>Osa01LNT0006300.1

GTATACAGTCTTTTTTTTTAAAGAATACAGTCGTTTCCGGTCTAGCTTCTAGCTACGGCACAAAGAAGAAACACAACAATGTAGTTACACAAAAAAATTTCAGAACCATAGTCTTTCACATATTTTAAATCCGGAGGTCATGATTTCGAGCACCTTGTAGGCGGCAACAATTTATATCTTTGGTATCTTGCATATCCCACTGCCGGCCATGGCGACGACCGATAAGCGCGCTCTGCTGGCCGCCGAGAACGGCCATGGCGGCGGCGGTCCAGTCACCGTGTCGTTCAACACCAATGCCATCGTCCTGCTCGCCCTCCTCGTCTGCGGCCTCGGCGCGGTCGCGCTCCACGTCGTCCTCCAGTGCGCGCTCCGCGTCACGCCGTAGGCTGGGATCCCTGTCGTTGGCTCGCCGGCGCCGTTACCGGGAGCGGGAGGCGTCGAGATGAGATCGATTGGAAGGGGAAGAGGCATGAGGTCGATCGACCCTTCAGGAGAGGACGAGAAGCTAACC

Explanation	CPC Score
noncoding (weak)	-0.969082

Transcript ID	Chromosome	Locus	Ref	Alt
Osa01LNT0006300.1	1	4712645	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa01LNT0006300.1	osa-miR6251	Translation	4.5	8.578	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa01LNT0006300.1	1	qFLL-1	Morphological trait	Culm/leaf	RZ543	RG532
Osa01LNT0006300.1	1	qFLP-1	Morphological trait	Culm/leaf	RZ543	RG532
Osa01LNT0006300.1	1	nan	Resistance or Tolerance	Lodging resistance	R1944	C955
Osa01LNT0006300.1	1	ph1.1	Morphological trait	Dwarf	RM220	RM272
Osa01LNT0006300.1	1	nan	Morphological trait	Root	RM7383	RM243
Osa01LNT0006300.1	1	nan	Morphological trait	Root	RM7383	RM23
Osa01LNT0006300.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	R886
Osa01LNT0006300.1	1	nan	Physiological trait	Source activity	RG532	RG472
Osa01LNT0006300.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	R886
Osa01LNT0006300.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	RM5
Osa01LNT0006300.1	1	qTNSP-1-1	Morphological trait	Panicle/flower	RM1	RG532

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus