>Osa11LNT0083800.1

AACAAAATGAGATTTTTTTTTGAGTGAAGAATATAGGTATACGATAATATATAATACATTCCACAACAGAAAATGAATCACACGATCTGCCGCATGCGGCTCGCATGCTTAACAAACTGTGGTCGTCATCGTAAGCTCACCACATGTGGCTCGCATGCTTAACTAACGGCATAATTAAATCACTTGATGATGACGCATATCGGTGTTCACTATATATACTATCTACTGGTAAGTATATTAAAGATATACTTACCAGTAGATAGTATATATAGCGAACACCGATATACGTCGTCATCAAGTGATCTAATTATGCCGTTAGTTATTTAAGCATGCGAGCCACATGTGGTGGGCTTATGATGGCAACCATAGTGAATATTGAACAAGTTGGCAACTCACGAGCCATCCTCTGTGTCCTTGATGTCCATCTTTGTTGAGCACCTTGACTGCAACAGGTAGTGACTTCAGACCAACCCTGACATTCTCATCTATGTAGCCCTTGTAAACAGTCACAAACCCTCCTTCACCAAGAAGGTAGTCAGCACGGAAGCTTTTTGTGATGGTCTCAAGTTCAAACAATAAGTCAATCACATCGTTGTATATGGAGATGTTCTTGGCATCTTCAACTTCAATTTTCCTAGGTGTTGAAGGATCACTCATATCTGATGAGATGCGGGTGTGCTTCCTCTCTGCAACAGCATTCTTGACAGGATGTTGTAGCAAGTGGAGCTGCTGAACTTGGGCGTGCGCCGCGACGACGGCATTCTCCTCTCGCGTCCCGCAGTTGCCCATCTATCTCCTCCTCCTCCTGGTGTTTTTTTATGGTGGTGGT

Explanation	CPC Score
noncoding	-1.15667

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0083800.1	11	959668	G	T
Osa11LNT0083800.1	11	960488	G	T
Osa11LNT0083800.1	11	961354	T	C
Osa11LNT0083800.1	11	962201	C	T
Osa11LNT0083800.1	11	962215	A	G
Osa11LNT0083800.1	11	962217	A	T
Osa11LNT0083800.1	11	962242	A	G
Osa11LNT0083800.1	11	962459	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0083800.1	osa-miR810a	Cleavage	0.0	20.03	1	21
Osa11LNT0083800.1	osa-miR810b.2	Cleavage	0.0	22.249	1	21
Osa11LNT0083800.1	osa-miR2867-3p	Translation	4.5	14.642	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0083800.1	11	nan	Morphological trait	Panicle/flower	RM286	RM332
Osa11LNT0083800.1	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa11LNT0083800.1	osa-MIR810a	88.39	267	1	237	4.84e-80	294
Osa11LNT0083800.1	osa-MIR810b	100.0	223	1	223	1.2e-115	412

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus