation | 5.0 | 14.693 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR2095-3p | Translation | 4.5 | 15.398 | 1 | 20 |
| Osa10LNT0071600.1 | osa-miR2864.2 | Cleavage | 5.0 | 7.96 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR5149 | Cleavage | 5.0 | 11.111 | 1 | 22 |
| Osa10LNT0071600.1 | osa-miR5491 | Cleavage | 2.0 | 11.441 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR5521 | Cleavage | 5.0 | 18.758 | 1 | 21 |
| Osa10LNT0071600.1 | osa-miR5490 | Cleavage | 4.5 | 12.909 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0071600.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0071600.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0071600.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0071600.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0071600.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)