© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0078400.2
TTGAGCACAAGAACAAGAAAATTGGTAGCTTTTATTCAGTCGCTATATCCTTGGCCAGAAGATCAGTAATTGCTGGAACAAAGAATCGAGTGTGTATATATACGTGAAAAAAACAATAGCCTACAAAGTGTAGAGTGAGATGAACTATATGCTACCTACTTCTTACACATAATTCACCCAAAAAAAAGCTACACTTATCAACAATTAGGATATTAGGTTGGACCTGCATAAAGGCCAGGGTGATTCCAGTGGTCATATGAACCAATAATTTTACTCTAACTTACAGTGATTGGTCAAAAATGAGTTATTTCTTAACCTTGCAGTGAGAATCTCCACTGTTCACCAGGGCCTCAGCCAAATTTACAGTCCTCTACTCTTTGGGGTAGAGCCTTTAGTACAGTCAGGGGACATCATTTAGTTCTGCACTTGCTTGCAATTATTCAGCTTCTTGCAATTTGTAGCCGCCAAATTGATTTCATTCTTCCTGTACTGTGTGGGCCTTACGATTATGGCACGCAGTAGTTCCCTATCTCACTAGAACCACCGTCCCTTTTTTGCATTTGCTGTTTTGAGCTCCATTACTAATTCTTCACGCTGCGCCTCTACTTCTGCATACTGCAAGCTCACGTTGAGTAACCGTTCTTGCATATCTTTCAGCTCTGACTCTAGTTGTGATATCTTGTCATCATCATTCTCTTTGCCATCCTTACTAGCAGATTTCCCCTCTGGCATTGGACTCTTCAGTTGTCCTCTATACAATTTATTTTCCTCCAGTGCCTCAGCAAGCCTAGTTTCCAGTAATTGGATCTTTGACTGAAGCTCTGGGACCTCATTAACTGGAGAATCTCCATTTTCATTAGCATCATTACCCTGTTTATTGGTATTTTCATCTTTGTTTTGGCTTGTCTTCAGGTCAAGCTCCTTCTCCATAAGCTGATTTCTCCTTGTGAGATCCTCATTTTCCTTTTGAAGAGAATGTATTTTTTGTTGGTATTCACTGTTAGCTCCCCTGATAATACTTAGTTCACTTTTTAGCTCAGCTTCAAGTACATCTGATGTTTCCTTAACTGGTGGTTCATCTCCTAGCATCACAAGCTTTGTTTGTGCAGAGATTTCAATTTGTTTTCCTTCATTGGCAGCATTCAAAGTGTCCTGCATACATGAGACCTTGTCTGTTAACATCCCCTTTTGTGCCTTTAGTTCTTCACATTCTTCAGACAATGATTGAATCAGCCCTTCCAACTTCCCTTTCTCAAACTTAGCTTCATCAAGAGAACTTTGTAATGTAAGAACTTCATCTTGGAGGCCTGCTATTTTGTGGACCTGGATTTTCAGTACAGAAATTTCTTCAATTATCTGCTGTTTCTCATAATCACTGGATTTGGATTTCAATTCTAGTTCACACAAAGTTTTCCTTAAGTTATCTTCATTGGATCTAGCAGCTTCTATCGATCTTCTCATATTGTCAACATCTGTAGTGAGCATTTCCTCATTCTGTTTGGATGCATTAAGTGAGTCAACTAGGTCTTTAATCTTGGTTTTAGACTCCCGCAGATCTTCCAATTGAGACTCGTAATGTATCATCTGTGCATTGACATCTTCAAGATTAGCCTCAAGTTTAGCCTTGTCTGCTCGAAGGATGGAAACCTCACGGATGGTATCCAATGTGGAACTTTCTCGCTCCTCTTCTGTTGAAGATAACTGTGCAGTAAGACTAATAACCTCCCTCTCAAGATTGCTTAATTCAACAGTCTTTTCTTTCTCAATCTTGTTTAAAAGTAAATGTACACGATCTATCCTTTCTTCATGCTCCTTGTGCTCTTGGAATATATTCTCCAGCTCTGAAAGCAACGATTGCTCTTTCAAAGATATGTCTTCCTGAAGTGAAGAAAGTTTTGCCTCTAGGGACTCCAACGTTTTGCAGAAATCCATGGTCTTTCTTTTTGACTGCTCCAATTCCTGCTCCAGATGTGAAGCATACCCATGCACTTCCAGCTTCTGCTTCTTTAGATCAGCTGTCAGAGTCTGCAGAGATTTGCATTCTTCAACAACATGATCAACTGTAGCCTGCAGTTTTGCATTTGACCTTCTTAGGGCCTCTGAATCCTCTTGTACTTCTGACAACCTTCTGTGTGATTCTAGCTGGTTTTCCTTCAATTCCACCTTTTGAGCTTCCACTTGTTCTAGTTCATCTTTAAGGTTTGTGATAAGTGATCTAGACTCATCCATTTGTAGCTTCAGTTCCACCTTTTGAGCTTCCACTTGTTCTAGTTCGTCTTTAAGGTTTGTGATAAGTGATCTAGACTCATCCATTTGTAGCTTCAGTTCCACCTTTTGAGCTTCCACTTGTTCTAGTTCATCTTTAAGGTTTGTGATAAGTGATCTAGACTCATCCATTTGTAGCATGCTTAACTCCTTTTCATTTGCCAGATAGGTCAACTGAGACTCTAGTCCAGATATGAACTCTGACAGCTCTACATTTTCATGTTCCAGCTTTGATATATGCAACTCTAGATTAACTTTGCAGCTTTCAAGCTCCGTAATCTTTGTTTCGAGAACGTTGTTGGTGGAAACATGGGAATCTATGCTGCTGGTGAGAAGGAGGAGTTCTTCTCGCATTTCATCCAAGCAAGCTGCAGTGATGCTACATTCTTTAAGTGATTCTTCTAAAAGTTCCTCCAATTTATTCTTCTCGTTCATAATTTCAGATATGAAGCTCTCCATTTCCTTTTTAGAATGCTGCAAGCTCTCTATTTCCTGTTCTTTTAGTAGAACTGTACTCCTCAGAGCATCTAATTCGGTTTTGTTATCATTTTCATCGAGTTTTTCACTTTTCAATTTGTAAGATTTTGCACTATCAGTGTCTCCTTCCTCCATCTCCAAGGCGTGAAAACCACTAAGCTTATCTCTCAGATCAGATAGTTCAAGAATTCTGTCTTTTAGCTCCTCTTGGCTTTTTTGGAGCTTTTCTTCTAGTTCACTCGACTCAGACCTAAAACTAATCAACTTCAACTCAAGATCAGCACATTTTGTCTCTAGATATTTTACCTTAGATGTCAATCTGTCAGAAAGATCACCCTCACTGGACACTTCCTCACTGTTAGGAACAGAAGGATCCTCTCCTTTGGCTACTTCACTTACTTCTTTCAACTTGTATATAAGCTCCAGATTTTCATCAGTTAATTCAGAACAGTCCTTCTCGAGTTCTTGTATTTTGACCTTCAAGAAATCATTTTCCTTTTCCAATTCAAGATAAATAGCACCAGAACCTTCACCGTTTGGATTTTCTACATGAAGCATACGATCTATTTTTTCCCTCAACATCAGAATTTCATCTTCTTTTAGTGACACTTTTCTAGCCCATTCCACATCTTCTTGAATTAACAGATTATTTGGGGAGACCTCATGATCTATCAAATCACTTGTATGAGAAAGGTTAGAAATCTCCGCTCTCTGAACTTCTATTGTTTCTTCCAATTCTTGAAGGATAGAAACAAGCTCTATGTTGGCCTCTTGGGCCTTATTCAGTTGGGTTGCTAAGCTTGCATTCGATTCTTTCAGAAACTGCACATCATCTTCCACTTCTTTCTGGAGCTCAATCGCATCCCCAGATCTGGGACTTCGTGAAATAGTTTGGCGTGCAGTTACCTCTTCCAAAGAACGTTTCAGTTCTTCAATTTCTTGCCTTAGGGAATCTCGCTCAGAAATTGAAATAGAAAGTTCCAGCTCTAGCTCAGACTGTTGCTTAGATTTGTCAGCACATTCTTTCTTCAATGTCTCTAGACCTTGTTTCAGTTTGCGAGTTTTTCTCTGCCACATTTTTTCCAGATCTTGCTCAGAACGTTGCTTAGATTTGTCAGTACTTACTTTCTTCAATGTCTCTAGACCTTGTTTGAGTTTGCGAGTTTTCCTCTGCCACATTTTTGCCTCACCACGTAGTTCATCAATTGTCTCTTCAGCATTTTCAAGGACATCTTTGGATGCATGAGATACCCCTGATGATAACTGAGAAAGATCACTTGCAGATGGTTGTGCATTATTACCCTGCAGCATGTTTCGAGATGGAGTTTGAGAACTGAATGATGAATTGTTTGATCTACTGGCCTCGTCAACATGATCTGCACTAACATGGATGGCATCTGGACTAGCAAAATTATGCCTCTGCGTATTCAATTCATCATTCAAGTTGTCACTAGGAGGCATGTTTGTTCTATCAGTGGTACTATCTCCAGAATAAGACCTTGATGCTGACAAACTTGCATCCCTATTTCCAGCTTCATCTTGATAAGAACCACCTAAGTCATTTCCTGACAAAGAATGAGTAGTCCTATTCAGCATGCTGTCAAAGCCATCTGATGTGCACTCTGTATCATCATTGGTTCGACTTGTTTTAGACTTTGCTCCAAGACATTGAATGTTAAGCTGTAGAATTGTTCCAGAATCGCATCTCTTCAGTGGCAAAGAGATAGCAGTAGATTCTAATGAACTAAGATAGTTAGTCAGATTTAGGAAAACTTCCCCGAGGATACCACTGTTTGTTGATCCCTGCACTGACACTCCTGAAATTCTTCAGACACTTGATCTTGGGAAAACCAAATTGATTCCAGGATGGAATCAGGCCATTGACAGGCTCCACTAAGTGCAGCGGCTTTAGTGGACTTGGCAATTGTTTTTCCAGTGTCCACTGCAACTATTGAAAGCATCAGCCTGTCTGATACTACTGGAACCTGAACGGCGCGGAAGCCGGAGAACCTGAACTTGACCCGCTCGCGGAGCCGATCCGATGAGCCGCGACGATCGAGCTCCGTCGACATCTCGCCCTCCCTCTCTCAATTCCCCAAACCTATTCGCGCCCAAACGGACACCGAATCACCCCCCGTCCCCAAAGCGGGGCCGCCCGGATCGCCCTCCTCCGCGCGCGCGGCGGCGCGGTGCGGTGCGGATCATCGATTCATGGCCGCCAAGCTGCGAATGCGGAGACGAGGCGGAGCCGAGGATTGAATTGGGGCGCCGAGGCGAGGAAATCGTAGGAGGCGGTGAGGATGTTGGCATCTTTTTTTAGCAAATGAGCCGCGAACTCCTCGTTTTCGCTTCCCCATTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0078400.2 | 10 | 21394843 | T | C |
| Osa10LNT0078400.2 | 10 | 21394585 | G | A |
| Osa10LNT0078400.2 | 10 | 21389928 | C | T |
| Osa10LNT0078400.2 | 10 | 21390256 | T | C |
| Osa10LNT0078400.2 | 10 | 21391386 | T | C |
| Osa10LNT0078400.2 | 10 | 21391665 | A | C |
| Osa10LNT0078400.2 | 10 | 21392075 | A | G |
| Osa10LNT0078400.2 | 10 | 21393192 | T | C |
| Osa10LNT0078400.2 | 10 | 21396737 | A | G |
| Osa10LNT0078400.2 | 10 | 21399137 | A | G |
| Osa10LNT0078400.2 | 10 | 21398694 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0078400.2 | osa-miR5544 | Cleavage | 5.0 | 13.727 | 1 | 22 |
| Osa10LNT0078400.2 | osa-miR5804 | Cleavage | 4.0 | 18.641 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR5806 | Cleavage | 4.5 | 14.789 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR2873c | Translation | 4.0 | 10.457 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR156a | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156b-5p | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156c-5p | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156d | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156e | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156f-5p | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156g-5p | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156h-5p | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156i | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR156j-5p | Translation | 4.5 | 18.899 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR396a-5p | Translation | 5.0 | 12.552 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR396b-5p | Translation | 5.0 | 12.552 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR156l-5p | Translation | 4.0 | 18.899 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR167d-3p | Cleavage | 4.0 | 18.054 | 1 | 22 |
| Osa10LNT0078400.2 | osa-miR171g | Translation | 5.0 | 17.026 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR395o | Cleavage | 5.0 | 17.044 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR395o | Translation | 5.0 | 24.357 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR395w | Cleavage | 4.0 | 17.044 | 1 | 22 |
