© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0073900.1
GTCCGTATTAAATTTTTATATTGATTTATCTATTTTATCCCGTTTGTCCATGTAAAAAGCAACTTGCTCCCGGAAAATCACAAAAAATAAGGGGTCAACTCTAACAAGCAAACGAAATTGAAGGGAGTATACAAAAGCACTCCCTGGTATAGCTGTTATTTTAGTTCTAAAACTGCTATATGGAACCGGTATAGATAGCATCTAGTGGTGAACGTTTTGGCTGTGCAGCAGTTCTACTGCTGCCGCCACAACGCCTTTTCCTTCAGAAAATATGTCAAGTGCAGGCTCCTCGATCTTCCTCTGGAGGAGTTTGTCCAATTCACCTCTTAATCTCTGGATCAACTCTATGATACGCCTTGGTGCAGAGAAATGAAGATACCCCCCAAGCATCTCAATGCCTTCTCCAGTTTTGCTCTCACTGAGAGAACCACCAAAGAGGAGAAGAGCATAGTCGGAAATGTTTGTGGAATCCCTGACATAAATGCTAGCAGTTTTAACCTTCTCGCTATAAACCAGATAAGGCAATGGGAATTGGTGAATTCCCGCATTGACTGATGATGGATGGATATCCACTTTGCCAACATCTTTGGTGTAAAACGCTGTCCTCTTGCCTCGTCTTTTGCACTGAACGACATTTGGGTAAAGCCCAGCACATAGGACAGCACATACCATCTCCAGATCCTTTCCATAATAATTATATGCCTTCAATCCTCTTGTTTTGCTAACAAACCCAATGTCAGATAGTAGATCAAAAAACTGATTACGCATGTCATCCATCATCTGCAGGGTCATGGGTGAAAGGAAATTTTCCCAGCAGAAAGAGCGTTCTCTTCCACTGCGTCTTGCTTCCTTCCATGCTTCGAACGCCTTAACAAGAGCAATGTGATCACTGCAGGAGTCACCAGCAAATGATCTTTTGACAGCATCAGCTTCTTCTTTCCTATCTATTGGGAGCACAAATGGATTACGATATGCAAGAGCAGCAGCGATTGTTAATGCAGGATCCAGACACTGAAAAACAGATCCAATAAGCAGCATTTTTCCAATGTTTGGATCTAGCGGAAGTGTACAAAGATGTCGCCCTAAAGAAGTCAGCTCCTCCACGTCATCCAATGCTCCAACGGTTTTCAAAAGCTCGATCGCATTATTAACAGAAAGCGGGTCTGGTGGCTGCAGTGCCTTGGCTAAGAAAGAGGCTACAGCTCCAAGCTGTAAGCTTTTGATAGTAAGACAGAGCTCTTGCAAAGGAGTCCTAAGAATTTCAGGTAACTGAAACTGTGGCATCGCATCATAAATGACTTTAGGATACAGCCTATAGCAAGCACCAGGCTGAACACGTCCTGCACGACCTCGCCTCTGATGGGCAGAAGCTTTTGATATCCATGATGGTAGAAGGCATGCAAGCTTATTTAAGGCATCATAACTTGTTTCCTTTGCTTTGCCACAATCAATTACATAGACAACATCATCTATTGTAATACTGCTTTCTGCAATATTTGTTGCCAAAACAATTTTCCTCATATTGGCTGGTGGTCTATCAAAAATTTCACGCTGATTGACAGTGGGCATAGAACCATGGAGTGGAATAACCAGGAATCTATTGGAATTTCCAAGGAGATTATTCCCCTTAATCTTATCCAAAAGTTTCGAAATTTCATCCCAACCAGTAAGGAACACAAGGATTGCACCTTCTCCTTCATGACGACAGATGTACTCAATTGTACCTTCAACAAGGCTCAAATTTAGTTCGGTAGCCGACCAAGCTTCAAGGGATTGCCTAGTTGCAACGCTGTAATTTCCATATTCCTTATAAATGTCAACATCCTCAAAAGCATCAGATATTGGATCACTCTTAACTGATGCAAGCCTCTTTCTTCTTGAGTTCCCTTGAAAATTGTCACGTTCAGAATTGATCTTGTACCGGGTCTTCTCTAAAATATCTTCCAAAAACAACTCGGTAACAGGAAATGTGAAGCCCGGGATATGCATAATTGGTGCCTCTCCAAAATATTTGGAAAAAAGTTCTGCATTTATGGTTGCACTCATCAATACAAGGCGGAGGTCTGGACGCCTTGGCAGAAGGTCGCGAAGAATTATGATGAGAAAATCTTCATTCATGCCACGTTCATGAATTTCATCAACTAGTAAATGGCTTACACCAACTAAGTCTGGCTCCTGAACCAATCTTCTAAGTAGAACTCCTGTGGTGCAGAATAGCAGTCTGGTTTGTGCAGATCGTTTCGATTCAAGGCGAATCTGGTATCCAACGGTATCGCCAAGCTCTTCACCCCTCTCAGATGCTATACGAGCTGCAACCGATATGGCAGATATACGGCGAGGCTGAGTACATATTATGCTACAATCAGCACCACGAAGGTTATCTATCTCCTCTTCTAGTATGAACTGTGGAAGCTGTGTTGTTTTACCACAGCCTGTCTCACCAGAAATTACTAGAACCTGATTGGCTGCTACTGCTTTTAAAAACTCCTCTCTCATTTTGAATGCTGGTAGTTTATCCCTAAAAGATTGCATCGACCTAGCACTTGGCATCATCTTCCTTGAGTTCTGTATATCCCTAAGCTCAGAACTGAGCCTTTCTTTATCAATATCTTTTGTTGATTCAGTTACTGACGAAGATGTGCTTGGCCGAGATTGCCTCGTTGTTAGAGTAGATGTGCTTGCAGAATCATTACTATTTGACTTTGCCTTGGCCAAAAGGCTCTCCACTCGTCTCTCAGTCTCATTAGACATCCTAATCTCTTGTTGTGTTGATCCATGTCTCTCATCAAGGTCTGCTCGATAATCAGGTAGTGGAACTTTGCTGAAAACAATTGTCTTCCCTTTGTTGTACACATTGCTATAAGTAAAGCCCTTGTCTCTGAGCCATATCTGCCAGTATGTTTTGTCCATCACGCCCAAAATTCCGCTTAACAACTAGCTCCTGCTGAGACCCTTCTCTTAATTGTCTTATCTTGTTCCACCACTCGTTCTCATCGACCTTTTCCACCTCGCCGGCCATCTGCCGGAGCCGCTCGGCGCGCCACTGCGGGTCCCACCACCTCTGCTCCCCTCTCCCACCGCCGCCACGCCCTCCTCCTCCCCCTCCCCTCCCCGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0073900.1 | 10 | 17476749 | A | T |
| Osa10LNT0073900.1 | 10 | 17477360 | C | A |
| Osa10LNT0073900.1 | 10 | 17477366 | A | G |
| Osa10LNT0073900.1 | 10 | 17478612 | T | C |
| Osa10LNT0073900.1 | 10 | 17479234 | G | A |
| Osa10LNT0073900.1 | 10 | 17480740 | A | G |
| Osa10LNT0073900.1 | 10 | 17481509 | A | C |
