© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0080800.1
ATCAAACTTCACATTCTGATCTATCCTTTATGTCATACCAGTTCGTTTGGGAACTAAAACACCATAATCACACAAAATGCAGAAGCCTAATACCATCACCAGACCAGCATCTCTAGCAACAACCAGATGCATAGAACAGTGAAATAAACCAAAGGTTTCCATAATTTAACAGCTATACCATACTACTACCCTGTCTAAACCCCATAAAGTAAAACACAGCACAAAACTGTACACTCAAATATCTAGAGAAGCAATGAAGTGTTCATGCCAGGTTTCTCTGGCAGAAACTGCTTCATCTCAAGAGCCTGGTTGCTAGTCACTACACCAGGGAGCCCAAGAGACAGAGACAGCGGTCCATCATCTCCTGTATCAGAACCGGTAAGATTATGCTTCTTTGAGGCCATAGAAAGGGACAGTGACAGTAGAGGAGAAGGGCCCTCTTCTTCCTTCAGTGATGTCTTATTCAGATTATTACGAGGTTCTGGGGAGTCTTCATCATCTGAAGATAGGACATGGATCACATGATCCAAGATTGGTTTAGTTGGAGAACAGGGATCTGCTGGAACCCTACCAATATATTGCACATCATCTAATGAAGTATGCTGATCAGCTGGCAAGGGTATCTTGGACAAGCATTTGCTAGTCAGTTGACCATCTCCAAAACTGCAAGTAGAGTATTTTCCCTCAGAGGTCTTTTGCCGTTTGTAGATGGAACTAGAATCAGGCAAAACAAAGTCCTTTAAAACTGAATCACTTGGATCATCAGAAAGCTTTGGCCTGACAGAATGCTGTGGGGATACTTCTTGAAAGGATACGCGTGCCTGTGTATTTGCCAATATCTCATCAGATACTGATCTGGTGGTTGCACCTGTATGCTGCTTAGTAAAGCATGGAACTCCATTCTTGGTAAAGCTCTCTTCCTCCTCCATGTTGTCCCTGCCCGCTGTTCCTTCGCTACCTATTATATCACTTGGATATTCTGGTTTAATGTTGAGGCATTCACGTTTTGAACTTGTGTGAACATGAACTCCATAGGGAACTGCAGTAGGAGTTCCTAACAAAATTTTCCCAGTCCCTGCAGTTTCTGGGAAATGTATTTCACATAAATTCAGCCTTTCAGCCTCATGGTTGGACCTCAACAAAGTCTCATGGTTTACAGATGCACCACGATTCTCCATCTCCGTTTGAACTGATACAGCTGGATCATACAATTCATCAACAGGGCACTCATTCAAATCTATGCCCAAAGACTGAGGCATCTTAGGGGAACAGACAAGTTGATTAACAGGTCCATTAATTTGTTCTAATGGACTATGATTCATCCCTTTGACAAGCAGCTCAGTTGAACTACTTGCCTTTCTGGCATAAAGGACACCCCAAAAGAAAAGTAAGCCATTCCACCGTTGAGTCCTCTCAGGCAGCTTATCAGACGTAAAAATGAGAAGTTCAATGCCACAAATATTTGCTGTGAGGGACAAATCTCCAGCAAGCATGTTTTCCAACAGTTTCCCATATGCTCTTTCATAACTTTCAACATCTTTAGCAAAGAAATAAAGAGCAATGTTATCTTCATTCGGCTTTACTTCCTTAAATTGCAGTGGCCATGAGGAATGCCGTGGAACTTCTACCAACTGAATTCTCTGAGGTAATTGTTTCACTATTTCAAGTACTTTCAGCGATGCACAGGTAGATAAGTGAGCCTGAAACCCATCGTACATTTCAGGAGAGCTTCCAGGTCTTGAAACCTCAAAGGTACCTTGCCAGATGTAAGACTGCTCTGGAATAACTAAAGCCCCCAAAGAACTTCCAACAGTAGAAGATTGATCAACCAAAGCTTGCTGCTTTAAGTTCAGGTCATTCGATTTAGTGTCAGGGCTGTACGGATTTTGTGCCACTAGACAGCCTTGTGGGCTCTCCGGCAAAAGGTCTTCGGAAGCCTGAATCGCCGCTGCACTTTTACAGGAGATGTTCCCATCACTTTCCACAACTTTCTGTTCATACTGTACCTCTTCTGGAGGCAAATCTTCTGAGGAACTTGTTGGCGCAATATCTTGGAAATCAGATCCACAAGTCTTTGAAGCACGTGGAATGGAAAGCACCTCAGGTTTAGTTGACATTTCATTATCGTTATTCACCAAAATTAGTGGACTTTCACATGCACCATCTGTGCTATCATTTTTTATTTTATCCATTGGGATTAGTGGATCTGATGCCTTCACCACACAGGTGTCTTTAGAACAAACAACTCCTGTTGAAGTAATCCCTTGCTCATCACTTTTAGATAAAATGGAGCTATGCTTATTTTCAACAATTCCTGGTTTTTTGCTACTTTTAAGTATGCTTGGTCCAGGCCTCGGGCTGTCTTGGTCATTTCTTGGATCCCCTGATTTTATTGAACTATCAGGCCTTGGAGATGAAGAAATGTTTGGTTTTTGAAGATTAAATGAAGCCCCCCTTTCTAACAAAATTGTTGGTTTCACGGGCTTCAATATTCTCGGTTGTTCATTTTGAGATGAATGAACTGATTGCTTTTGCTTTGATGAACTTGAGCCTTTGCAAATTGAAGCCTCATGCTTAAGAGGCCCAGATTTCATAACTTTCCGGATGGACTCTCTAGGATCTCTTGGTGAATGTTTTGAAGGCTTCAACTTGCTCAACACAGGTTCAGCTAATTGCTTGACCTTTGGTTCATTACTGGAGTTGTTGAAAGATGGTTGCTTTGATAAAAGGCCTCGTGGTGAAGGACCTGGTGTTTTAACATTTGCCAAGTTCCCCAAGGAATATGACCGAGGTAAGGTCACGGAACTATTAACTGCTTGAGACCTCATTGGAGCATTATCAGGCGACTTTATACTTCCTTTGTTAGAGCTTTTAAATGAGTTCTCCCTGGAGAACACATCATGATTCCTAGGGCTGTCCGCCTTCAGGAGCCTGGGAGTAGAGGATAAAGTATTTTCTGCATATCTCTTGCATGATTTAGGTGGACTCCGTACACCATCATTTGATAGAGGTGATTCCATATCAGTGGCAACTCGCAACTTCTTACGTTTTAACAACACTTCTGAACTTTGACTCCTCTTGTCTAAGCTTTGATTCTTCTTATCCAAGCTTCCAGACGTTGGTGTCCTACAAGAGGATTGTCGTGCTTCCAAGCTAGATGTAACAACTTGCAACTTCTTGCGATTTCCCATAATTCCTGAATTTTTGTTCTTCACATCCAGTCTTTCAGCAGTTGGGGTGGCACACTTCACTTGCCGTGCTTCCAGATCAGATGACGCAAGATGCAACTTTTGATTGCTACCAGCCAAGGGATCATTTACTGGAGTGCCACAAGTGATTTGTTGACTGTCCAAATCAGTCACAACAACCTTCAATGTCTTAGAGTTGTTTGTACTTTCTGAATTTTGGTTCTTCCCGTCCAAAACCTTATTCCTTGATGTGCCACCGTTGCTTCTTGTTTGGTTTTCATCTTCTTTAAGACAGCATTCTTCGCATAACCATTCACCATCTGGAACTTTCTCTAACTTCACTCGCATGCAATAAGTATGCTCTGCCCCTTCAAGGCACCTAGTGCATGTAGCCAGAAGATATTCCCTTCCAACATCTCCACATATATCACAAACATTAACATCTATTAAGCCCTCTGAATTCCCAGAGTCCGTCATCACATCATTCTGTGTATTCAACTTTCTACCACTACCTGTATCCATTGAACAACCTTGATTACGTTCTTGTTTATCATTGTCATTCCTATTGACAGCATCATTAGATTGGATGTCAGCATGTTCTAGACTTCCATTTCTTGAGCATGAGGTGCCATTTTCCAGATTCTTTGTTAAAGATCCAGCCTTGATTTTATCCCTATTACTGGTACCACAACTAGTCATCATGCTGTGCCTCTCACCACCAAGCACAGAAGGATCTGATTTTCCTCCCAGTGAACGCTCTACGGTCTTGTTTGAAGAAGCTTTCTCACAAGGTTGGTGAGCTAAATTATTTTGTGCATTCCCAAATTCATGTGTTGGTCTCTTAGGAGATAATCCATGTGATGCACTGAGAGAGGATTGGGTACGCAGCAACCTCTTGGTTGCAAAAGGAGACTCGGCAGGCAATGATCTATCAGATGAACTTCGGTGCATGGCATGAACATCAGATCTCTTCTTTCCTGTAGATTCTTCGGCGCAGTAGTTTCTTAGTCTGTTAATGCCATTGTCCTTATAGTTAACAGTAAGGTCACGACTTGATGCTGATGTAGATAGTTTATCCTTTTTCTTGTCTAACAGAAGCTTGCTTGCTGCTGATACTCCAGTAACACATGAGTTGCTATCATCATGGCATTCTACTATAGGTGATCTAGAACCGTGATTTACTAGCCTTCTACGTTTTGCTGGCTTGTCAACCTCGGAATCTGCTGCAACAGATGATCTTGCGATGACTTTATTTTCACCATTTTCAGAATAGGAAGCAGGGCTTGAAGTAGCACTGAATTCATCGTCATTTTCTCCCCCCTTAGCCTTGGTACGGAGCCCTTTATCAACACGAACAAACGAACTGTTTTTTGTTTCTGACCTTGCAAAGCATGTTTGAGATGATCCACAGTCCATATTTGAATCCGTGAGTGCAATATTTCGGTGTAGGCACGAGGAGCAAGGAGCACAACAGACATTACAAGTGCCAGATTCTGTCTTCACATTAGGACTGTCGAGTGGTACTGGTCTTTTTCTTGCTGTAAGCTTGTCCTCCATCTTGGCGACCACTTCCCGATGCCCCGGCCCCTCCACCCGTCGTCCACTGCCACGCCCCTCCACTGATTCCTCGGGGAGCGCGAGATCCTTGTGTCGCGTGCGATCGTAGAGATCCCTGACGGTGCGCTCCTGCGGCGCCCTCATGCCCCCACCCCAGCTCCCCGCCGATCGGGAACCCCTCCCCCTCCCCTCCCTTATTACCTCCCGTCTCCGCGGAGCACGGCGGCGAGCGGCTCCTCCAGCATGGCCGCGACGCGGTATCTATCTAGGGCTCCGGCGGCGGATAGGGACGGGAACGGATGCGCGCGGTGGTGGGTCGGTGATGGCGTGGAGAGGAAGCACTTGCGCCGCGGCTGCGTAGCGGAGAGGAAGAGGAAGACGAGAAGAGCAGAGCCCGAGAGGTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0080800.1 | 10 | 22699521 | A | G |
| Osa10LNT0080800.1 | 10 | 22699619 | A | G |
| Osa10LNT0080800.1 | 10 | 22699836 | T | C |
| Osa10LNT0080800.1 | 10 | 22699958 | A | C |
| Osa10LNT0080800.1 | 10 | 22701103 | A | G |
| Osa10LNT0080800.1 | 10 | 22703183 | C | T |
| Osa10LNT0080800.1 | 10 | 22703234 | C | T |
| Osa10LNT0080800.1 | 10 | 22703336 | A | T |
| Osa10LNT0080800.1 | 10 | 22703591 | G | T |
| Osa10LNT0080800.1 | 10 | 22704551 | G | A |
