© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0083000.1
GATCAGAAACCTCGAATTCATTTTTTCCCCTTCTTTTCAAAGTAGTGCTCACTAAAGCAGCAGGTAATACATTTCATTCATATCATCAGGCATACACATGCCTAGCTAACAATGACAAATATGAACTAACTATTCTCAGCCCACATACATCTTCCTATTCCAGCTGCCTCTTTTTAAACTGGAAAAGCCAGCCATTCATGTTTCACACCTCTGCAGGTGAACACACTAAGGCTATTGCATTTTGATTCAACAACCGCAGCTTATTCTTCGCCCTCTGCAGGTGAACACACTAAAGCTATTGCATTTTGATTCAACAACCACAGCTTATTCTTCGCTCATATTAGTTGCGGGAGGATCTGAACCCATTGCTGTAATATCTCCAAATTCCTTTGTCTCTGGAGAATTACACACTGCAGAGTTCTTTGGTGTCTCCTTCATGTTCGTAGCTTCCCCATTAGGTTCCGTTCTTGGTGACTCCTCCTTTACGACCCTAGCGTCCACGTCAGGTTGTGGCACTGCAGTGTCACCAGCTGGCTCCTGCTTTACACCCCTATCTTGCTCATTAAGTTGAGAAATTACAGTATCTCTGGCTGGCCCAAGTTCTACACTTCCAGCTTCCTTACAAGCTTGCAGCATTGCAGTATCGATGAATGGCTCCTGCTTTACACTTGAAGCTTCCTCTTTAGGTTGCAGAATTGCAGCATCGATGGATGGTTCCTGCTTAACACTTATAGCTTCCTCATTAGGTGGCACCACTGAAATATCTCTGGATGGCTCCTGTTCTACTCTAGCTTCATCATCAGGTTGCACCAATGCAGCGTCACTGTGTTGGTTCTCCTTATCAGGTTGTACCATTTCAATATCTCTAGGTGGCTCAGCTTCTACTCTTTTAGCTTCCTCACAAGGTTGAAGGAACAGAGTGCCACAAGATGCCTCCTGTGTTATTACTGTTGGCTGCATTAGGACGTCAGAATCGTGAGCATCTCCAGCCACTCTAGCTTCATCCTTTTCCACAACAGCTTGACCATCCTTCTTCATGAATTTCCTCTTGTTCCATTTCTTCTTGAAACCACCTTTCTTTATTTTAAGTGGTTTGGGGGTTTCAATTGGCATTTTCTCTACCTCCTTACCTACCCTTTTACCAGGAACTACAATATATTTTGTCGCACCATTTGCAGAACCCTCTGATTGACCTTGAATTGCCAGAAGAGCAGTTCGAGCAGCTTTTATCTCTGCATCTTTCTTTGTTCTGGCTGCAGCACCAATATATTGTATTCCACCAATCTCTACAGTGCATATGAAAGGAGCTAAGCCTGAGGCTGATTTGGTGCAAATATAAGATGGAATGGCATAATTCATCTTCTGTGCATACTCCTGAAGAAGATTCTTGCACAGCCCAGTCTCTTGCTGAAAACATATTAATATGTGTAAAAAAATGCACAGTGATCCAGGAAAGAGATTATAACACTATGCTAAGTTTAGTCAGCCTGATTCCTAAGAACTAAAGAACATCCAAATTATCTAAATCCTGGCAGTACGAGTTCAGTAGCTATTAAACGACTAATTTCCTATTGTATTCATGGGAATAACCTAGTAGAGTTGTAAGCTTGAGAAAATACAAATAAATCATGACAGAAGACAACAATAAAGACTTTCTGCAATCTCCTACCTGGCCGATCTATACAAATACCCTCCCTTCTTGCTCACTGGGTCCTAACTTTAGCCGACAATCTAGTGATCTACAAAGCCGAAAGCTCTGAGTATTCCTGGAGTTATAGTCCATGGTTTGCCTTTTCTGTCTCTGTTTTTATAATTCTTATGCCGTTCTTCAGATTTCTGAGAATTCAAAACCAACAACTGTATTGAAAGTTTGAAACAAAAAGACAATTACAATGCTTTCTAATAATCATCTACTACAGCAGCAGGTCCCAATAGCCCTTGCTTGCACAATGCTCCAATCAGCTGCCCCAACACTGGTGCATCGTGCACAAATAGTGGCTCCAACAGTAACTCCTGTGACTGTGTGGCACCATCACCTGCCTGCAGCAAGCCTATCAGCTCCGACAATGCTGGTGGATCCCACTGCAGGCCACGCCTTATTGCCTCCTGCACCAACTCCCTCACTGTGCCCATGTCCCCGGCAGACATGCACCCGGCGACTACCACACCAAATGTCCTTACATCCGGTGGGCACCCGGCGTGCTCCATGCAGGTCATCATCTGCCGCGCTCCGGCAAGGTCACCTTTCCTACATAGCGCGCTGATGTACACACTATACACATCCACGTCTGGTACCAGCCCTCTCAGGAGCATTTCATCAAACACCTCCTCCACAGAATCGAACTCCAAGCACTCGCTGAAAGCTTGCATTGTCAATTTGAAGTATGCAAGTGCAGGTGCCACCCTGTTAGAGCCCATCTTATTCTTCATGACCTCATATGCCTCCGCTACCTTTCCCTCCTGCAGAAGCGCATCGAAGACGGCGTGGTAGTCAGATCTGCTTGGGGAAATGCCCCAATGGCACATCTTGTCCAAGAATGCTACTGCATCCTGAGCGGAAGCGTACTGGCACAGGGAGGAGAGGACAGCACGACAACTGGCCAGGTCAGGGTCAAGAAGAAGCGAGGGCATGCAGCAAAGGAGGTCGGCGGCAGCAGCGGGGCGGTGGGCCTGGCAGAGTGTGGAGATGAGGATGTGGAAGGTGGTCGCATCAGGGGAGACTGATGGGGCAGCGAGCAAGAGGACTTTAGGGGCAAAGCGGAGGAACGCTGGGGAAGAGCAGATAGCAGCGAGGAGGGAGTTGAGGGCACGAGCAGTGCGGAGGGTGGAGGAGAAGAAGGTGGCAGCGGCAGCAAGACGGCAGTGGCGTGCAAGGGTTGCCAGAAGGCGGTGGTGGTGGTCAGCTTCTCGGTGCATTTCCCTCAGGTTCAGTTGCTGACTTCCTGTGTTGCACAGGCCAGTCTCTTGCTGGAAAACATATTAAGGTGTGTCAAGAACATAGAATCCAGGTAAGAGATTATAGCACTATGCTAATTTAGTCAGGCGTTAATTCCTAGGGACTCGACCAAAAGAGCATCAAAATTATCTAGGTCTTGGACTCGGAAATGATCACAAAACTTAATATGTGTACTTTGATGTTTGCATTGTTCATGGTTCACAAACCGGGGAAGAGTGAGTTCAGAAGCTCTTTAACAACCAATTTCCTGTTATATTCATATAATACCTGAGTAGAATTATGAGCCTGAAAAGATACAGACAGATCATGACGGCAGATAATAATAAGACCGTGGTGACTGACAGCAAAGCTTTCACAATCTCTTCTATGCAAATACCCTCTCTTCTTGCTCTCTAGGACCTAACTCTATCCAAACATGAAAGCCCTGATTCGTTCTGGAGTTATCAGGTGAGTGGCTATCTCATTCTTCGGATTCGCGCGAATTCAAAAGCAGGCACTGTATAGAAATAAGTAGACTATCCCAACACTTTTACTAATCTTGTACTACACCAGCAGGTCCTCCCAGGCCCCAGGTATTCCATCATGTTGAGTTAAACAAAAACACAAGTAGAGCAGACAGTGACTTACAACAGCTGGGATGTTTGCGTTGGCTGGTATGGACTTGACAATTTCCATGAGGGCAACTTCAGCAGCAGACTGTTCTGCAGCCTTTCTGTTGAAGAATCCGGGCAGGGAGTCATAGCTGGTGTTATTAATCACCACTGTGGACTTGAAGACAGGCTCATGGGAAGGTCCCTCCTTGAAGGTATGATACTCTGGAGTCTGGAGGCCGGCTTTCTGCGCATACTCTTGCAGCCGGCTCTTGAAGACGTAGCAGTTCTCAACCCTGATTCCGGCGGTGGCGCCGTTGGGAGCGGGCGAGGTGTTGGCGGTCTCCGGCGGAAGGGGCGTGGGCGGCATGTCCATTCCCACCTCGCCGCCACCGCCGCCGCAGCGTCGTCGAGAGTCGAGAGAGAAGAGAAGGGTTTTGGTTGTGTGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0083000.1 | 11 | 458536 | G | A |
| Osa11LNT0083000.1 | 11 | 458039 | T | G |
| Osa11LNT0083000.1 | 11 | 458272 | T | C |
| Osa11LNT0083000.1 | 11 | 461310 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0083000.1 | osa-miR5525 | Translation | 5.0 | 18.901 | 1 | 22 |
| Osa11LNT0083000.1 | osa-miR5537 | Cleavage | 5.0 | 10.826 | 1 | 22 |
| Osa11LNT0083000.1 | osa-miR1440b | Translation | 5.0 | 19.005 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167a-5p | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167b | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167c-5p | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR398a | Cleavage | 5.0 | 12.289 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167d-5p | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167e-5p | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167f | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167g | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167h-5p | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167i-5p | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR171c-5p | Translation | 4.5 | 18.179 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR171c-5p | Cleavage | 5.0 | 15.358 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR408-3p | Translation | 4.0 | 21.007 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR167j | Translation | 5.0 | 13.7 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR415 | Translation | 4.5 | 22.745 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR415 | Cleavage | 5.0 | 14.265 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR1425-3p | Translation | 5.0 | 14.931 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR444b.1 | Cleavage | 4.0 | 12.505 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR444c.1 | Cleavage | 4.0 | 12.505 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR1442 | Cleavage | 4.5 | 22.589 | 1 | 20 |
| Osa11LNT0083000.1 | osa-miR1847.1 | Cleavage | 5.0 | 16.809 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR1860-5p | Translation | 3.5 | 22.107 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR1870-5p | Translation | 4.5 | 20.477 | 1 | 24 |
| Osa11LNT0083000.1 | osa-miR1874-3p | Translation | 5.0 | 17.019 | 1 | 24 |
| Osa11LNT0083000.1 | osa-miR1883a | Translation | 4.5 | 15.837 | 1 | 24 |
| Osa11LNT0083000.1 | osa-miR1883b | Translation | 4.5 | 15.837 | 1 | 24 |
| Osa11LNT0083000.1 | osa-miR1320-5p | Cleavage | 5.0 | 8.898 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR2095-5p | Cleavage | 3.5 | 16.774 | 1 | 22 |
| Osa11LNT0083000.1 | osa-miR2096-3p | Cleavage | 4.5 | 20.203 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR2097-5p | Cleavage | 4.5 | 7.937 | 1 | 22 |
| Osa11LNT0083000.1 | osa-miR2097-5p | Translation | 5.0 | 13.264 | 1 | 22 |
| Osa11LNT0083000.1 | osa-miR3982-3p | Translation | 5.0 | 23.393 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR5076 | Translation | 4.5 | 8.647 | 1 | 22 |
| Osa11LNT0083000.1 | osa-miR5076 | Translation | 5.0 | 11.749 | 1 | 22 |
| Osa11LNT0083000.1 | osa-miR5492 | Cleavage | 5.0 | 20.318 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR5517 | Translation | 4.5 | 17.974 | 1 | 21 |
| Osa11LNT0083000.1 | osa-miR2863a | Cleavage | 5.0 | 21.791 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0083000.1 | 11 | nan | Morphological trait | Panicle/flower | RM286 | RM332 |
| Osa11LNT0083000.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)