>Osa11LNT0083200.1

TCCTGAGCGCCTCGACAGGGCCGACAGCCGGGACGGCGGCTCTCTTTCCACCTCCCCTGCCGCGGCTTCCCCATACCGATCTTCTCCCTCGACTGATCCCCATCGCCGGTCTCTCCTGCCGCTCCTGCCGCAACACCTTCCCCACCGCCGGTCTCCCCTGCACCTCGTCCCCGGCGGCCGCCTTGCCAACCGCTCCAGCACGACCTCCCCTACCACAAGAGCGGCCACCAACACCGCTGCCGCCGGCGGCGACATCTGTGAGGACAACAAGCTTCCCACTGCCACCACCTGCTGCTGTCACTGCTGCTGCGCGTGGGTCAAGAACACCCACGGCTTCGCGTATTTGCTTAGTGCAGGGCTAGCACTAATGAACATGCAAGACAAGAGGAAAGCTACCTTCTATTGCTGCTCCTGACAGCCGAGATATGGGCACAAGCAGCAAAAGAAAAAGGCCTGCAATGGGCAATAGAAGCAAAAGAAACCTCATTTAGTTTCCTTGTTAATTTAGTTAGTTAATTGAACTGTTGCGTATGGAAATGATACTGTGGTGGGAGTATGGAATGAACTAATTCGTTAATTATGTATTGCAACTTTTTGTATATGTATGCAGTTCTTATGGGTGCAGAATGC

Explanation	CPC Score
noncoding (weak)	-0.863733

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0083200.1	11	531119	C	A
Osa11LNT0083200.1	11	531721	T	C
Osa11LNT0083200.1	11	531723	G	A
Osa11LNT0083200.1	11	531831	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0083200.1	osa-miR5832	Cleavage	4.5	18.062	1	21
Osa11LNT0083200.1	osa-miR2878-3p	Cleavage	5.0	15.594	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0083200.1	11	nan	Morphological trait	Panicle/flower	RM286	RM332
Osa11LNT0083200.1	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus