>Osa11LNT0082100.1

CAGCGGTATCATTTGATAAAACCAATTTGCACATAAACAATGTGTTAAACCAAGATTCTGGAGTGGTTACATTTCAGTTTTGTCACAGTATCATTTGGTAATTTATGCCTAATCTAGCTAGTAGAGTGACAGCACACTAGTTCGGAGGCCTAGCAATTGCCTATTAACACCTCACTCAGTTCACTGACATTATTCCCCTTTTTGTTTTGTTTGAGGAGTATACCACGTTAACATGCCAATAATTGCTGCCAATGCTACTGGTATTGTTCCAAGATGAGTAGATTGATCTCGAGATTATGCCTTCCCTCTGATCATCCACGTACTCGCGCGTGCTGCATCTCTAATTACTCCTTTTCTTGCAGTCACTGATCTCATTACCATTTCTAAATCCATCCAAGCAGTGACAGCCACCTCTTAATGCTTCAACAACAGCATCAGAACCAATAGCTTGGTCACATCCTTCTAACTTGTTTTCTAATCCAGCATCATTAGTGGCAACCAGAGTCTCCACACTTGTTGATAATGTTGGTTTTCTTGGAGGATGAGGTTTGGGGTGGTTGTGCTCACCGTTGTATACAATTTCAGCAATCCGGCCATCTGGTGTCATCTCCACCTTTCTCTTGACAGGGCATGTTGGGTGAGTGCACTTGTAGTAGCTCCGTGGGAACTCGCTCCCTTTCACTTGCTTCTGCCCATACTTCCTCCAGCTGTAGCCATCGTAGGACAAACTGTTCTTCGCACTGACATTTGGCTTCCTGACACTCTGGGACACTGTCAAATTGTCCCAACAGGCCCCCTTTCCTGTATCTGCTTTCTTTTGATCGTATGCTGTATGTGTTCCACTGTCTTCTAGCTAAAAAGTTCAGCATGTTGTTAGAAAATGACCATATGATCATGTCAAAGGTAGGTTCAAAATAATCTAATGGACAGATGTATAATTATAAAAAGCATCATTTAAAAGAAGGTGCAAAATTATGTAACTGTCAGAAAGAAAATGAAATTTCTTTCCAGGAAACAGAGAAGTTGAATTTCGTGTCGAACTGACTCTGGTTGCAGCAATTTCTGTCGATGAATTACTCAATGGGTGTGTGAATCGCGTTGCCTTTGGACGCCTTAATATAATCTCCTCCAGGGAAGTAACCCGAGGAGAATCAATAGCAGTGGAGTCTTCCTGGAGCATTGAGAAGGACCTCAATCTGGAAGAAGGCCTGGAAGCCACAGGCTTCACAGCAGCAACCTTCTTGTGGCTTTGCATATCGCACTGGTGAAATTTTTAGCACAGTTTATGTACCAAAGTGAAATGACAAAGAAAGAAGGTAGAATAACACAAAATTTATGAACACAAGTCATGGATGTGCTCCCCTCTGCTGCTACCCAAGTCCCAAAGTCTTGTGCTGTGACAGGCAGACTGGTAGATGCAATCGAAGGGTGAGAAGGAAGTTGAGTTGAAGGGCTGATAAGGAGAGGAGAAAAGGAAGATAGTTAAGGATGCATGTATGACTGTTAGGTCCGGAAGTGGTAGGTAGACTGGCAGATGCCAGATAGCTGCCCTCCTTGCTGCAGTTTACCAAATGCAAATACCAATGACTCGGCTCATCTAACATTACTAGGTAATGTACCAATTTAATCTGTGGATCACAAAAACATAAGATAAGACCATGAGCTCCAACACTGATTCAACCATATACTCAAGTAACTTGCAAGCATAAGCACAGTAGCATTGTTGCATTAACCATAAACAGCAGTAATAAAGAGTATTTGAACTGATGAATTCTGCAAAATGGATTACTACTTACTTACACAAGACCTAGTATAGTCTACATGTCCTTGTTGCAAGCTCAGGGGAAAACAATCACCGCAAGCACAGAGACAATTAAGCTCTCAAGAGCAGCACAGAATGAATCAATAGCTAGGACTGTTGGTTGCTGTTGTTGTTCTATATGGATCACAGAACATAAGGCTATGAGCTCCAACACTGATTCAACCATTTATACTCAAATAATAGGCACAATAGCATTGTTTCATTAACCATAACCAACAGTAAAGAGTATTTGGACCCCAAAATTCTGCAAAAAGATTACTACACAAGACCTGTTCTATTTGTACATGTTGTTCTTGCTGTGCTCACAGAAAACCATATATATAATATCAGTAAGAACACGAAGACTACAAATAAGTTGTGAAAGAGCAACAGCTAGCTAGCACGAATGTTGGTTGGTGGTGGTGTTGTTTTGGATGAGGGTATGGATGAGCTGCAGCAGCTGGGTCCTCATGGCCTTGACGCTGTCGGCGTTCACCTCCCTCTTCACGGCCTCCAACCAATCGGAATCGGAATTGGAATGGCGGGCGCGGGTGGGCCACCAGTTGCAGATGGCCCTGGCCACCGCTAGCACGAAGACGCCGCAGTCGTAGCCGTTTGTCTGCCTGGGCGTGGGGCCCTCGATGAGCGGGATCGCGGAGGCGGGGAGCAGCGGGCGGAGCACGGCGGCGAGGCGGCGCGCGGAGGGCAGGTTGGTGGGTGGGAGGCTGTCGTGGTGGACGAAGCGGGGGCCGGAGACGGCGTTGGAGTTGTCGAGGACAAGGAGGGTCCAGTGGGAGCCGCCCTCGGCGTGGGAGACGTCGGGGTTGTCGTTGACGGGGAGGAGGACAAGGCGGCGGGAGGCGAGGCGGAGGGGATCGGCGACGGCGGCGACGGAGGCGGGGTCGGGGAGGTTGGAGAGGAGGTAGGGGATGGAGGGGGGAAGCAGGAGGAGGTCGTCGTCGGCGTCGTGGTCGGCGGCGAGGTGGGCGAGGTAGAAGGCGATGATTCGGTCGTTGAGGAAGTGGGGGCCACGGAGGATGGTGAGGTCGCAGCGGAACAGCACCACGTCGCCGTGGCTCAGCACCCGCTCCTCCTCTTCCTCGCCGCCGCCGTGTGCCATCGCCGGTGGGGTGGGCGGAGGAGAGGGAGACAAGGGGCTCGCCCGCCGGATTAATTTGCGCGTTCAGGCCAG

Explanation	CPC Score
noncoding (weak)	-0.215237

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0082100.1	11	107527	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0082100.1	osa-miR164e	Cleavage	5.0	13.82	1	21
Osa11LNT0082100.1	osa-miR171g	Cleavage	4.5	15.575	1	21
Osa11LNT0082100.1	osa-miR1846d-5p	Translation	5.0	19.839	1	22
Osa11LNT0082100.1	osa-miR1846a-3p	Translation	4.0	17.08	1	21
Osa11LNT0082100.1	osa-miR1846a-3p	Cleavage	4.5	20.866	1	21
Osa11LNT0082100.1	osa-miR1846b-3p	Translation	4.0	17.08	1	21
Osa11LNT0082100.1	osa-miR1846b-3p	Cleavage	4.5	20.866	1	21
Osa11LNT0082100.1	osa-miR1320-3p	Cleavage	4.5	13.404	1	21
Osa11LNT0082100.1	osa-miR5075	Cleavage	2.5	22.099	1	21
Osa11LNT0082100.1	osa-miR5152-5p	Cleavage	5.0	15.611	1	21
Osa11LNT0082100.1	osa-miR5339	Translation	4.0	22.541	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus