© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0006200.1
GTCATAAGAACCACTTCTCTTCATATGGAAACGAACCATTTCCCCCATTCCCTTCGTTTTGCGTATTTACAAAAATCACAACCATCATGTAATACCCACCTCGCCTTTTTACGCGAACAAATGAGCTGAAAATTTTCCACCAAGCAATTACTTTACAGACAACAGGCAACTCAATGTACATTGGCAAGTCGACAAGTCATAAAATGGCAAGAAACTAGATAATGCTATTGGGACGGTCTCAACAGGCTTCCTGACGCAGACAAGCTTCTGACTGCCACTCTCACCGCACCAACAGCACCAAGCTGCCATACCTCGGGGGTCAGCCCATTAAAATCATACTTTGCACCCTCATCAAGGTGAACCCACACGTGAAATGCTACCTTGCCCGATGCATTTCGTATAGGAGATATATGTAGAAGATCACGGAACGAGCTTCCACCTTTCCTGTAGTTTAGTAGATGAACCGTGCAAGCTTGCTCAGAACAAATATGTTGATTTATCTGTTCTAAAACCTCCACACTAGTGCCAGGACCATTCAAGAATCTGCAGTTACAGCCCAAGATTTCTTCTCTTGAGTAACCTGTTAGTGATAGAAAAGCATCACTAGCATAGATGATCGGCATGTCAGGCAAATGGGGGTCAGTCCTGTGAATCATTTCAAAATAAAACTGCTCTCAATTAATAAAGAGGGAATGAAATGCATATATTTATTTTGAACACGAGATATACGTCAAAACAACAACAATACAAACAGATTATGCAAATAACTCACAATACAAAGCTTTGTTTGATTCTACCAAGAGAAAGATTTAATGAAGAACTGAGTGCTGGGATGCCAACAGAATCACATCTCTTCCCGCAGACCACTAGACCAGTGAGTTTGCTGTAGCGGTTCAACGCAGAGAAGATGCTGTTAGCTGTACTCAGTGCTTTTTCTTTCTCATGTTCGCTAGCTACCCGCGGTTCCTCAGCATCCTGCCCTCTCTTATCCACATCCACGAACACCTCCCCCGCGTGGCTCGCGCAGGGGCACTCCTCCTCCACCCTGGCCTCCTCGCGGCACGCCGCGAACACCACGAACGGGCGGGCGGCCCGGCACGGCGGCGTGCGGCGCCGGGACGCGGGCGGCGCGATGGGCACCTGCACGGCGAGGAAGTGGAGCACCCGGCCGTCGGAGGCGTGGAAGACGGGCGCGAGGTGGAGCAGCACCCAGTGGGCTTCCCCGTCGCGGCGGTAGTTGAGGATGGAGACCTGGTGCGGCCGCTGCCCGCGCACGGCCTCCCGCACCCCGGCCACCGCGGCGCGGTCGGTGTCGGCGCCCTGGAAGAGCCTCGCGTTGCGGCCGAGCACCTCCCGCGGCGGGTACCCCGTGAGCGAGGCGAGCCCCCTGGAGGCGTAGACGATGGGGTGGCCCGGCATGGCCGGGTCGGTGAGGATGAAGCTCCCCGGGAGCTCGTCCAGCGCCTCCACCACCCAGTCCGAGTACCGCGCCGTCAGCGACGCCGCCAGCCTCCGCTCCTCCGCCTCCGCGCCCTCCATCGCCGGCTTGGACGCGGTGATCGCCGCCTCGCGCCCTCGCCTCGCCGTGGGGGAAAGTCAAGGGAGGAGGAGGAAGAGGAGAAAAGATCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0006200.1 | 1 | 4581270 | A | T |
| Osa01LNT0006200.1 | 1 | 4581476 | G | A |
| Osa01LNT0006200.1 | 1 | 4581805 | T | C |
| Osa01LNT0006200.1 | 1 | 4583243 | A | C |
| Osa01LNT0006200.1 | 1 | 4583441 | C | T |
| Osa01LNT0006200.1 | 1 | 4583525 | G | A |
| Osa01LNT0006200.1 | 1 | 4583799 | T | A |
| Osa01LNT0006200.1 | 1 | 4583987 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0006200.1 | osa-miR395u | Translation | 4.5 | 12.368 | 1 | 21 |
| Osa01LNT0006200.1 | osa-miR444a-3p.1 | Translation | 5.0 | 23.794 | 1 | 21 |
| Osa01LNT0006200.1 | osa-miR444d.1 | Translation | 5.0 | 23.794 | 1 | 21 |
| Osa01LNT0006200.1 | osa-miR2097-5p | Translation | 4.5 | 17.625 | 1 | 22 |
| Osa01LNT0006200.1 | osa-miR2106 | Cleavage | 5.0 | 18.707 | 1 | 21 |
| Osa01LNT0006200.1 | osa-miR5487 | Cleavage | 4.5 | 14.545 | 1 | 21 |
| Osa01LNT0006200.1 | osa-miR5518 | Cleavage | 5.0 | 11.072 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0006200.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0006200.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0006200.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0006200.1 | 1 | ph1.1 | Morphological trait | Dwarf | RM220 | RM272 |
| Osa01LNT0006200.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0006200.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0006200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0006200.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)