| Osa10LNT0073900.1 | 10 | 17483416 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa10LNT0073900.1 | DTM_#DNAt_MULE_japo_Os0378 | Chr10 | - | 17480775 | 17481188 | 413 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0073900.1 | osa-miR5526 | Cleavage | 5.0 | 19.872 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR1437b-5p | Translation | 5.0 | 16.464 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR5079b | Cleavage | 4.0 | 18.19 | 1 | 22 |
| Osa10LNT0073900.1 | osa-miR395b | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395b | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395d | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395d | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395e | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395e | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395g | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395g | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395h | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395h | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395i | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395i | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395j | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395j | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395k | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395k | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395l | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395l | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395s | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395s | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395t | Cleavage | 4.0 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395a | Cleavage | 4.0 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR159f | Cleavage | 4.5 | 20.865 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395m | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395m | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395n | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395n | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395p | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395p | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395q | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395q | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395r | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395r | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR1430 | Cleavage | 5.0 | 18.677 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR1847.1 | Translation | 3.0 | 20.179 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR1866-5p | Cleavage | 5.0 | 19.801 | 1 | 24 |
| Osa10LNT0073900.1 | osa-miR395y | Cleavage | 4.5 | 18.389 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR395y | Cleavage | 4.5 | 13.938 | 1 | 21 |
| Osa10LNT0073900.1 | osa-miR5079a | Cleavage | 4.0 | 18.19 | 1 | 22 |
| Osa10LNT0073900.1 | osa-miR5150-3p | Translation | 2.5 | 14.17 | 1 | 24 |
| Osa10LNT0073900.1 | osa-miR5150-3p | Cleavage | 5.0 | 17.239 | 1 | 24 |
| Osa10LNT0073900.1 | osa-miR5157a-3p | Translation | 3.5 | 14.17 | 1 | 24 |
| Osa10LNT0073900.1 | osa-miR5157b-3p | Translation | 3.5 | 14.17 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0073900.1 | 10 | qLVB10-1 | Morphological trait | Panicle/flower | C677 | RM258 |
| Osa10LNT0073900.1 | 10 | Ehd1 | Physiological trait | Flowering | nan | nan |
| Osa10LNT0073900.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Osa10LNT0073900.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0073900.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0073900.1 | 10 | qLSVB10-1 | Morphological trait | Panicle/flower | RM258 | C677 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)