© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0078700.1
AGTTACGACTTGCTTGCTGCTAATTGAAAGGTCACCAATTGGTTTACAACACAAACTGAGAAGGGGGGGGGGGGGGTTGGTTTGTGAGAAGAGTTTACAAGAAGACAATATGCCTGCAGTCTATCAGGGAAAAGGTAATTCCGGAAACATCTCACGTCTCAGCCCTCAACACGGTAAGCAAGCATATGCAGGTTTTTCACTTATCACAGACAGGTCGGCAGTTCATCCAGCCAATCCATATGCTTACAGCTGAGTCAAGAAATGCGCTACATTGTGGTTGGTTTCACCAAAGATCAGTGCTTCCAATTTCGAAGGGTTACACGTACACGAGTTGCATCAGAGCCGTCCAGTACCTAGAGCACGACGGGTTCAGGTGTATCGCCCTGAGAAGCCACTTCTCTGGGGTTTGCATGGTTTCCACTAGCTGGTTCTGCTGGGAAGTTGCTGCACTTGACTGCGTTGCCAGAAGATGCATCTGGAAATAGAGCTCAGCAGGCCTCAATTCTGGGGGCCATGAGAACCACTCTAGACGAAGGTTTTTCTCCCACTTGGCTTTGGAGCCAAGGCTGCCTTCTGCTTGGGCCAGTAAGAGGGACACAATAGGTAAAGAAGCAAGTGATTTCTGCTGTGCCTTTCTGAGGCTGGAAGCTGCACGGGCTATAAATTGAGGGGCCGCGAACCTCCAAGCAATGTCCATACAAATTGCGCCGTTGAGAAATAAGACACAGCTGTCAGGATCCCCTTCAGCACATGCCTGAGCAATAGCTTTTTCAGCACTTGCAAAGTCCTCATTCCATACTGAACACTGAGCGCATGCTAGATAAAAAAGAGACATCCATTTGGATGCATTGCTACCTTTCCTTTCAACGCATCCTCCGAGATGTATCTCTATTTCATCAGGGGTACCCTCCAGTGAACATATAGATGCAAGTTGCTTAAGTATTACCCAGCCAATTTCAGTATCTGTACGGTTTTGCAGGCATTTCATGTACTCACTCCTAGAGTTCAAAAGATTGCCTTGCATCACATAGGCCCGACACAGTTGCAAGTGTGCAAAGAAAGAATCCACGCTCGAAGAAGTTACTCCAAGAGCTTCAGTAGCTTGAGCAATACAGTTGCCATGGTCACCAGATTGCAAACTAACCTCTGAAGCCACAAGAAGTAACAAGTAGTTCCCATACTGAACCACCTTATTGTCTTGTGAATTGCTACCACTGGAGAGAACTTGCAAAATCAGCCTCTTCAAAATGGTGCAGATATGTTTCGGATACTTTTCTTCACGTGCTTTTTGGAAAAGGGTAAGTACAAGGAGGCGACGTGCATCTTGGTTCCACGGTTCTAGATGAACCCACCTTTGCAGGCGGCATATTGCATTGTATCCGCTTAGGTATTGATCTTCACATGTTGGAAAAGAGAACTTTGGGTAAGAAGTGCAGGTAGCATAGCAAGAAACTGCTGCACATGCTTGAATTTGGTGTGGAGATCTTAAGCCCCTATTGGATGTATATCCCCGGGACAATGAAGTAACCCTTACTGCTTTATGAGAAGCCATCCAATCTTCACTTGACAGTAGCAGAGATCCAAGTTGGTTTCTTACTAAACTGCAGTCGGGATACATGTGTAGAACCTTTTTCAGGTAAGACAGGCCACCATCAACCCTTAAAAACTTGTCTGATTCCCCACCAATAGCATTTCCAAGAGCAATATTTGAGTGGACTTCACTCATGACTTCATACGATGTAAGCCTAGGAGGCATACTCAGCTGGGGTAACTGAAAACGCTTGTTTGGCTGTAAAGCATCTAATGCAGAGATAATAAATTTCAGCTGTGTGCTGTAATTGAGTTGACCAGGCAGTTTATGAATGACCGCAGCTGCAGAGTCCTTCCCAGAGATGTTGTATGTCAACGTGCATATGAATCCTAAAGCTGCAGTTGCACTCTCCTGCTTCATACTCGATAAGTTTTCAGCCAAGTTTCTTGATACTGAAAGAGCTTCATCATGCCGACCAAGTTTCCATAATGAAAGAGCATATATCTGCAATCCGTCATCATTCAGAAATCCTAGAAATTTGAGATAACTTGTTAGCCTGTGTGTTGGATAGCATAAGAAAATAACTTAAAGGAATTTATTTGCCATGCATGGCAATTCAGGAGAAAATAGGAAAAAAAGATCCTTCCATTGCTACATGAAATAAAAAAAAAACCTTGTCTTTTCAATTCTTCGCACTCCCGCACTGCCTCAGTTGCAAGACCAGTCTACAGTCAAAGCAACGGTTAAAGGATAACTGTTCCATAAACATTTGTAAATAATGTGACAGAAAATGCAAACTTATTGCGCATAAAACATTTGAAGTAACATGATCTTTCAGCTGCCTGATATGGATTTTTTTTTGTTGTCATCAAAGCGGATGATAATACTCTTACCTTACATAGTGACCGGGCAAGATTCACGGAAATATCAGCAATATGACATCTGCAGTCTGTTTTGGAGTTGCGCATCATATCTAAAGCAAATTTTGCTTGTCGGTACGATGCAATTGCAGATTGGAAGTCTGATCGCACTTCAGAAACCAAGCCATTTATGTTGTGCGACTCAGGGTAATGAGGTGCCCGTTGAACAGCTTGCCTTACAGCCATCAATACCTGAGGTGATAGAAGTTCACCAGAACGAGCAGCAATTGTTCCAAGACCAATCTGGAACTCTGGAAGAGGAAGTATCTGCACAGCCCGCAAGCAGCTTTCAAAACATTCATTTACTGGCCCATCCCCAGGCTGGTGGTAATTTTCAGCTGACATTCCTGCCCATGGCAAGGCCAGTGAAGGATCAATGCTTCGAGCTCGATCAAATGCTTGTCTTGCCAACTGCTTATCACCTGAATGCCTGTAAATCTTTCCAAGGTATGCCCAAGCTTCAGAGAGAGACATATCAAGATGCAGTGCTCTGATAAAAGAATGCTGTTTTAAAGCTTGATTACTTGACACCGAGCCCAATGTAACCCAAAAATCCTTATTGACTGGTTCCAGTATCAACCCACCCAACGACATTTTCTCTGGCAGTTCCCAAGTTATGGGATCTAGACTATTATTCTCCTCAATGGTATAAATGAGATCAAGACATATAGCAGTGTCATTGTGAATATTAGCTTCCCAGGGAGTGAGATGCAAAGCTCGTTGGTATGAGAATTTTGCACCATTTGCAGCCAACAAACATGTATTTCTCCACTCAAGTACAGTAGTCCTGAAAGTACCATCATCCATACCCCCCTTGATATTACCATCACCCCATGGAAAGCATCTTGCAAGTGCGAGCTGAGCATCTCCATGCAGTTTCCAAACACAGGAAAGGTTTCCAGTCAAAGAAGTACAAACTTTGGCAGCTTTGCATGCTTCCTTCAACAGACTAGCTGCCCAGCCAAAGGCCCCAGTCATTACACACTGCCTTGCCCAAGCAAGCAATGCAGAAGCAAGACCAAAGTACGCGGAATGATTTTGAGGAGCCATCTCCAAGGCAGAGCGGAACTGTTCAACACCCTTTCTAAAATAACCAAGCATTAGCTGGATGTTTCCACTTTCTATCAACGCAAAGACCTTGGAACCATCCAGTTCAACAGCTCGCCCATACGACTTTACTGCTGCAGTAAACATGCCCAAACGGTGGTATGCCAGACCGAGTGCTTCCCATAAATCTGCACATGTTGGGTAACCTCGTATTGCATACTGAAGGCTCTGTATAGCCTCTGACCATTTCTTCTGATGAACCTGTAAGTACCCCAACCTCCGGAACGCCCAAAATGCCCGGGGTGACTTGCCAGCTGCCTCCTTGCACAAAGCGATCTCCAAGCTTTCCTTGCCCTCCAAATCTAGCAAATCACAGACCGCCTCCCCAGCCTCGGCATCATCAGGGTTGAGCGTCGCCGCCCGCTGATAGCACTTGGCCGCTCGCTGCGCGTCGCCGGCAAGCGCATAATGGTGGCCGAGGAAGCGGAAGGGGACGCCGTCGTTGGGGTCCAGCTTGGCCGCCGCGAGGAAGCGCTCGGCCGCCGCCGCACGGAGCCGCCTCACCTCCTCCTCCTCCTCGCCCTCCTCCCTCGCCGCCGCCTCCGCGCGGTCCCATAGGAAGACGCCGAGGTTGTAGTGGTGGAGCGGGCTGGATGGCTCGCCGGCGAGGGTTTGCTCCAGCTGCTTGCGGAGGTTGGCCTCCGCCGCCTTTTCAGGCATATCGCCGGCGAGGTCGGGCGACCGCCGGCGGCGGCGGCGGCGGCGACGACGGCGGCGTGGTGGAAGTGGGGGGGATGAAGTGTGGGGAAAGGAAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0078700.1 | 10 | 21448831 | C | T |
| Osa10LNT0078700.1 | 10 | 21445928 | G | A |
| Osa10LNT0078700.1 | 10 | 21446197 | C | T |
| Osa10LNT0078700.1 | 10 | 21447700 | A | G |
| Osa10LNT0078700.1 | 10 | 21448004 | T | C |
| Osa10LNT0078700.1 | 10 | 21449502 | T | C |
| Osa10LNT0078700.1 | 10 | 21449571 | G | A |
| Osa10LNT0078700.1 | 10 | 21450532 | T | C |
| Osa10LNT0078700.1 | 10 | 21451259 | T | C |
| Osa10LNT0078700.1 | 10 | 21452331 | C | T |
| Osa10LNT0078700.1 | 10 | 21446718 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0078700.1 | osa-miR5834 | Translation | 4.0 | 18.342 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR818f | Cleavage | 4.5 | 17.196 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395b | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395d | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395e | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395g | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395h | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395i | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395j | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395k | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395l | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395s | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395t | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395t | Cleavage | 5.0 | 18.025 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395c | Cleavage | 4.0 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395c | Cleavage | 5.0 | 18.025 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395a | Cleavage | 4.0 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395a | Cleavage | 5.0 | 18.025 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR172a | Cleavage | 5.0 | 23.452 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR172b | Cleavage | 5.0 | 23.452 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR172c | Cleavage | 4.0 | 23.452 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR172d-3p | Cleavage | 5.0 | 23.452 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR528-5p | Cleavage | 4.5 | 16.729 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395m | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395n | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395o | Cleavage | 4.0 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395o | Cleavage | 4.5 | 18.025 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395p | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395q | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395r | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR1427 | Cleavage | 4.5 | 24.463 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR169r-3p | Translation | 3.0 | 20.433 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR810b.2 | Translation | 5.0 | 11.564 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR1850.1 | Translation | 4.0 | 10.461 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR1866-3p | Cleavage | 4.0 | 18.962 | 1 | 22 |
| Osa10LNT0078700.1 | osa-miR1882a | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1882b | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1882c | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1882d | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1882e-5p | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1882f | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1882g | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1882h | Cleavage | 5.0 | 18.488 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR2092-3p | Translation | 5.0 | 14.289 | 1 | 22 |
| Osa10LNT0078700.1 | osa-miR1863c | Cleavage | 4.5 | 12.415 | 1 | 24 |
| Osa10LNT0078700.1 | osa-miR1863b.2 | Cleavage | 4.0 | 11.608 | 1 | 23 |
| Osa10LNT0078700.1 | osa-miR395x | Cleavage | 3.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR395y | Cleavage | 4.5 | 18.238 | 1 | 21 |
| Osa10LNT0078700.1 | osa-miR5072 | Cleavage | 4.5 | 20.89 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0078700.1 | 10 | nan | Physiological trait | Sterility | RZ811 | RG561 |
| Osa10LNT0078700.1 | 10 | nan | Morphological trait | Seed | RZ811 | RG561 |
| Osa10LNT0078700.1 | 10 | qRf-10 | Physiological trait | Sterility | RZ811 | RG561 |
| Osa10LNT0078700.1 | 10 | Rf1 | Physiological trait | Sterility | nan | nan |
| Osa10LNT0078700.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | C809 | R716 |
| Osa10LNT0078700.1 | 10 | nan | Morphological trait | Panicle/flower | RM171 | RM333 |
| Osa10LNT0078700.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)