| Osa10LNT0078400.2 | osa-miR1850.2 | Cleavage | 5.0 | 13.297 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR1855 | Translation | 4.5 | 16.156 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR1860-3p | Cleavage | 4.5 | 19.211 | 1 | 22 |
| Osa10LNT0078400.2 | osa-miR1870-5p | Cleavage | 5.0 | 13.673 | 1 | 24 |
| Osa10LNT0078400.2 | osa-miR1870-5p | Cleavage | 5.0 | 15.2 | 1 | 24 |
| Osa10LNT0078400.2 | osa-miR1871 | Cleavage | 3.5 | 16.549 | 1 | 24 |
| Osa10LNT0078400.2 | osa-miR2096-3p | Cleavage | 4.0 | 15.705 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR2878-5p | Translation | 4.5 | 9.096 | 1 | 24 |
| Osa10LNT0078400.2 | osa-miR1863b.2 | Translation | 4.5 | 17.118 | 1 | 23 |
| Osa10LNT0078400.2 | osa-miR2923 | Translation | 4.5 | 12.915 | 1 | 22 |
| Osa10LNT0078400.2 | osa-miR2928 | Translation | 3.5 | 5.542 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR2929 | Cleavage | 4.5 | 21.848 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR1862f | Cleavage | 4.5 | 8.113 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR1862g | Cleavage | 4.5 | 8.113 | 1 | 20 |
| Osa10LNT0078400.2 | osa-miR5144-5p | Cleavage | 4.5 | 17.306 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR5151 | Translation | 5.0 | 13.27 | 1 | 22 |
| Osa10LNT0078400.2 | osa-miR2275c | Cleavage | 3.5 | 12.713 | 1 | 23 |
| Osa10LNT0078400.2 | osa-miR2275c | Cleavage | 4.0 | 16.616 | 1 | 23 |
| Osa10LNT0078400.2 | osa-miR2275c | Cleavage | 3.5 | 15.132 | 1 | 23 |
| Osa10LNT0078400.2 | osa-miR5514 | Cleavage | 4.5 | 16.439 | 1 | 21 |
| Osa10LNT0078400.2 | osa-miR5524 | Translation | 5.0 | 11.461 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0078400.2 | 10 | nan | Morphological trait | Panicle/flower | RM171 | RM333 |
| Osa10LNT0078400.2 | 10 | qRf-10 | Physiological trait | Sterility | RZ811 | RG561 |
| Osa10LNT0078400.2 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0078400.2 | 10 | nan | Physiological trait | Sterility | RZ811 | RG561 |
| Osa10LNT0078400.2 | 10 | nan | Morphological trait | Seed | RZ811 | RG561 |
| Osa10LNT0078400.2 | 10 | Rf1 | Physiological trait | Sterility | nan | nan |
| Osa10LNT0078400.2 | 10 | nan | Resistance or Tolerance | Drought tolerance | C809 | R716 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)