| Osa10LNT0080800.1 | 10 | 22706940 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0080800.1 | osa-miR812q | Translation | 5.0 | 14.468 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR812q | Translation | 5.0 | 9.505 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR812r | Translation | 4.5 | 14.468 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR5143b | Translation | 5.0 | 3.873 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR5337b | Cleavage | 4.5 | 16.639 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR5512b | Cleavage | 5.0 | 12.663 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR7692-5p | Cleavage | 4.5 | 22.147 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR156c-3p | Translation | 3.5 | 16.581 | 1 | 22 |
| Osa10LNT0080800.1 | osa-miR156f-3p | Translation | 3.5 | 16.581 | 1 | 22 |
| Osa10LNT0080800.1 | osa-miR156g-3p | Translation | 3.5 | 16.581 | 1 | 22 |
| Osa10LNT0080800.1 | osa-miR156h-3p | Translation | 3.5 | 16.581 | 1 | 22 |
| Osa10LNT0080800.1 | osa-miR166b-5p | Translation | 5.0 | 13.357 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR166d-5p | Translation | 5.0 | 13.357 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR396a-3p | Cleavage | 3.5 | 19.399 | 1 | 20 |
| Osa10LNT0080800.1 | osa-miR396b-3p | Cleavage | 3.5 | 19.399 | 1 | 20 |
| Osa10LNT0080800.1 | osa-miR156l-3p | Translation | 3.5 | 16.581 | 1 | 22 |
| Osa10LNT0080800.1 | osa-miR159a.2 | Cleavage | 5.0 | 21.814 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR171c-5p | Translation | 5.0 | 16.718 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR171c-5p | Cleavage | 5.0 | 15.666 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR418 | Translation | 5.0 | 18.838 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR528-5p | Translation | 4.5 | 20.926 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR1850.1 | Translation | 4.0 | 24.724 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR1850.1 | Translation | 5.0 | 11.604 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR1861c | Cleavage | 5.0 | 21.762 | 1 | 22 |
| Osa10LNT0080800.1 | osa-miR1846e | Cleavage | 5.0 | 20.229 | 1 | 20 |
| Osa10LNT0080800.1 | osa-miR2095-5p | Translation | 4.0 | 14.839 | 1 | 22 |
| Osa10LNT0080800.1 | osa-miR396f-3p | Translation | 4.5 | 19.126 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR812o-3p | Cleavage | 4.5 | 16.461 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR5143a | Translation | 5.0 | 3.873 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR5162 | Translation | 3.5 | 24.274 | 1 | 24 |
| Osa10LNT0080800.1 | osa-miR5337a | Translation | 5.0 | 23.185 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR5495 | Cleavage | 5.0 | 20.014 | 1 | 21 |
| Osa10LNT0080800.1 | osa-miR5512a | Cleavage | 5.0 | 12.663 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0080800.1 | 10 | Rf1 | Physiological trait | Sterility | nan | nan |
| Osa10LNT0080800.1 | 10 | qTGWT-10 | Morphological trait | Seed | RG561 | RM228 |
| Osa10LNT0080800.1 | 10 | nan | Morphological trait | Panicle/flower | RM171 | RM333 |
| Osa10LNT0080800.1 | 10 | Qbph10 | Resistance or Tolerance | Insect resistance | RM484 | RM496 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)