© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0074000.1
GTAGAGTACACAACAATGGAAAATTCATGACCATGTACCAAAGAAATGTTAAAACAACGCTCCTTGCCATAAAATGACGGCACAATGACGTCACGAGAATCCCCTGAACATCTCAGCAATTCATGCACAACGGATTTACTGACGTTCAGGGAATAAGGCTGAACCATTTATCCACAAGTTTGCATGGATGATGGAGAAGGCTTCAGCAAAGGGCATAAATATTCACACCGAGCTTACATTTGCATGGGCCTGTTTCATTTTGGATTTTTTTTTTTTACATGTTGCTATGGTGCTACCAGAAAAAAAATGATTGGAATTCCTCCGATTCATCGTCATCTGACTTTAACAAAAAACCACCAACAAGAAGGTTGAGACACCATTTAATTAGGTAGACAGCAGACAGTCCCATTAGTGCATGAAAAGAGACCAATATCTACCAGCATTCATTTGAGTCTAGTACTAGTACTAGATAAGCTGCTGAATGAACAGTAGTAAATGCTGAAGGATCTTCATGGAGGTCAGGAAACCAAGGAAGGCCTCAGTAAAAGTCTATATAGAGCAATGCAGTCTGCTGCATCAGAAACAATTCTAATGCTTTAAAAATATACATGTGCAATCTGCGAAAAAAGCTTTGGTTGTCAGCATGGCAAGCATCCACAAGTATCCAACATTACCATGCAGTCACAAGAGGTACCACTGGATTACATAAATTTCAAAGGCCTTGGTAGTGAGGGCATCGATAACTTCTCATCTACTGCTGAAGTTCTGATTTGCTGAGACATTTATGTAATTGGCATCAGTACCAGAAATAAAAATACATCAGACTTTTAAGACATGCTGCTTCTCAAGATATACTCATCACATTGTTGCCCTGACCATCTATAAATCAAACTGAACAAAGTTGATCCATGAAGAAATCAAGAGGAATATCATTTTTCAGAAATCTACATAAAAAATGAACTGAGGCTATATATATTGACTGTTAACCAAGTTTTTCTCCAACAATTTCTGACACTATAATCTCCCAAAGGTCATGACTGGAGTTCTGCAATCTACCTTTTCATCAGTGTAAATGAAACATTTCAAAAGACAAACAATAGCTTACAGTTTCTATAGCACCTGTACATACAAGTGTCACCTGAAAGGTTCTACAGGTGCTGTTTCTTCAAGAAGAGCAGCCGCCTGGAAACATTCTGCAGCTTCTGCTGCTGACCGACCACCTTCCTCTTTGTAGAGTAGCCCAAGATTAAACCAAGCCGCATGATTTGTTCGATCCAGTTGCAACGCATCGGTCAGAAAGCACCGGACCGAAGGCAATGGCCTGTTGCCAATTTCTCGAAGAACAGAGGCAGTTGATATCAAACTTGGAACATGTTTACGGTCAAGGTCTAATGCTCTGAAATAGGATCCCAAGGCTTCTTTTGGTTGACCTTTTGCTTCATAGAGTTTTCCTTTAACATGCCAAGCCAAGGCAGAATATGGACTGATGGTCCTTATCTTGGATACACAGACCTCTGCATCCCTCCATTGTGACATGCGTAGGTACAACAGAGCTAGATCATACCAGGTCTCTATTTCCAGGCTTATATCATCCTTAGTGCCCTTTGCCAAAAAGATCCCAGCACTGAGACTTTTGGTTCTGAGTTGAATGACAGCGAGAAGTTTGGTGTATGTCTCAACAGCGTTCCTGAGTTGGCCCTGTGCAGCCTGAATTCTGGCTTTGGTTCGCAATAAATCTCCTTGACTCCATTTCCCAGTCTGATCGAGAGCAGCATCAATAATGGTTTCAGCATCAGCAAACTGTTTCTGAGCAGATAGTATTCGAGCTAAAAGAAGCCAACTCCTCAATTCCGATCCAGCCTCTAATTTCACCAATTTCTTGGCATAAAAGGCAGCAGCATCTAATTTTCTCTGGTCAGCATTTTCAAGGCTGAGACTGTACATTGCACGAGGATCTTTCCCATGCATCTTATTTTCAGCATTTTCAAGCACCTCCAGAGCTTCACACTGCCAAGAAGCTCTCTCTGTATCAGATGTGGCACATCTAGCTTGATTAGAAAGGTTAACTCCAAGCAGCAGGTCTGCAACACCCGCCATTTGTTCACATCCTCCCTGCATATTGGCTATTGCTCTCTGTGCGTAGGAAGCACCTTCAGTTTGGGCACTCCTTTCAGTGCAAGCCTTTGAAGCTAAGAGGAGTTCTTTGAAATTGTCAGAATCATCTCCAGATTTTAATATCCTTTTGAGAAGATTCAGGGCTGTCGAATCATCTTCTTCTGCAAGGTAACACAACGCAACATTGTATGACCACTCTCTTTTATCCAGCATGCCAGGTAACAATTCTTCAAATTGTACAGCTAGTGACTTTAGCTGCCCTGAGATGGACAGAGCAAATGTAAGGTGATGCATTATAGTAGGATCCCGCTCAACCCTCTTGAGATTGAACTTCCTTAATAGAATCATTAGAAGAAGAATAGCCTCTTCCATATTATTGCGAGGTACAAATGAACCATCCAACTGTGAATGAAGATTTGGAGGTCGTGCTTCACAGCCACTATATAGGAGAAAAATGGCAAATTCTTTTTGTATGCGAGCTATGGTCTCTCCATCAAGGTTCCAATTATTGAGAAGAGACCTCCTATATGAAGATATGGCTTCAAGTGAAAATCCCCCTAGTTTCCATAGTTCAGGGAGCAACTCTACAGCCTTGCATATTATTTCGTTTAATTTACAATCTTTTCCAAAGCCTGCTGGTAAACCCTCAGGCACTGCTGCTTCCACGATATCCAATATCATTCTGCATTCTTGTGCAGCTTCTTTGAACTTTCCAAGATCATGAAGAGCTCTTGATTTAAGGTATATGGCCTCCATGAGTAGGCTGACAGCATGCAAGGGCATTGGTGGAGAATCCCATTGTGAACGAGTCTTCCGACGATCCACTTTTCTAGCAATTGAGATTTTCATCTTAGGGACTAAAGCAGGTATATCAATCCCATCAAATACACGAAGTGCTGCTTCTACATGCCCACGCTGGTACTCTAGCCTTCCTAGTAATGCCCTTGCTTCCTCATAGTTAAGGCAAACACCCTCCCGGAGCGACAACTCGGCCTCCTCAATGTTGCCATTATCAAGGTACTGCTCGATCTCTCCGTTCTGGGACGAGTACCCGCTGGCCGAGCAATCTTTGGTGATTGCAGATTCCGGTGACCGGATGATCTCATCTGCCGCCCTCAGCTGCTCCCCGGAGCACAGGCACTCCATTGCCATCCGCCGGACGAAGCCCCTCAATCTCCCCCTCTCAATCTTCCTACCCTCCATCCTTCTCTATCATGTAACCTGCTCTTCCCATCTCGCCACACAATCACCTTCGAGTTCAGCTCCGCGGCCGCCACGCCGCACGCCGCCTCTCGCGAACCTGCTTTCGTCGGCGGAGGGGGAGGAGGAGGAGGCTGCCTAGGGCGGGACCGGAGAAGGAGAGGAGCACCGTTTCCACGCCGCGCGCGCTCCGGGCGGGGGCGGGGGCGTGCTCGCCGGCCGCCGCGAGCGCGTGGAGGCGAGGCGAGGCGAGGCGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0074000.1 | 10 | 17489015 | A | G |
| Osa10LNT0074000.1 | 10 | 17489198 | C | T |
| Osa10LNT0074000.1 | 10 | 17486150 | T | C |
| Osa10LNT0074000.1 | 10 | 17486179 | C | A |
| Osa10LNT0074000.1 | 10 | 17487385 | T | A |
| Osa10LNT0074000.1 | 10 | 17487424 | C | T |
| Osa10LNT0074000.1 | 10 | 17485037 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0074000.1 | osa-miR5820 | Cleavage | 4.5 | 9.165 | 1 | 21 |
| Osa10LNT0074000.1 | osa-miR5829 | Translation | 5.0 | 18.579 | 1 | 24 |
| Osa10LNT0074000.1 | osa-miR166c-5p | Cleavage | 4.5 | 18.696 | 1 | 20 |
| Osa10LNT0074000.1 | osa-miR156l-5p | Cleavage | 5.0 | 11.502 | 1 | 21 |
| Osa10LNT0074000.1 | osa-miR164c | Cleavage | 4.5 | 2.414 | 1 | 21 |
| Osa10LNT0074000.1 | osa-miR395w | Cleavage | 4.0 | 19.304 | 1 | 22 |
| Osa10LNT0074000.1 | osa-miR1869 | Translation | 4.0 | 17.551 | 1 | 24 |
| Osa10LNT0074000.1 | osa-miR1879 | Cleavage | 4.0 | 18.553 | 1 | 24 |
| Osa10LNT0074000.1 | osa-miR1320-5p | Cleavage | 4.0 | 14.896 | 1 | 21 |
| Osa10LNT0074000.1 | osa-miR2097-5p | Translation | 3.5 | 2.451 | 1 | 22 |
| Osa10LNT0074000.1 | osa-miR2099-3p | Cleavage | 5.0 | 12.74 | 1 | 20 |
| Osa10LNT0074000.1 | osa-miR5073 | Translation | 5.0 | 18.678 | 1 | 23 |
| Osa10LNT0074000.1 | osa-miR5161 | Cleavage | 5.0 | 12.278 | 1 | 20 |
| Osa10LNT0074000.1 | osa-miR5340 | Cleavage | 5.0 | 15.412 | 1 | 23 |
| Osa10LNT0074000.1 | osa-miR5491 | Cleavage | 5.0 | 12.912 | 1 | 21 |
| Osa10LNT0074000.1 | osa-miR5491 | Cleavage | 5.0 | 15.111 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0074000.1 | 10 | qLSVB10-1 | Morphological trait | Panicle/flower | RM258 | C677 |
| Osa10LNT0074000.1 | 10 | qLVB10-1 | Morphological trait | Panicle/flower | C677 | RM258 |
| Osa10LNT0074000.1 | 10 | Ehd1 | Physiological trait | Flowering | nan | nan |
| Osa10LNT0074000.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0074000.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0074000.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)