>Osa11LNT0082600.2

CGACTTTCATTTCCATTTTGATTGTAAACTTTACAGGTGTCAATATCATATCATAGGCCAGGACAAGAATTCATCACCCACAGTTTCTGGGCCCTTTTTTCTGGAGAGATTAATTGTGGAGGAAGAAAAAGACCCAAAGCTGAGGGTCATAGTGAGGGGAAAAGGAAAGTACAGCTATTAATCTTGTGGCAGAAAGAAATTAGGGCGAAGAAAAGTTCAACTGTATCCCCGCCTTCCCGAGGTCATAATCAAACTGTTTTAGGATGTGGCAGTAATTCACCTCTATGCGAAATAATCTTGTTGGCACAACTACACCAAATCCTGCAGAACTCCTGAATGTTTGTAGAAACTCAGCAAGAGGGAATTTCCTGAGATCAGGCTCTGTTAGTTTGGCAAGATTTCCAGCTGAGACAAATGCATGGCCATGGATTCCCAGCTCCCTGAGCGGCTTCAGAGGTATATCAAATGACAGATCAGCAAAGGCTGTGACCGCAATGTCACCTCCCCGTGCACTTAGCTCAGGAGAAGTGGAAGCAACATTTTCAGAATTCTCTGGGGTACTGCTTTGCAAGTCTGTCCCCAGCCCTCTTTTCTTGAAACCTAATAGTGATGATGGTCCACCCAAGCGGCACATAAGAGACCTATTGCCACCCAAGTAGAACTGCTCTGAAAGTGGCGATATAGAGCCCGTCGATCCCCTTGCCAATGGGTGGATGATCCCAGCAGCCACTCCAGCATTAAGGGCGCCATTCAACACACCCAGCGGTAAAGCCACTCGAAGATCAAGTTCCTGTCTAATGTAACGTGCATCTTTGCTCTCTGGTGCAAGGCCTCCAACTTGAGAAGAAAATAGATAAGCATATCCTCGCGTCGGTCGAATTCTTGAATCTCTCTGGTCAACCTTGTATGCATATTTAATAGAGGACAAAAGGCTATGCCCTAACTGCCCCCTTATGGAATTGGATGACATCAGTGCTCGGTCTGTTATAGTTCGCCATGACAGATTGTAAGCGAGGTTATGGTTCATGGTGGAGAGCAAACCAACAGAAACACCCATCATGTGTTCTCTGAGTGAGGACTTCAACCAGTCCTCAGAGAGAAATGATATTCGAGCTACCAGTGGAGTAGGTATTGCTCCAATTCTTGGTATTGCCACTCCAGTACTTAGCTCCACTGTCTGATCTAATCCAAGATCACCGGATGCATCCCATGTCTCACAATATCCAAATAGGTTCTTCAACTTCACTGAACCTTGAACCGAACATGATCTAGTCCCTTTGTTAGCGAAGATGCCGAGTTCGCCGGCGGCGCGGCCACGAGCCTCGGCGACGTCAACAAGGACGATGACGGCAGCGTTACCGGGGATCCCTGGCGGCGCGGCGTCGAGGGTGATGGACACGGTGTCGAAGGCGCCGAGGCGACGGATCCGATCGGCGGCGGCGGCTGCAGCGCGCACGAGGTCTCTGACGGTGGCGGCACGCGGCAGGTCCGAGCCGACCGCCGCCTCCACCGCGGCGCGGCGCGTGCGGCAGCAGCCCCGGATCTCCACATCGTGCACCCGGATCCGGACCTCCTCCGCGGTGAGGCGGCGCAGGACGGACTGGAGGCGAGCCTCGTCGGACGGGGACGGGGAGGGTTCTTGGTCATCATCGTCCTCCTCGTCTTCGTCATCGAGGTCGTCGTCGTCTTGGAAGTCGTCGTCATCATCCTCTTGCAGGTCGGGGTAATCTTGGACGGAAGCGGGAGAGGATGCGGTGGCCATTGGATGATCGGAAGGGGATCTCAACTGAATTGGGAGACGAAGAAGACGACTCTACTCACTCAAACTCAAGGATGCCTTCACAAGCAACGAATAACACTATCAACTTCCTTTTTTGGGGTAAAATTAAATTTATGCAGAGATTGATGCAATTCAGGAGTTTCACAAGTTTCTTTTTTTAAAGAACAACAAATGCATGATAGAATATGTGAAAAATTGCTACGATTTATATGGTATAGAGGTAATGCCTTTGATACTTTTTTTTTTGCCAATATGCAAAAGATTTGAGTATCATTATATTAAACTGAAGGGAAATGTTTACCACAAACATGAGAAGAAAAGAAACACAATTAAGAAATATATATCTAGCCGCATGAGTTGGTGAGCACAATAGAACGGCAACAACTTTTTTTTAAAAGAAACACAACAGGGGAAGGCCCCCCGTTGTTAGATAAACTTTATTAAAGAAATAAAAAAAGATTACAACATCCTAATCCAGTTAAGAATTACTACATCTTTATCACTTTCATTAAGAAACTAGGGAAGGAGACTTATTCTAAAAAAATATAGCCATTCCTTTGCTTCTAAATATTCCAAGCTCCCAATAGAAAAATTTCCATGAAGCAACAATTCTGAAAAGTGCACTTAGTCTGCAATAGCATATGATCAGAGGACAAAGAAGTGTCCCAAATTATGCCCAAAGAGTTCCAGTAGCTCACCGAAAAAGAGCAAAGAAAGAACATATGCAAGAGATCCTCTACTGATTGAGAAGAATAAAGAATACACAGTAGGTCGCAGTTTGGAGGAGTATAGTGCTTATGATCCAGCATATACTTCGTATTCAATCTATTCATTAAAAGCAGCCATCCAAAAACAACAACTTACTAAGCTCGTATTTCGGTTGATCTTCGTAGCGTTGCCTTAAATGCTAGGATACATCGTCTACCACTGAAATAATAATTAGTTGTAAATGCAAATACTCATGTCAAATCTAGAATTTAAATCCAGGTGGTTGGTTCCAACATAACCAGTTGAGTTACGCTCACTTTCTCGTTGCCTTGATATATGAGAGAACACAAGCAATAGGTATCTTATTATAAAAACCATGCCTTACATTGTCGTATGCATGCTCTAAATTATAATCCAAAATTACGTTTACATTGTGTCATTATCTACTTAAATAACTTCACTAACATGCTTATTGGTACTAATAAGTTACTCCCTCTAGTTTTTTTTTACAAGATATTGGCTAGTTCAATTTTATACTAGCCAGTGTCATACATATAATGGAGGTAGTATATAGTACTTCAAATACACACAACACAAAGACAAGATTACATATGGGTTAAATGCTATTTATTTCCTTTTTTTTCTCACCTTTACAAACCTGCAAACTCATTTCTGCAAAGAAAAAAAAATGAAAATATGTTGCAGAGTATTCCTAATTGCCTACTATGATACAAGAAAAAAGAAAACACACACTGAATTTCAGTTTCAGGCTTTCACACTGAATTTGAGGCCTTAACTGAATTTCAGGCGGTTTCGGAGGAGGCGATCTCAAGCTCCGCCCACCACAGGGGCTTCTCCCTCGGCAATTATCCTTTAATTAGTTTATTTTGCTAAACATTTTCTGCAATGTTCAAATCCTCCAGTACCATCAGCTACAGACTCCGAAATTGTGCCAAGCTCTTTCAACTCGGATGGAGTTTCACTGGAAAACATTTTCTCTTTGAGTAATAAGTTGAGCACTCTGCCAATCACCTTCCCTTCTCCCCGATTTGACAAAGAATCAGTTGATTTGTCTCGCTCGCTCTCGCTATATCTCAAGAGAGCTCTCCCTTCTTCACTGCAGGGAGCACAGGACCCAAATCTCGCAGAGACAAGAAAGAAGGAGAACACTATGAAGTAGACCACTCTAATGGTCCATGCCTCCATTTCTGATTTTCTGTCCCAATCTGAATTTTTAGGAAGAGTTGGAACCTCTTCTCTCTGTGAGGTGTGTGGAGGTGGGGCTAGTTAGCCAGAAAGCTAAAATCATGTTTTGGATTGTGAAAGCACACATGAACATGATTGATGATTCCACAGCACCTCAAGAAAGGTATCACCGTGTAAAGAAGCATCGTCTCGTCTCCCCTCAAAGATTGAATTCTTGCTCTTAAGAATAACAAAAGGAAATGGCAGAAAGAAATGGTAAATAAGTGAAACAAGAGAGTAAAGCAGGACGCTGCAAAGAGTGGAATCAAGTGAGGAAGCAGGGAACCGGACACAATCATAAATCTGTTCTGCAAGGACCAAAAATGTACAGTAGTTACAAAGGAAATGGACAAGAAAGAAGAGCCAAGGAAGGAAAGATACCTGTAAAGAAAGGAATCCAATCCATTCTACGCGTACTAGGAGTAACTAACTTACTGGATCTCTTGGCTGGTATGTAGTTGGAAAGAGAGAAGCCAGAGAATTCTCAAAAAAAAAAAAAGAAGCCAGAGGAGCACACAAAGTCTTGAGCTTCCAGAGAGGAGGAGAGTCGAGCAGTGGCTAAGTCTTGAGGAATAATC

Explanation	CPC Score
noncoding (weak)	-0.934088

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0082600.2	11	290939	A	G
Osa11LNT0082600.2	11	288529	G	A
Osa11LNT0082600.2	11	290578	C	A
Osa11LNT0082600.2	11	290772	A	G
Osa11LNT0082600.2	11	290847	A	G
Osa11LNT0082600.2	11	290879	T	A
Osa11LNT0082600.2	11	291093	C	T
Osa11LNT0082600.2	11	291275	G	T
Osa11LNT0082600.2	11	291548	T	C
Osa11LNT0082600.2	11	292789	T	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0082600.2	osa-miR5818	Translation	4.5	21.259	1	21
Osa11LNT0082600.2	osa-miR169i-5p.2	Cleavage	4.5	7.752	1	22
Osa11LNT0082600.2	osa-miR1425-3p	Translation	4.5	13.42	1	21
Osa11LNT0082600.2	osa-miR1856	Translation	4.0	16.347	1	21
Osa11LNT0082600.2	osa-miR1883a	Cleavage	4.5	19.257	1	24
Osa11LNT0082600.2	osa-miR1883b	Cleavage	4.5	19.257	1	24
Osa11LNT0082600.2	osa-miR2097-3p	Cleavage	4.0	15.626	1	22
Osa11LNT0082600.2	osa-miR1863c	Cleavage	4.5	16.451	1	24
Osa11LNT0082600.2	osa-miR2873b	Translation	5.0	13.586	1	21
Osa11LNT0082600.2	osa-miR5490	Translation	3.5	9.989	1	21
Osa11LNT0082600.2	osa-miR812r	Translation	4.0	15.227	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus