>Osa10LNT0073600.1

GCGACGAATAATTTTTTGACAGGAACCACACAGAACAAAGGTCCAGACTAATAATGCTCAGAGCGAGCAAACTTCTACTCATTAGAGTGACAGGGATATAGAATTGGTAGCGCAGGCAGATAGATTGAAAATCCTAGTAACCACCCTTGAGATCATTGACCACATCGTACGGGATGGGGGTGACAGTCTCCAGTGTTGCACCCTCAACCATGAAGCCGGGCTTAGGACCCTGCGGCTGCCTCTTCGTGCTGATGACCTCACCACGAGCCTTGGCATCTGCCTTGAGCTGGTCGTTCTTGATCTTCCTCAGGCGGAACTCCTCAGTGCACCTGGATGGCTGCACATGCTCCACACGGACATGGATCCTCTTCCTGATAATGCGGTTCCCAACCTGCTTGTTGATCTCGACGCCGATGGCGCGCTTGGTGACGTTCCAGACGCGGCCGGTGCGGCCGTGGTAGAACTTGTGCGGCATCCCCTTGTGCACGGCGCCGTTCACCTTGACGTCGACGTGCTCGCCGATCTTGTAGGTGCGGAGGTAGGTGGTGAGCGGGATGTACCCCTTCTTCCTGAACGGCCGCGCGAACAGGTCGCGCGTCCGCGCACGCAGCCCGTGGCCCGCCGGCATCCTGGCGGCTCCTCCTCCTGCTTCCCTTCGCGCGGCGGCGGCGGCGGCGGCGGGTGAAGAGGTGGGGTGAGCGTGTGTGCGGCGCTAGGGTTCGCGAGGGTTTGGAG

Explanation	CPC Score
noncoding (weak)	-0.674054

Transcript ID	Chromosome	Locus	Ref	Alt
Osa10LNT0073600.1	10	17184614	A	G
Osa10LNT0073600.1	10	17185160	C	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa10LNT0073600.1	osa-miR6246	Cleavage	5.0	23.766	1	23
Osa10LNT0073600.1	osa-miR168a-5p	Translation	4.5	22.559	1	21
Osa10LNT0073600.1	osa-miR5484	Cleavage	5.0	20.962	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa10LNT0073600.1	10	ssd10	Morphological trait	Panicle/flower	RG257	RZ583
Osa10LNT0073600.1	10	nan	Physiological trait	Sterility	C701	C16
Osa10LNT0073600.1	10	nan	Resistance or Tolerance	Drought tolerance	RZ892	BCD386
Osa10LNT0073600.1	10	qLSVB10-1	Morphological trait	Panicle/flower	RM258	C677
Osa10LNT0073600.1	10	qLVB10-1	Morphological trait	Panicle/flower	C677	RM258

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus