© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0074100.1
GACGCAGAGCAAAGATGATGCTGACGATATGATTTTGTAGTTTACTGTACAATTATACAACAAGAGCTCTTTTCGAGCTGTGAGAGTGTGAGCTACTGAGCTTAGTGGTTCCGTAGATTTATATGCCCTCTGATTTCAAGGAAAACCCCATGAACCCCACTGAAACTTGTAAGGGGCCAAGGAAAAGCCGAAAAGGAAAGTATATATATGTATGTTACTACTCAGTTGTTGCATTTTGCTTCTCTTTTTTTTTTGTGGTCAGCATTCACAACGAAATGCAGAGCTAGGGAAACATCTATTGTCGGGTGCTATCTTTCTAACATTAATCTCGTTCATTGCCCGGATCATTTGTGGGGATAGGTGTATCCTGTCCATCAGGTTTACCTTGGGGGCATCAAGGATTGCCTTGGGTGGAGAACGTGCCCATTGCATTGCCCAAATGGCGAGAGGCCGCATGTAGATGAGCGACCTGTAGTGCCCGTCTATGGTCCAGCCTTCCGGTGTTTGGAACCAATACCCATATCCTTCTTCTGACCAACCAGCAATAAAAATTCCTTCGGCAGTGGTGAATCCTTGATGCTCCATTCCATGGAGCAGCATGTTTGCAGCAACACCGTATGTAACACCGGTCCAGATTTCCCGAGATTGCATGCATGTCTCATCCACTTTCCCATTAGGAGTCATACCATTTACAGCTCCCAATCGTCCTCCTTTAACCTTCATTACATTGAATTCAAATATTTTCTGCAGAGCACTTCTTATTTTATTCTCATCGAAAAGCGGGGGCAAGCCTGAAGAAGCAGCATACCACTGCCCTGCCAGCTGATCCGCCTGAATAGATCGGCTATTACTGCTTGTGCCACTGTCATAATTGAAGTAAGACCCATTCCATAACTTAGCCTCATATACTGCTTTCGCTTGTATGAATTTGAGCTTGTATTTTTCAGCAAATGGCCGATCACCAAGCCGATGAGCCATTGTAGCTGCAGCCTGAAGTGCAGCAAGCCAGAGACCGCCACAGTAAGCACTAATTCCGTGTACAGTCCAAGCATCATAGGTTTGATCAGGAAACCCATCATTCTCAATGAGACCATCACCGTCACGGTCAAATTGATTCATATAGTCCATCACTGCACAGACGGCAGGCCAAACATCTCTACCAAATGACATATCACCTGTAGCAGCGAAGTCTCTGTATACCTGGAGCACAAACTTTGGATTTAGATCTTTCCATTTGCTTGTATCATGTATGTTGTACGCATTCATTTCATGCCATGGATCATGTGTTCCTAGGTCATGCGGAACGGCACCTTTGACCTTGCGAATTCCAGAAGTACCATCAGCCAAAAATTTCATTCTTCGTCTGTCTTCATAGAGAACAGCATTGGCAAAATCACGTTGGATACTCAACTCTATTTTGGGAAACAGATCAAGCAGAGCAAAAGAAGCATAGAAATGCACATCATAGGTGCACCACATGATGTATTCCACTCCTTCCAGGTACAAAAATTTGCCAACATTTTCAGGGCCATTCTTGGAAAGCAAGTATGGAATTGGCTCTTGTGACCCAAGTCCGTTGGTTGCCTTAGCCATTTGTGGTCCATGTACTGCTGCATACTTTGACACACTTTGCTCTTCGCCATTAGCCAGGTCACCACCATTAGTGACTTGCTCTGCTGTCAGTTTGACATGGTTATCTTTAACTGATTCCTGTTTAGTGTCTCTAGTGCCCCTTTTTGAAGATTTCTGTTGATTAGAACCAGGACTTGGTTTTTCATCGATAACTGGTGGTTGGCCATCTGTCCAAACAGTACCCCCAGCTACCAGAAAGTAAAGCTCATTAAAAAGTGTGAACTTGTACCATTCTGGAAGTTTTTCATTCTTGAGTATGGGGTTTTGCCACTTCTCAATCTCCTCTTCCCAAATCCTATATTTTGTCAAGGCATCGTGTACCAAATTAACAGCTGATCTTTCAGAAGTTCCATAAAATTCAGTGTACCTCCTGTTGTATGTGCAGCCCTTCTGAAACTTTATTTTAGGAGAGGACCAAGCCAAACCAAATACAACAGTACATCTACCATGTGGCTCTACCCAGGTTGATGCTGAGACAGCTGCACAAAGTGTCTCCCCTGAAGATGAAGGCATACTGGTACCAGCTTCGAAATTTTCACGGTCAAAGTGGCCGTTCTGTTTCATTCTATCCCACATTTGCTTGGCTGAATCATGGCCTTCTCCAGAGAGGCCAAATACAGGCAAGACTGTCACATTCACATTCTGAGTTTCACAGGCAGCAATAGCAAAAGTAACCGGAGGATTATCCTTTGCTGTTTTGTGATGCAGAAGAACTCCTGAAACTCCATCCTCCGCAATGAAGGGCTCATTAAAATGGCCTCCAGAGTGATGAGAAAAACCTCCGATAGAATTCGCCCATGTCATTAACAGGCTCACTTTCGCACGGTCTTTCCCAGTGTTCACTAGCTATAATAAACACAGAAAACAAAAGGAAGGATGGTCATGTAATTTCATCAGGTTGAGAAGATTAAGAGCATCTCTTCATGTAAATACATATGAAAACTTAATGGGAACATTCAATTCAGTAGAATATTCATTAATCAGTAACTCCTCAAGTAAACAGCATGTCCCATGATCTAAGAACAATCACTGTAATTAAACATTTTTCTATATAACTGTATTCTGAAATGTTTTGACATATATGTTCGCACCAACAATATTATTTTAACAGTGACCATGTTAAAATTCTCCTGTCGACATAAAAAGGCAGGGCTCTCTCTACCTTATGATCCATGTCAGAACTGTTACATGTGGAATATCTTGGCTGAAGTTGCCAGAACATATTTCTTAATATAAATGTTATTGAACCAGTATCAGATTCAAGCAAGAATTAGAGCGAGACATGGTTAATCCCCTAGTTCCACAAACCTAATCCCAACTGTTATCAACACCGATCCACATGTATATTCCATGATATTATCTAAAGGAATATACTTATCAGGAAATATGAAATAAAAAAAGATGAGGGAAATATACCAGCTGAAGAACCTGCCAGCCTAGCATAAAACTAACTTTATGAGTCACTTACAGTGTACACAAAGACAGAAGTTGGGAGGCTGCTATCTTTGTAATCATGAGGAATGAATGGTGATATCTGACGACATGAGATTTTAAGGTCTGGATCCGGTTCACCATCATAAACAGTCCATGCCCTAGGAAATAAAGCATGATAGGTAGAATGTTGACCGCTCAAGTTCCAGTCCCATGAAGAAATTCCAGAGTCATTACATTTCTTTAAACCTTCATGGTGTCCGGGAGACAATACCGATGAGTACTTTTTGTTCCCCCCATCGCGAGATACAAATATTGAAAACTGGTTCTCCATGACCGGGGAAGTCTCACATAAACCAGGAATGATATGCCAATTCTTGAACTCTCCCCTGAAACCTCTTGAAATGCTACCACTCCCCATCCCACCAAGCGGTACGCCCTGCGAAGCAGACGGCTTACATTTCTCTTTGGTAAACGGATCAATTGGAGCTTTCCTTCCATGAGAAGCCTCCTCTCGGACATACGACCATAGCCTCAGGCCAAGGCTCATCATCCTCATTGCTTCCATGAAGGTGACGCTGAATTCCTTGAGTAAGTTGGCGTGGCTGTTCAGACGCCGCCGCCATGCCTGCTCCGGAGGCGACCCGCCGTCGAAGTCCAACAACTGCAGGGCGGTTCGGCCGACGTACTCCTCGGCCGGCCACGAGTTCCTCCGGCAGTGGAAGAGGTTGCCGCTCACCATCCCGTCTCACCCCCAATGCCACCACGCCCCCGATCCAACTCCCGCCGATCGGAGGCACGATCCACGAACAAATCCCCTCCCGCGCCGCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0074100.1 | 10 | 17584743 | G | A |
| Osa10LNT0074100.1 | 10 | 17588270 | A | G |
| Osa10LNT0074100.1 | 10 | 17588776 | T | C |
| Osa10LNT0074100.1 | 10 | 17590622 | A | T |
| Osa10LNT0074100.1 | 10 | 17590636 | G | A |
| Osa10LNT0074100.1 | 10 | 17590144 | C | T |
| Osa10LNT0074100.1 | 10 | 17585222 | A | G |
| Osa10LNT0074100.1 | 10 | 17589126 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0074100.1 | osa-miR812v | Translation | 4.5 | 15.988 | 1 | 24 |
| Osa10LNT0074100.1 | osa-miR812v | Translation | 5.0 | 21.693 | 1 | 24 |
| Osa10LNT0074100.1 | osa-miR6256 | Cleavage | 4.5 | 15.577 | 1 | 22 |
| Osa10LNT0074100.1 | osa-miR169a | Cleavage | 5.0 | 18.736 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR171a | Cleavage | 5.0 | 19.737 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR169b | Cleavage | 5.0 | 18.736 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR169c | Cleavage | 5.0 | 18.736 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR169r-5p | Cleavage | 4.5 | 18.736 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR444b.1 | Cleavage | 4.5 | 23.242 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR444b.1 | Translation | 5.0 | 17.922 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR444c.1 | Cleavage | 4.5 | 23.242 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR444c.1 | Translation | 5.0 | 17.922 | 1 | 21 |
| Osa10LNT0074100.1 | osa-miR2878-3p | Translation | 3.5 | 16.939 | 1 | 24 |
| Osa10LNT0074100.1 | osa-miR1863b.2 | Translation | 3.5 | 15.16 | 1 | 23 |
| Osa10LNT0074100.1 | osa-miR5076 | Cleavage | 4.0 | 20.622 | 1 | 22 |
| Osa10LNT0074100.1 | osa-miR5340 | Cleavage | 3.0 | 14.31 | 1 | 23 |
| Osa10LNT0074100.1 | osa-miR5507 | Cleavage | 4.5 | 17.038 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0074100.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0074100.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Osa10LNT0074100.1 | 10 | qLSVB10-1 | Morphological trait | Panicle/flower | RM258 | C677 |
| Osa10LNT0074100.1 | 10 | qLVB10-1 | Morphological trait | Panicle/flower | C677 | RM258 |
| Osa10LNT0074100.1 | 10 | Ehd1 | Physiological trait | Flowering | nan | nan |
| Osa10LNT0074100.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)