© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0073500.1
TCCAGTCATCCAGACATATCAATACCAATGAGTAGCAACTCACAAAAATATACAAGGTTCTGAATTCTGATGCATCTTTGATTCTTTACAGAGTAGACGAGCAAAACTTTAATCCGAGACAGGCATATATATGAAGTATACTGCTACTTCTGGGCCTCTGCCTGTTCAAAGTTTACCTCTGAAGTAGCTAAAAGCTCTACGGGGAAAAAAAATCTCAACTGCTCTGTGCACACTACACTACTACAGTCAAGATGTACAACTATATATTTACAAGGAAAACATACAAAACTTTCCACATCAAGCCGTCAACCGTGTGCGATGTGAGCCTTTGTGTGCTAGCCAAATCCGAACTGTGCGGTCATCACTTGCCGAAGCCAGCATATGTGGCTTAGCAGGATTCCAGCTCACACAATTTACAGTAAGTGAATGACCGTATAAGACCTTTATTGGCGTCTCCAGGTGCCTTTTCCAAATGTAGACCTGGGAATCCTCACTGCCACTAGCTATGAACAGAGAGTTTGATCCACCAAAGCAAGATCTAATCACAAACTTTCCTTGCTTGTGTCCCTTGAATTTATTATCCGCCGCAGTAGAACTTTCACTGATTCTCCACAAATGAATTTCCTGGCTGTTGAGGTTGACAATCAGTGATTGTCCATCACCAGAGAGAGATAGCGACGAAATCGTCTGCTGCTCACGTATTCTCCATTCCCGCCCCTTTGGAAGTTCTCGAATCCAAATTTCATTGGAACATACACAGATAAGATGTTTGCTATCAGGAGTCACAGCTATATCACTGACTTTAGGTATTCTATCTCCAACCCATGATTCCAGTTCTTGACCTTCTAGGTCACAAGTGAAGATCCTCTTTGGAGAACTTTCAGGCTCACAGCTGGCACATACTATTTTCTCCGAATTAGGGAACCATGCACATGAATTGATAATATGGCCAACTGAGCTGCTAAATTTAAGACTGCATTCACCAGTAGCAACGTTCCACAGTTTTACTGATTCTCCATTACCACAAGTGAGCAGCATTCTGTCATTTGGGCTCCAGGCAACAAAAGAAATTGGATTTTTGTGACCCACGAGGCAGTGCTTCTTGGTTAATGTATCATCCTCTTCCACCTAAAATCATCTTTGGGGGTTAGGCATGACAAGAATTTGGAGTTGTAAAGCAAGGAAACAAATGATTATGAACCATCAAACCTGGGTTGCCACTTGCCAGTAAGAAACAGCAAGGAAGAGAAGGAAAAAAAATGATTTTAGCCAAACGATAGTTAAAGAATGCATATTATCTGTCATCCTTTGTAACTTTAGAACAGCTGTAATACCCCACCTCAGAGGTGCCTTCACCTACTAACGAATGGATTTTCCCATTCACATACTTAAAAAACATCTCCCATCTAGCTTAGAATATGTGGCCTCTGTGATTACTAGAACATGGAAAATTAACAACACTTTTAGGCATGTACCACATCTTCAAATGTGTACACAAGGACTGTACAATGTCATCAATTTGTGGACTAAGATGTAAAAACAAATTCTGCCCGAGCTCGACTTGTACAAATAAAGTCCAATTACAAATGAAGACAGGTATATATATATATGACCTTTCACGAGCATCATTGATAAACTTTTCCGTGGACATAAGTTGTATGTGGTGACTGGCAGGAAATGCACTTTAAGCTTACCCCTATTTGGCATTTCAGACATTTACCATAGTATCCAATACTTAAAAATTCATATCAAATTTTTCTGGTAACATTTTTAATAAATAAAGATTTACATTATGAAGGGATTTCTCATAAAGTATATGTGTCAGTTTCACAGGGGAAAAATAGCTCCGCTCATCAGTGGACAAAGTTTAAAATGTATGATTGCACGTATCGTATAAAAGGCATATACTTTCTATAAAATATCTTATAGCACTAGAAATTTATGTTTTCTTCCATACCACTAAGTTTCAACATTTATCCTTTTTGCACCACTCCCATTAAACCTGTTAGTTTCAGCTGCCGTTAAGTCATTGGAAGCTGTCAGATGTTTTTTTCCCGAAAAGACAGTCATACCTCAGTCAATAGTTGCTGGCCCACATTATTGGAAACTTCAAGCTTCTTCTCCTTTCCTCCATTCCTCTTCCTTCCATATGATGGCCGTGCAATCACTTGAAGATGATGCCAGATAGTTTCCATCATTTGAGAACCTTACAAACCAAACTTCATTGTTATGACCACATAATATCTGCGAACACTTGGAAGGAATCTGCTCTTCAGGGCACTTATGATCCTCAAACAAAGTGACCTCGTCCGGTAAATTGTGATATACACAAGACGAAACCTGCTTAACAACTGCATTCTCCACCAGAAGCTCTAGCCGACCGCTTGGCACATGGAACCATGGCGGGAAAGCATCAACCAGATCCAAGAAAAGCCCAATCCTCCACCCGACCACGGCATCCGGCGCGACCGCCCCCTCGCACGAGACCATTGCGCGTGCCAGCCAGTGCACACACTCCCTGTCAACGCCGAGGGGCGCAATCCGGCGCCAGAGCACCTCCCTGGCGCGCGGCAGCCCAGCGTCGCCGATCCCCAGAAGCTCCAGGAAGTGCCCCCTCCACACCAAGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0073500.1 | 10 | 17158986 | A | T |
| Osa10LNT0073500.1 | 10 | 17159281 | G | C |
| Osa10LNT0073500.1 | 10 | 17159409 | T | C |
| Osa10LNT0073500.1 | 10 | 17161061 | T | G |
| Osa10LNT0073500.1 | 10 | 17161485 | A | C |
| Osa10LNT0073500.1 | 10 | 17161550 | C | A |
| Osa10LNT0073500.1 | 10 | 17161854 | T | G |
| Osa10LNT0073500.1 | 10 | 17161938 | C | A |
| Osa10LNT0073500.1 | 10 | 17162482 | A | G |
| Osa10LNT0073500.1 | 10 | 17160074 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0073500.1 | osa-miR5825 | Cleavage | 4.5 | 16.47 | 1 | 24 |
| Osa10LNT0073500.1 | osa-miR396a-3p | Cleavage | 5.0 | 12.722 | 1 | 20 |
| Osa10LNT0073500.1 | osa-miR396b-3p | Cleavage | 5.0 | 12.722 | 1 | 20 |
| Osa10LNT0073500.1 | osa-miR396c-3p | Cleavage | 5.0 | 12.722 | 1 | 21 |
| Osa10LNT0073500.1 | osa-miR169q | Translation | 5.0 | 20.544 | 1 | 21 |
| Osa10LNT0073500.1 | osa-miR440 | Cleavage | 5.0 | 15.026 | 1 | 24 |
| Osa10LNT0073500.1 | osa-miR1862a | Translation | 4.5 | 19.024 | 1 | 24 |
| Osa10LNT0073500.1 | osa-miR1862b | Translation | 4.5 | 19.024 | 1 | 24 |
| Osa10LNT0073500.1 | osa-miR1862c | Translation | 4.5 | 19.024 | 1 | 24 |
| Osa10LNT0073500.1 | osa-miR1320-3p | Cleavage | 5.0 | 17.614 | 1 | 21 |
| Osa10LNT0073500.1 | osa-miR2929 | Cleavage | 4.0 | 17.03 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0073500.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RM596 | RM271 |
| Osa10LNT0073500.1 | 10 | qLSVB10-1 | Morphological trait | Panicle/flower | RM258 | C677 |
| Osa10LNT0073500.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0073500.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Osa10LNT0073500.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0073500.1 | 10 | qLVB10-1 | Morphological trait | Panicle/flower | C677 | RM258 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)