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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs
Sequence

>Osa10LNT0081100.1

GAATCGATACACATTTTCAGCTTGCATATTCTATGGACAGGTATGTTACAGTGTAAAAAAAAACAAAACAACAATATGCTTTACATTCTCAAGAAACTAGCATGAACTCGACCTCTATGTAATGGAAAACTGTACAGGCTATGTACTGGCACTGCAACGCAGGCCTCCTGCCCCAAGTTGCGAGTAATGTATGGGTGAAACTGTATTTTGCTGTTGTAGCAAGTCCCCTTTGTGGCGCTCTGGCCTGTGTGCGAAATTGCTAGGCCAACCAAGCCAAAGAATAAAACTTGAAATGATCACACCGCTAATGATCTGAGCTTAACGTGGTTCATTTCGCACGCTATGAATGCTGATAAGAATGCCGCCCACTGGGATTTGCAGGAGCCGATGGTAGCGCTGGAGCTGTAGAAGGTAGCCGGACCAAGGCAGGCTGAGGTGGTGGTGCAGTAAGGGCGTAGGTCAGTCTTGACGATGAGCTCTCAATGAGCCCTGCAACTCCAGCAGCAGAAGACTGTGCATTGGATGGGAGGAATAAATCGTGCTTCTGGTCCTTGTAAGCACTCCATACATCAGAAGAATTCAGAATTTCACGAACTTTAGCACAGTGTGCGCCTTCCGTTGCAAAAGCATGAAGCACCTCCACTGCCAAAACACGCCCAATTGAAGCCTCTGATTCATTCCACTTCATTTGGTTACACAGTCCCTGCCTGCCACCAGCTCGCCAATCAAGAATACCAAGCAGTACTTCAACAAGGCCAACCTTTAGCCCCTGTGCAACAAGTGCATCTCTAGCCCGATTGCCAGCACCAACAACACGCTTTAGTGTCTCTAGTGCCAGTATACTTCCACCTTGCCATCCAATTGCTTTCATAAGCAATGGAACAACCTGAGGAGTTCCTGCACTTGTGGCTGCCATAGCTTCTGCACAAGTAGTGCTGGAAGCCAGCTGATGCAGCACTCGCAAACAACTAAGCCGGACACGTTCTTGTGGAGTCTGCACGGTAGAGTCCGCCGAGTTCTCTTGATTGCTAGGTTCCGCTTGCAACCTACTTGTGGTTTGTCCGGATGCCATAGTGTCCCGTCTACCCTCATATGCCATAGCTGAAACCAGCTTTGGAACATAACCTAGGTAACCAACATGGTCTGCAAGGGCTGGATGAACACGCAACAATGAAACCAATGCAGCAGAAAGCAGCAACGGAAGCTCTGGATCAACAGCATTCGCCTCATAGTGTGTGGCAGCAACTGATGAGACATACTGATCTAGCAGCCCTTCTAGGAACCTTTTAGGGTTTCTCAATGGAAACTTGGGATCCTTTAGGAAGAGTCTCACATAAATACCTCCAACCTGTGGCTCATCCTTCATTACATGCTGGCCAGATGCTTGTTCAGGCACATCCCAATCAACAACACGCCCTTTCATCTGCTCTTGGTAGAGGTCTGTGGCCATGGTTGACAACTGCGCAGAAAGAGAAGCTGCCATTGCGGGTGTCCATACAAGTTCAGGGGTTTCTGTGGTCTGTTCAAGACATGAAACAACAGCTTCACCAGGCCCATCTCTAATTGCAGAAACCAAACCATCAGGTAAGAATCTAGCAAGTGTGATTGCCACCCTGGGACCATGCATTGGCTGCCCAACAAGTTTGCCCAATAATGATGCAGCTGCAGCTCTTTGCTGCATAGGGATTTCCTCTTCAAGTGGTAACATAAGTTCTAGAATGTACACTACACCACCATGCTTGGCAGCAGCCCAGGCCAGCTCCGGTGTGCTGGCTAAAGAATAGAGGACAGTAAGGGCTCCATCCCTGCAAGAACGATTGCAGTGCAGTATCTGGAAAAGCAAAATGAGACTTGTTCTTTCTGCAACCATGGCTTCCAAACAAGGCGCATGCTTCGTCAGGAGAGAAAGAACGCTTAGGCAAATTTGTGGGATGTTGCTTTCAGGAGGAACAGGTAGCGCAAGACATTCAAAAAGAGGTGTCAACCGTTCCTTGGAAGCAAAAACAGCAGCCAATCCTGGATTACTGGTTAGAAGATTCTGTAGTGATGTTAGCCCACTTCGGAGGTTCATAATCACTTCAGAATCTCCATCTGTTACTCCTCTATTGTGTTTTTCCAATGAATCTTCTTCTTTTCCTTCATTCGTTGAACCACTGATATCACCATTTTCAGTGACTGATGTCTCAATAGCTGTACCACATTGATGCATCATATTTTCATCCAAACTTAATGAATTCCACTTCTGTACTAGCTCTGCTATAAATTTAAGCAGCGCGATGCAAAAACCTTCCTGGTCACTTATTTCATAATCTGGTTGGTTGTTGTAAACTCTCAAGTACACATTACCAACATTCAGTTCTTTTGATAAAGCTTGGTATGTGAAACAATGTGATTCCGTCAAATCATATGAACCATCAGGTCCTTGGCTAGCACGCTGCTGGTCTACAAATTTGAGGAGCTCGCCTCTGGTGGAAGAATTCCATATGATCTCTGGTGACTCCAAATTTGCATTCAGATTTGACAACAGTTCTTTAGGTGGGTGGTTTCTCAGCATATCAGCAAGCTTCGGAGTAAGAAGCGCTCTTAGTGCATCAAAAGCAGATTGATTAGATGGGCTTATTCCATCACCACCAAGACCACAAAGCCTTGACAGAGCCTGAGTTGCATGTACAGCATGCAGATTTTTAGCAATCTGCACCCTTGCACCAACACCATGTGCTTCACTTGTTGCATTCTCTTCTGCTGTTGAATCGTACTGAAGCAATAGAGGCAACACATACCATAAAAATCCAGCCGCGAGCAGAGAACTTTGCAATTCTGATGACACTGATATATTAGCAGCTGTTTGCAGTGCAGCATCCACAGCCGATGGAACAAATTCAAGTTCTGTACTGTGCACAATATCCTCAACAAGGCCACCAAACTTAAGAATCTCAGCCCTTCCTGACTCAAACTGGCTGAGAACCGCAAATGTATGCATTATGTTGGTGACTATTCTTGCTGCCGGTTCATTTGCTGGGGTTGTGGGCTGAACAATGCACATGCAACGAGAAAGAAGTGTTGCCAACAATGGGATACCACCATCCCGTATGAGCTCTTCGCCATTTAATGAAGATGATGCGCATGTCAGCCAAATTAGCTCTGAAGCAGCTATCAAAAGAGGGGCTCTCTCAGATGAAAGAAAATTGCTATCATCCTTATCTACAGTGACTGCATTTAGCAACATTGGATAACCAGCATACTTGAATGGTTCCAAGACATGTCCATATCTCTTGTACAAGATGCACTGTGCCCTGAGTAAGAGTAGCAGCCTCCAAACTTGTGGTCCCTGCAGTCCCTGCATACTTGCCTGCAATCGTTCGTAAGCCTTTTGCACAGCAACAAACTTTTCTCTTCCCTCAGGATTCTTATCTGGATGGTATTTTATTGCCAGCTTACGGTATTGGCGCTTAAGCTTCTCTTCGTCAATGTTTTCAATGTTGTTTGTCAAATTGCCCGAACTTAACTCAGATGACTGCTTGCTACTGCCGTTCTCACCAAGGACAAGATCATCAAGAGAGATCTCCAGTATCTTACAAGCATCTTCTTCAGATAGATCCATTGGACGACGAGTTAACTCTTCACGCCACATTGCCAACAATGACTGCAAAAACTCTACATGTTCAACAATGGGCCAGTTAGGAAACCTAATCTCGTCACATAGGTTCCGGAGGTAGTATCGGTGGCACCACATCTCATCTTTCAGATTCGGGTAGGTCACAGGTGGCATAGGAGCATAATCATACAATGAATGACAATGTTGAGCCAATTTCTGAGGAAAGTCACCGAGATGCTGCAGGACCTGACGAATTAGATGCTCCGCCCGCATCTTGTGGGTCCATATAATCTCTGGCGTGTCAGAATCAGACACCATTGCGGCAGCAAAAGCTGAAGGTCCACTGCGTTCTAAGACATACAACAATGATTCTGGGAGCAGTCCACCTAGTACACTGCGCTTTGCCAAAGGCAATGATGAAGATACTGCTGCCTCTTCACCACCATGAAATGCCTGATGAGTATGTGTGGCTGAAAAGAGTTGTGCGATCGATAGGAGATTTGAACCGGGATATGCCAATGCAAAGTAAAAGGCACCGGTACTATATAGTCGAATCATAGCTTTGGGGTTTCTTGTGACAATAGCCTTAAGTAATGAGGCAGCTGCTTCAACAATGCTTGGTTCCCCAGTAAGCATAGCCTGAGCAACATGAGGAAGGCATCTTGGACTTGACAATATACGTTTCACCCTAGGAGTTGGTGTCACTATCTCTCCTGCATCATCAAGATCAGAATGTGCAGATGCCATACTGTGTAATATAGACAATGCAGCATCCCCAATCTGACTAGGAGTAAGAACAGGCACTTTAACAGCAAGTGCCCAACGGAGTTCCCGGATATCACGTAATCTTTTCCAGTCAGACATACCAGAAGCCCAACATTTGGTGGTCCAATCAATTGACTTCTTTGACCATAGCCTTCTGATAGCATCCTTTTCTAGAGGGCCAACTTGTTTACCGTCTTTGTCAATATACATCCACTCTTTCAGAGGTTCCATAAATGCAGTTGCCGCGATCAGGTTAGACTGCAAAGGAATAGCTGTCCGCTCAGATGCTTCATGAGCGACAGTTAACATATCAACAGCCAAAACACATCCTCCAACCAAAACACACACTTCAACATTTGAAAGGTCGTTCATCAAGGCCTTTAACAGTAGTAGCAAGCGATGTCTTAATGCCCTATCATCTGTTCTGTCCAAGAGAACAGTAATATGTGCTGTGCCATCGAAAGGTCCAATAACTTTGTTATGTTGTTCATAAACTATAGCCATTGCCCTTGAACAAAGTTCTCTTACAGAAGAACCTCCTCCCCCACCAAAACCATCCAATCTTCCCAAGTCACACCAATCATCAGATGAACCCAGTTCATCAGGGACTGCACCATCCACAGTAAGACCAATGTCTGCATCGCACAAGAAGCGGTGATACAGAGCTCTAAAAAAGGCAACAGGATCACGCAGTGGGAAATCCTGTGCTCGGTAATTGCTTCCACTTTCAAGAAGAAGCCGCAGATAGTATTGGCCCACACAGACTTCTTTGGACAAGCTAGGGTAGCTAACTGAAAACTCAACATAATTCCATGAAATTCGTGGTAAGGTTTCACTATCACTGGCATCCTCAGTGACTGAACTTCCAGGGACAATGTCATCAGTTCGTTCTTTCTCAACATCAAGGCTATGAACTTCAGCTTGCAATGCCTCCCTTAATTCTTGTCTAGTGCGTTCATTCCATATCAAGTCTGCTCTATTGTGATCAAGACTGAATGCTCTCCAAAATCCATACCAGTTGCACAGTAGCCTGCCAGATCCAACAGGTGTGTTTTCCACCACAACCTGTGCAGGGACTGAAAAATCTAAATGTGCAGAGTTAGCAAGGTCACCATTGCCATTGGAGTCCACTAAATAAGCATGTGAATCCAGCTGTGGTGCCCCAGTTTGATGATTATTTTCATAGAAGGCCTCAGGTACAAAACCATGTGGAACTGCCTGAGAAGGATCAATACTTATGCCTGGAGAAGGGGTATATGCAGTAGGGTACTGATTAGCATGCCTCTGATGGACATCTGCTCCAAAGGGACCAACATTGGTGTGCCCAAAAAAATCCCCTTCATTGTTATTTGAGGGCATCCCTTGTTCTGGTACAGCCATACTCTTGCCACCACGGGACCTCCTCTGCTGAAGTATCCGTTTCTGCCTTCTGCTTAATGGTACTTCATCATACTGGTTCTGAGAATCTTCATCTGATCGTGTGTGAAGATAAGCAACAAGTCCAGGGGGAAGTATTCTTGACAGCAAATCCAGTGCAGGTTGATAAGAATCAGCCCAGAGAGCAACAAGCTGTCGACTAACATCACGTCGCTCACCAGCAGGGTAGAAGAAAGCATTCAGTAAATGCCTCAGAAGAGCACCATCCTTCAAGGCAGCATCACGCATGGACTCTGCTGCTATTGCATCTTCTTCAGCAATTGTACGCATAATAACAGAAACAGTCTCCCTCACACTTTCAGCAGGATGGGCAAATAATGCAAACAAACGACGGCGCAAACCAGCGACTTGACGTAGTAGCTCAACAAATGTAGCATGTTGGGTTGTTTCACCATGGGGTTCACAAAGCATAGCTTCAAGGACTTCCACAATGGACAATGACAGTAATGGTGAAACTGATAGTGGCCTTAATCTGTTAACAAGGATTGGAACATAGACTGGTTGTGAGAACAGTACAGACTTTGCATGCATGTAAGTAGCATGTGACTCTCCCCTTGTATCCGTTAACATGGATGTATCACCAGGACCACCACCAATTAGCATAGCCACAAGTCCAGCAGCCTCAGCTGCTACTCCCTCTGAACCATTTCTAAGCAAACCCATTATTCTCCCTACAGCCACAGGAAATGCCATCACGTGTGCTGACACACTTCTTGATGTGAGGAGCCTCCGTAAGCATGCGACAAATCCCATTATTGTCGCTGCTGCTTTTGGTGATGGAGGTGGAAGAGGAGGAGCATCAGCAGGAAGGTTCTGCGGTGTAGCTGGGAGAAGACTAATTAGAGCCATTAGGACCACTTCAGGTACTTCAATATTGACGGGCACTCCAGTATAGGGTATGCATGCATTGAACTCCCTTATTCTACGCCACAATCTGATTTTTGCTCCAGGAACAGTGTCGGATGAAACTACAGCCTCTTTAGCAACAGTAGCTAAATGTTTTATGTGCATGCTAGCAGCTTCCATATCAACAGTGTGATGGGATATGTGAACACGGGCTACTCCACAGGGTGGATCTATGCGATGACCAGGCATGGTCAACCTTGGTAGCACTGGAATGGCACACTGGCTCTGGTTTTGTAAAACATCAAGAACTGTTGCAAGTAAACTATCACGGGATGTACTTGCATATACATGAATCGGGCAACCATCATTGAATTCGAATGCAAACATCTGCGGTTCTTCTGCAAATCGCACAAGGGCACTTACTGTTGAGAGAGGTCGAACAATGATAGCCTCATAATTCTCCGGTCGTCTTTCGACAAGTGAAGTGTTTGTAAGAACAAGCTGTCGAGAAACGGAATCACCATGATCTCCAAGTCCCCCCCTTGGTCCAATACCCAAGCTCAAGCTCTCAATGCTAGCAGTGCCATGTGCAGCAGGACGCAATCTTGTTACTGACCATTCTCCATGCCGAGTTTCAGCAGCTCCAACAGCCTCGTTTGCTCTCTTTGCTATGAAGTCAGTAGCTGTCATTGACTGTGAATTGTCCACATGTAGTGATACTCCAACCATCGAGTTGGCTGTTTTTGTCAAATATGATATAATCAGAGTGTTTGTACTGCCTGAAGCAGCCATAAATGCTTTGGACTTCCTCCCATAAAGGGGGCATAGCACAAAACCTCCTCCTTCAGCAGTCCTCTTCCCATAGCTATCCCCCAAGAGAATGATAGCAGGAGAATCCATATCTCTAAAGTCCAAGCACCAGCGCAGATCACCAGAATGTCCTTCAAGGAGCTCAATGCCCACTGAAGTAACCTTGAGTTTGAAGGGCGCCCACTCGTGGGTGCGGCGGCGGAGGTGGAGGACGGGGAAGTCGAGGACGGGGTGGACGGGGCGCAGGCGGTGGAGCTCGGTGAGGATCCCGGCACGGAGCGGCGAGGAGAAGCGCAGGGCCTTGAACTTGCCGCGGGCGTCGGTGCGGAGGGTGAGCGTGAACTCGGTGGCGTTGCCCTCGGGCGCGGCGCGGTCGAAGCCGTAGGAGGCGTCGTAGGAGTTGGTGACGGCGAGGGTGGCCGGGTCGAGGGTGACGAGGCCGGAGGAGGCGATGCAGAGGATCCGCCTGTACCTGCCCCTCCACGAGTGCTTGACGACGAAGTACCTGGCGAGGTACTCGGGCTCCTCGGCGGCGGCGGAGGAGGAGGAGGAGGCAGAGGAGGCGCGGGGCGAGGAAGGGGAAGACGCGTCGGGCGCCGGCGGCGGGGCGGAGGCGGCGTGGCGGCTGGCGAAGTCCATGGTGGAGAAGTCTATGCGGCGGCGAGCATTAGGGTTCCACCAGTGGAAGGGGAAGAAGGCTCCGGGCGGCGGGGGCTGCGCCGGGGAGTGGCGCGAGTGATTCGCCCCCAGCGCGGCCGATCTGAGCGACGAGATCCCCCACCCGATCCTGGCCGGCGATCGCCCGTTGGGTGGGTCGGTCGGTGCCCCCGCTCTCCGGCGGCGGCGGCGGAGAGATTATCCTCTTCTCGGCTTTGATCGATCGGATTGATTGCGTTTTCCTCCTCTTCTTCTTCGTGCGATCTCGTCTCGTCTCGTCTCAGGTAGAAATCCTTTCTTTGTTTTTTTTTTAATTTAACAAAAACACATGCGCCGGCTTGGCTAATGCCCTTCTCCTTCGTGTTGGTGTCGTGTCGTGTCGTAGCCAGGAAGGAAGGAGAAAGAGAAAGAGTCCCCTCTCCTTGGCTGTATGCCTGTCTCTTTGGGCTTGTTTTTGCC

Coding Potentia
Explanation CPC Score
noncoding (weak) -0.800061
Genome Browser
Expression
Variation
Transcript ID Chromosome Locus Ref Alt
Osa10LNT0081100.1 10 22869526 G A
Osa10LNT0081100.1 10 22861604 A C
Osa10LNT0081100.1 10 22862855 G T
Osa10LNT0081100.1 10 22863229 T C
Osa10LNT0081100.1 10 22865277 A G
Osa10LNT0081100.1 10 22865324 T A
Osa10LNT0081100.1 10 22866220 C T
Osa10LNT0081100.1 10 22866505 G T
Osa10LNT0081100.1 10 22866516 T C
