© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0006500.1
CATAAGCCTGATGTTCTGATAATTGCCTGGAACTGATACAATGTTCAGGGGTTGTGAGTAGTATCAGATAGATAACAGGGATTTATGGTTGGTTTTCCATCGTAGAGGTGAGTACGAGACTACGAGAGGACAGTCGCTGGCTGCCGATTGGTGAGAGTTCCGTGAAGTGCATTCTTTACATTTCATCACATATCCAACAAAATAGTGCATCGCTAAGAAAAGAAGTTCCAGCTAGTTATAGTTTACTGATGGACGATTATGCAGTTATTCTGCCTCACTGCTCATCTGGAGGTATCGCCATCAATTCCCTAGCTTTCCTTGGGTAGCATGTGAGCTGCACCCTGACGATAGCGAGCTTTTGCCCAGTTAGGCCGCATCATTCAGCATTTGTAAGCATCAGATAGAGCACCTTCAGCATCACCCATGAGCAATCTACAGATGCTCCTGTTTGCGTACAAAACTGCAGTCGGTCCGTGAGCAAGCCAGATCATATATTTTTGCTGCAGCGCCGTAATTCTTCTGCTTGAATAGCAAATCTGCCTGTGCCTTCAAAACGACTTTTCTACTCTCCTTCTGATGTTGATCCATTGGCTTTGTATTTGACTTTTGCATGAGCGATATTCCATTGACACTCCAGTTTGGGACATTTGGAATTGAAGAAGTCAATGGAAATAGCATTTCAACTTCTTCCCTGCAATCATGTAATGCAGCGCTCTATTGGCAACCAACCCAAATCATCAGGAATATTAGGGTTTGCTCCAGCCTTCAGAAGAAACTGAATGAAGTTAGTATAGCCTCCTTGCGACGCAGCAAGCATCAAAGGGGTTACAACTGTACCCTTGCCATTAACATCAGCACCAGCCTTTATGAGTAGCTTCATACACTTCAATGATCGGTAGATAAGGGAACTCATCAGGGGACTACCGGCTCCATTATTGACAATTACGTTAGAATGCATCTGCCTTGTGATCCAACAAAATCTTCAGTGTCTTATCCTTGCCATTGTTAGCAGCATGAAAGAGTGGTGTTCCAAGGCCACAGTCTATGTCAACAGGTATTCCTTTTGAAAGCAAGAACTCTGTTACCTTACAGCATCCTGTGCCAGCAGCATGGTGGAGAACTGTGCATCCTCTAACATCTGCTTTTGTTACATCACCACTATGATCAAGAAAATACTCCACCGTAGGAACATCACCAGACTCAGCAGCGGCCATAAACGGTGTTATATCTTTGAGGCGTCCGAGGTTCCCGTCGAAGGCCGCCCTCAGGCCTCAGGAGAGCGCTCTCACCTGCGAACAAACCGAGAAATCGCCATTAGAGCACATGGCCGAGGAGCTAGCAAGCCGATCGAGCTAAGAGGAGATGCGGGGAGAGGGCGTCGGTGGGGCGGCAGTAGACGAACGGAACGGCGCCGCCATGGCTCGCCTCGCCGCGAGGAGGGAGGAAGCTTGCAGGAGGAGGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0006500.1 | 1 | 4762298 | C | T |
| Osa01LNT0006500.1 | 1 | 4761875 | A | C |
| Osa01LNT0006500.1 | 1 | 4762740 | C | A |
| Osa01LNT0006500.1 | 1 | 4763530 | T | C |
| Osa01LNT0006500.1 | 1 | 4764053 | A | T |
| Osa01LNT0006500.1 | 1 | 4764111 | A | C |
| Osa01LNT0006500.1 | 1 | 4764636 | C | T |
| Osa01LNT0006500.1 | 1 | 4765775 | C | G |
| Osa01LNT0006500.1 | 1 | 4765791 | G | C |
| Osa01LNT0006500.1 | 1 | 4766047 | C | T |
| Osa01LNT0006500.1 | 1 | 4766096 | A | G |
| Osa01LNT0006500.1 | 1 | 4766525 | T | C |
| Osa01LNT0006500.1 | 1 | 4767076 | T | C |
| Osa01LNT0006500.1 | 1 | 4767121 | A | G |
| Osa01LNT0006500.1 | 1 | 4767267 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0006500.1 | osa-miR5824 | Translation | 4.0 | 11.829 | 1 | 24 |
| Osa01LNT0006500.1 | osa-miR7692-3p | Translation | 4.5 | 18.255 | 1 | 24 |
| Osa01LNT0006500.1 | osa-miR395b | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395d | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395e | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395g | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395h | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395i | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395j | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395k | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395l | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395s | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395t | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395c | Translation | 4.5 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR399i | Cleavage | 5.0 | 15.346 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR319a-5p | Cleavage | 4.5 | 17.021 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395m | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395n | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395o | Translation | 4.5 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395p | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395q | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395r | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR1850.1 | Cleavage | 4.0 | 20.426 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395x | Translation | 4.5 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR395y | Translation | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR1857-5p | Cleavage | 4.5 | 11.174 | 1 | 21 |
| Osa01LNT0006500.1 | osa-miR5517 | Translation | 5.0 | 13.228 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0006500.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0006500.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0006500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0006500.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0006500.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0006500.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0006500.1 | 1 | qTNSP-1-1 | Morphological trait | Panicle/flower | RM1 | RG532 |
| Osa01LNT0006500.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0006500.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0006500.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0006500.1 | 1 | ph1.1 | Morphological trait | Dwarf | RM220 | RM272 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)