© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0084100.1
GCATGTCTCCTCCAAGAAAAAAAAATGAAATGGTGTACCAAACAGAACAGACACTCGAGTCCATCAAGTCACGCGTGTTCATAACACGTAGTACTGTTCTATTTACCATAGCTCTGCAGGTCCATTCACATGTGAGCAAGATAGAGTGATAAACACACAAAAGCTACTAGACATGTGTCACAGTCCAAAATCAAAGCCAAGCCAAACCAAGCCAACATATATTGGCAGGCAAATCAAGTAATCAGCGGCCAGAAACAGTGTAAGTTGCTTACAGGAGAGCAGGCACAGGCTGCCCCAGAGCCTCGTGCCCCGGCTGCTCATCAGTGTGCTACTGTTTGGAGATCACAGGTAGCACATCCCTTTCCATGGCGATTAACGTATACCACACTGAACCAGCAGATTGCGACCATTTGGCAGCCAGCCACTGCTTGCAACCATTTTGTCAAGGTCCAGTGATTCACACATCAATGTGTATCATAATAAAGATCCCAACGTGTCACCAACCCAGCCTTGAAAAAACATCCAGATTCCAGACACAGTTGCTGTCACCGACCCACACAAATATCAGTTGCTCAGTTCCAGATCATAACAGAAGTGTACCAAAATATATGAGAAAAGGACTCTCATAAGATGATGCCACATATACCTGGCAACTCCGAAATAAAGCATCAGGAATAGTTAATCAAGCTTAACATTCATACTCTACAACAATCCTGAACAAAAAAACAAAAAAAAAAAAACTACCCATCTCAAAATAACACAGCTGGTATTGGCAGCCACAAAGCCCCATATACAGGAAAATAGGGTCTCCAGCATCACCCAAGTCAGCACCATCATCAGGGTTGCATCTGAAGTTTCCTGAGCTATATCAGCAACATGAGAATAGTTACCACAAGACTGTAAAATTGTGGATCATCTAACCGCTGCATTTGTGCCAGAAGGTTGTGAACTAAACTTCTGGGCAATAGCATTAATGCAAGACCTGTTCCTAAGTTACTCTCCATTGACAAAGCTTTTACTGTCGTAGTACTTCTTCTCACTGGCTTCTTTCTTCTCGTTCCGTTTCTGGTAGGCTTCATGGTTAGCAACTATCCTCCTTATGATAGTACTAGTAGTGATGTCTAAAGGGCTCTCCAGTCTACGGTAGATGCCCATAGCCCTTGGAACAGCATATGGATTTAAATCATCCTTCATAAAGTCCATATTCTCAGCAATTGTCCCATGAACAACCAACGAAATATTAAATGTGGTAATCATATCTTTCGAAACATCCCATGGAGCACCAATGATCACTTCATCAACATAACGGCAAGCCAAAACACTCAAACTTCTCTCATGGAGGTTCATGATTGGGCGATGTGGTCCTCTTGTTGAACTTATAGTCTGGTCTGTGTGAATACCCACAAGCAGGAAATCTCCAAGCTCTCGAGCGAGGCGCAATATCTCAACATGTCCAGCATGGAATAGATCAAATGCACCATCTATGTACACTATCCGAGAATCTGGACCTGGACCCCTGCTATTTGAGAACTGAACTATTCTCCGAGATGTAGGAAGAAAATGAGATATCCTAGTTCCACTTCCAGATCCACTATCATCAATTTTCTGGCCATGCCCGTGACTGAACTGCCTTTGTAGTGAAGAGTGGTTGTGACTATCAGAAGCTGATCTCTCTCTAACACAAAGAAGCATTCTTCCAACAATGTCTGTCGTTGACACTCCTTCGGTTCTTTTAATCTGTTTAAATCGACCAACCTTTTTGGCAAGAGCATATGCATCAGTACCATCTGGGAGCAGACAAGGATCATCGCCATGGATGATATAATCTATATTATACTCATTGAATAATTTATTCATGAAATCCTCAGTTATGGCGTAAGGTGCATCTGGAATAACATCGTGTACCCATTTTACAGCACGGACCATTATCAACCTCTCGTGGAGGGGCGTGACCGGCGGGCCCTTGTTGGCGGTGATCTCGTGGTCGCTGACAACGCCGACGATGAGCTCGTCCCCGAGGGCGCGCGCCTGGCGCAGCGCGTTGCAGTGGCCGTAGTGCATCATGTCGAAGCAGCCATCCATGTAGACGCGCACGGGGCGCCGTCGTCCGCGGCGGAACCGGCGGCGGAGCGCGTCGACGGGCGGCAGGGCGGGAATGGCGACGGGGCCGGCGAGGTGGAGCGCGACCACGGATGCCCCCAGCACGATCCCGCCGATGACGCACGCCGCCACCAGCTTGGCGCTGCTGCTCCCCGCCCCCGCCTCCATAATGAATTGGGAGATTGGACAGTGCGAGAGAGACACAACAGGAAGGAAGAGGGAGATTGGTCGTGCGCGAGAGGGCGTGGGAGGAGGGATCTAGGGTTAGGGATTGGGGCGCGTGGGTGGAGGAGGTATCGCCATTCGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0084100.1 | 11 | 1072563 | A | T |
| Osa11LNT0084100.1 | 11 | 1073504 | T | C |
| Osa11LNT0084100.1 | 11 | 1073723 | T | C |
| Osa11LNT0084100.1 | 11 | 1074923 | C | A |
| Osa11LNT0084100.1 | 11 | 1075728 | A | T |
| Osa11LNT0084100.1 | 11 | 1074578 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0084100.1 | osa-miR5820 | Cleavage | 4.5 | 13.226 | 1 | 21 |
| Osa11LNT0084100.1 | osa-miR6246 | Cleavage | 3.5 | 18.316 | 1 | 23 |
| Osa11LNT0084100.1 | osa-miR172a | Cleavage | 4.5 | 16.248 | 1 | 21 |
| Osa11LNT0084100.1 | osa-miR172b | Cleavage | 3.5 | 16.248 | 1 | 21 |
| Osa11LNT0084100.1 | osa-miR172b | Translation | 5.0 | 15.69 | 1 | 21 |
| Osa11LNT0084100.1 | osa-miR172b | Cleavage | 5.0 | 11.766 | 1 | 21 |
| Osa11LNT0084100.1 | osa-miR172c | Cleavage | 4.5 | 16.248 | 1 | 21 |
| Osa11LNT0084100.1 | osa-miR172d-3p | Cleavage | 4.5 | 16.248 | 1 | 21 |
| Osa11LNT0084100.1 | osa-miR1883a | Cleavage | 5.0 | 11.411 | 1 | 24 |
| Osa11LNT0084100.1 | osa-miR1883b | Cleavage | 5.0 | 11.411 | 1 | 24 |
| Osa11LNT0084100.1 | osa-miR2097-5p | Cleavage | 4.0 | 13.137 | 1 | 22 |
| Osa11LNT0084100.1 | osa-miR5150-5p | Translation | 4.0 | 15.605 | 1 | 24 |
| Osa11LNT0084100.1 | osa-miR2275d | Translation | 4.0 | 18.339 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0084100.1 | 11 | nan | Morphological trait | Panicle/flower | RM286 | RM332 |
| Osa11LNT0084100.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)