Osa10LNT0081100.1 10 22867856 G A
Osa10LNT0081100.1 10 22869066 C T
Osa10LNT0081100.1 10 22869577 A G
Osa10LNT0081100.1 10 22871183 G A
Osa10LNT0081100.1 10 22872823 C T
Osa10LNT0081100.1 10 22873335 G A
Osa10LNT0081100.1 10 22875360 A T
Osa10LNT0081100.1 10 22872678 A T
Transposon
Transcript ID Transposon ID Chromosome Strand Start End Counts
small RNA targets
Transcript ID MiRNA ID Inhibition Expectation Score Binding Start Binding End
Osa10LNT0081100.1 osa-miR5532 Translation 5.0 20.745 1 22
Osa10LNT0081100.1 osa-miR5795 Cleavage 4.5 12.155 1 22
Osa10LNT0081100.1 osa-miR5807 Cleavage 4.5 20.386 1 24
Osa10LNT0081100.1 osa-miR5817 Cleavage 4.5 16.776 1 24
Osa10LNT0081100.1 osa-miR5817 Cleavage 5.0 17.021 1 24
Osa10LNT0081100.1 osa-miR5821 Translation 4.0 13.347 1 21
Osa10LNT0081100.1 osa-miR166a-5p Cleavage 5.0 15.557 1 21
Osa10LNT0081100.1 osa-miR166c-5p Cleavage 5.0 15.557 1 20
Osa10LNT0081100.1 osa-miR166c-5p Cleavage 5.0 19.594 1 20
Osa10LNT0081100.1 osa-miR166e-5p Cleavage 5.0 15.557 1 21
Osa10LNT0081100.1 osa-miR167a-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167b Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167c-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR160f-3p Cleavage 5.0 14.996 1 21
Osa10LNT0081100.1 osa-miR166l-5p Cleavage 5.0 22.941 1 21
Osa10LNT0081100.1 osa-miR167d-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167e-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167f Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167g Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167h-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167h-3p Cleavage 5.0 17.301 1 21
Osa10LNT0081100.1 osa-miR167i-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR169i-5p.2 Cleavage 4.0 16.844 1 22
Osa10LNT0081100.1 osa-miR169i-5p.2 Cleavage 5.0 18.251 1 22
Osa10LNT0081100.1 osa-miR171g Translation 5.0 10.934 1 21
Osa10LNT0081100.1 osa-miR166i-5p Translation 5.0 20.557 1 21
Osa10LNT0081100.1 osa-miR167j Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR416 Translation 5.0 14.166 1 21
Osa10LNT0081100.1 osa-miR426 Cleavage 4.5 21.335 1 21
Osa10LNT0081100.1 osa-miR396e-5p Translation 5.0 18.362 1 21
Osa10LNT0081100.1 osa-miR443 Translation 5.0 16.339 1 22
Osa10LNT0081100.1 osa-miR444a-3p.2 Cleavage 5.0 18.55 1 21
Osa10LNT0081100.1 osa-miR1429-5p Translation 5.0 12.976 1 21
Osa10LNT0081100.1 osa-miR444d.2 Cleavage 5.0 18.55 1 21
Osa10LNT0081100.1 osa-miR444e Cleavage 5.0 18.55 1 21
Osa10LNT0081100.1 osa-miR1857-5p Cleavage 4.5 18.913 1 21
Osa10LNT0081100.1 osa-miR1865-5p Cleavage 3.5 19.123 1 24
Osa10LNT0081100.1 osa-miR1870-5p Cleavage 5.0 19.283 1 24
Osa10LNT0081100.1 osa-miR1877 Translation 4.5 19.932 1 24
Osa10LNT0081100.1 osa-miR1882a Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882b Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882c Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882d Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882e-5p Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882f Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882g Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882h Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1883a Cleavage 4.0 11.297 1 24
Osa10LNT0081100.1 osa-miR1883b Cleavage 4.0 11.297 1 24
Osa10LNT0081100.1 osa-miR2090 Translation 5.0 20.133 1 22
Osa10LNT0081100.1 osa-miR2864.2 Cleavage 5.0 13.213 1 21
Osa10LNT0081100.1 osa-miR2873a Translation 4.0 16.311 1 24
Osa10LNT0081100.1 osa-miR2873a Translation 4.0 12.902 1 24
Osa10LNT0081100.1 osa-miR2875 Cleavage 4.0 20.99 1 24
Osa10LNT0081100.1 osa-miR2875 Translation 5.0 18.082 1 24
Osa10LNT0081100.1 osa-miR2876-5p Cleavage 4.5 22.537 1 21
Osa10LNT0081100.1 osa-miR395x Cleavage 5.0 11.951 1 21
Osa10LNT0081100.1 osa-miR5074 Translation 5.0 16.4 1 21
Osa10LNT0081100.1 osa-miR5146 Cleavage 4.5 24.574 1 24
Osa10LNT0081100.1 osa-miR5146 Translation 5.0 23.676 1 24
Osa10LNT0081100.1 osa-miR5161 Cleavage 5.0 13.053 1 20
Osa10LNT0081100.1 osa-miR5494 Cleavage 5.0 15.438 1 21
Osa10LNT0081100.1 osa-miR5505 Cleavage 3.5 12.796 1 22
QTL
Transcript ID Chr QTL Gene Character Major Character Minor Marker Interval1 Marker Interval2
Osa10LNT0081100.1 10 nan Morphological trait Panicle/flower RM171 RM333
Osa10LNT0081100.1 10 Qbph10 Resistance or Tolerance Insect resistance RM484 RM496
Osa10LNT0081100.1 10 nan Resistance or Tolerance Drought tolerance RM496 RM228
pre-miRNA
Transcript ID Pre-miRNA Identity(%) Alignment Length Pre-miRNA start Pre-miRNA end E-value Bitscore
GWAS
Transcript ID Chromosome Locus Trait Value Plus Minus