© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0005300.1
GCTATTATATCTTATTATATCTTACTTGTGTACAGCTGCTGTCCTGATTGTAGGGAAAGAGGTTATCAAGCAACAGTAAGTACTAAACATGAATACCCCTTTAATGACAATGGTATTCCACAGGGTGGATGAGTCTTTTTTTTTCCCTCTACTCAACCCACCAAATCAAATTTCCACTAGGAAATCCAATGTGACAAAAGTTCTCTGAAATAAAAGCTTCAGCATTTTCTAACAACCATGTTGTAATCTTGAAATTTTGGCTCTTTTCTTCTCTTGAACTAATCCCAGAATTATTATGTAACTGAAAATTTTCACTTTTGTGATTTGTATGTCATGTATTTCTTGCATCCATTGGGCTGTCACTGTACCATTCCCTCAGTCACAAGTTCTTGCAAGCCGCGCCTTAACCTCTCAGCAGCAAGCCTTGTATCCGATTCTTTCAACCCTCCGAAAGAAACCCGGATATATCCGGGACCTCCACTGGCGCTCCCGGGGATCACAGCCACACCATGCTTGTTTGCAAGCCATCTGACAACTTCAAAATCATCTGAGCATTTCTCGGGTAGTTTTGCCCAGAGGTAAATGGCACCCTCACCACCCTTGACAGAGTCCTTGCCAAGCGGAGACATCGCTTCCATGAGCAATTCACGGTTTTTCACTAGATCTCTCACCCTTTCTCTGATCCATTCTGGACCAGCCTCTAATGCGTAGAGCGCCAGGCGCTGCCCGATGATGGAAGCACAGATAGGTATGTTATCTTGCACTTTGAGCAGCTGTGCATGAAGACCGTCAGCTTCGTTTGGGTGGGCAATGTATCCTACACGCCAGCCCATCATTCCGTAAGCCTTCGAGAATGAGAAGAGGTTGACAATGTGATTACCCTCTAAGCAATAGTGCTCCATTCCATCATACATAAAGTACCTGGAGACCACCCACCAATTTTGCAAGCAAGTTCAACATCAAAGTTATACAGAATCCAAAATAGCCCCATATGTAGAATTATTTTACAGAAAGTAAAAGGTCAGTCACCTTTTATGGAAAAGAATTCTTCCGAGAAAATGTTTTCTTGAATTTCAGTATTCGTGCAAACATTTTGAATACAGATTATCTAAAAATCAATGTGATGATAATTGAAAGTTTCCAAATTATACTTTTATCATATACAAGATTTACACATGTCAAATTCGGTGGTGTATTAACATTGGGAAGTCCATCAAGCTTATATTCGAAAAGGACCCATAGCATCCTTTTAACATCAACATCAGGGTAAGGAAATGGCAAAAACTAATATCAATTTCCATTACTCAACTACAGAGCCAGACAAGAAAAGGTAAACATGATCTGAAATATAGAGCAAGGGTAGATTAGCAAGAGATCAAATATTTCTGATTTGATCAGAACTAACAACAGATATATTCTTCCCAATGCCGCACAGCGGATGCTAGGCTGCTGAAAGTAAGACTTTTCTTGAGGGAAGAGTCTAATCCGTGATTCAATTTAGGCTCTTGTCAGTGAGTCTTCCACTCTGCCTGTAAGTGACTGGAGGGTTTATTTTGGGCATCACTGAAATTGAGGAACTGAAATGGGACCTTCAAAAGAAAACGAGTTGTTCCATGTGTCCAATTCTAGTGTTGAGAAGAAATGGAAGATTTTCCCTACTTGAATAAGCTGAGCATGTGAAGATAACTACATTTGACAAACCCTTACTGGCGGGTGGTTTGCAGATACTTTTTGAAAGAGATACCACATTCTTGAAGTCCTATTTATTTAATCTATCAGAGAGGGCGTCATCCAGGACTCAACTTCAAGAAGTCAAGCACAGTTGCTCAACTGCTTATGGTGAACTGTCCTTTTAAACTACTACTTAAGGTGATCATGTCCATGTGTAGTTCATTCTTTCGTAGTGCCTCGTCTTTACAATTGCTTTAAGTAATATCAATTTCTGAAGGGACTGAGGAGCTTTATCAACAACAGAAAGAAAAGAAGCACCAAAATGACGTTGCAGTTGAGCAATAATCAGTAATTGAGTACTAACTTACTCATAGGTATTGTCAACTACAAGCCATGCACCAGCATTTCTGCACAGTTCTGAAATTCTTTCGAGCATCGGCTTCGGAATGAAAGCTCCAGAGGGGTTTCCAGGATTTACAACACTAACAAGTTTAGGGATAGGGTTGTTTTCTTGCAGAACCTTCTCCAACCAATCGACATCAGGATGAAGAGTCTCAGGATTGCTTGCACCAACTAATATGTCAGTAACTCCTGTCATCTGGAATGACATGTAGGAATTGAAGTAATATGGTGCAAACATGACAACTGCATCCCCAGCATCACAAAGGGTGAGGACCACATTTACAAAGGCCTGATTTGCACCAGAGGTAACCATAATTGACGACTTGGTTAGCTTATTCTCTCTGCGCAGCTTCTCGAGAAGTGCTTCTCGGAGTTCAGGAAGACCATCATCAGAGCCATATTTACTGATTGATGGTTCCCATACAATTTCTTTAATCTTATTCATAGCTGCCTCAGGAGGCTGCCAATAAACAACTCCCTGCGCAAGCGACATCACATCCTTGTTCCCTCGAAGCAATTCCTGCATCTTGACCATGACCGGCGCTTCCGTCTCCACGGCCCTCCTCGCCAGCCTCCCGAAGCTACCCATCTCACCTCCTCCTCCTCCTCTTCCTCACCCCTCCAAGAACAAGAACTCTGAACTTCTCGAGTCAGTCACCAACTGATTCCCCCCAAGGGCTCACCAACCCCAACATCTAAACAAGACAGAGGAAGAAATGAAAAAACAAAAACTGAAAAAAAAATCGCTGCTGATCTAGTATCTACGGAGTATCTATCTATCTATCTATCACTCTTTTATTCCGATTTTTCTGTCTCTTTTCCTGATCTTTTTGGCTTACGTTTGCGGAGGGTGCGCCGCGAAGTTGGAGGATAAGCATGAGACAGAAAAAAAAAGATCAAAAAGGGCTTGACCAACAAATAAAAAGAGAAACTTTATTATGGTGAGAGGACGAAAAGATTTCGTTTTTAACCCCACCGCTATCATTCTTCAACGAATTTCGTCAAAATTACTGCCAACCTGCCAACTGAATAACTGATGGCCGAGAGATTCCAGGACAGAGAGCACAATATTGCGTCTGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0005300.1 | 1 | 4052916 | G | A |
| Osa01LNT0005300.1 | 1 | 4052512 | C | G |
| Osa01LNT0005300.1 | 1 | 4053790 | A | G |
| Osa01LNT0005300.1 | 1 | 4054712 | A | G |
| Osa01LNT0005300.1 | 1 | 4055486 | C | A |
| Osa01LNT0005300.1 | 1 | 4055491 | C | T |
| Osa01LNT0005300.1 | 1 | 4056016 | T | C |
| Osa01LNT0005300.1 | 1 | 4057860 | G | A |
| Osa01LNT0005300.1 | 1 | 4054285 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0005300.1 | osa-miR5812 | Cleavage | 4.5 | 11.384 | 1 | 24 |
| Osa01LNT0005300.1 | osa-miR1440b | Translation | 4.0 | 13.82 | 1 | 21 |
| Osa01LNT0005300.1 | osa-miR6256 | Cleavage | 4.5 | 17.727 | 1 | 22 |
| Osa01LNT0005300.1 | osa-miR166g-5p | Cleavage | 4.5 | 16.43 | 1 | 21 |
| Osa01LNT0005300.1 | osa-miR437 | Cleavage | 5.0 | 16.138 | 1 | 21 |
| Osa01LNT0005300.1 | osa-miR1425-5p | Translation | 5.0 | 14.292 | 1 | 21 |
| Osa01LNT0005300.1 | osa-miR1429-5p | Translation | 3.5 | 21.306 | 1 | 21 |
| Osa01LNT0005300.1 | osa-miR1877 | Cleavage | 5.0 | 11.008 | 1 | 24 |
| Osa01LNT0005300.1 | osa-miR2091-3p | Cleavage | 5.0 | 23.647 | 1 | 22 |
| Osa01LNT0005300.1 | osa-miR2098-3p | Cleavage | 4.5 | 18.227 | 1 | 20 |
| Osa01LNT0005300.1 | osa-miR2871a-3p | Cleavage | 5.0 | 22.832 | 1 | 21 |
| Osa01LNT0005300.1 | osa-miR2871b | Cleavage | 5.0 | 22.832 | 1 | 21 |
| Osa01LNT0005300.1 | osa-miR2931 | Cleavage | 5.0 | 17.74 | 1 | 20 |
| Osa01LNT0005300.1 | osa-miR3979-3p | Cleavage | 5.0 | 11.165 | 1 | 20 |
| Osa01LNT0005300.1 | osa-miR3979-3p | Cleavage | 4.5 | 12.728 | 1 | 20 |
| Osa01LNT0005300.1 | osa-miR5145 | Translation | 5.0 | 21.966 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0005300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0005300.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0005300.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0005300.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0005300.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0005300.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)