© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0085300.1
TACACACATTTGTGTTTAATTTCTTGGATTGAATAATCAATGCCCTTCATACAAAAATCGTTCTTGGATTTGAGTATATGTTTCCTAGCATAAGTATCACTCTCGGGTCTAATTAGGTCTTGGTTCCTTTTGCACTCAAAGTTGAGACTCGAAAGAATCATGAAACCAATCTCTGGTAGCTCACCGCTACTCCATTCTGGAGAATAACAATAAATCGTAACAGCGGCAGGACATGTTGCACAAGTGGGTTGCGGATGCAAAGCTTCAGAATTTCCTTCGGATGCAATCAGTAATGAAACGCTCATCCTATTACACGGTGATTCCAGTTTGCGAGAATAACCCACCTTCCCTGGTGCTCGCGCCCTTTATACATGTGCGGCCTTGTTTTTGACATTTACTAAGACGATTTAACCTTGAGAGCTTCACTTAATCCATCTCCATGGCTAATCCAGTGGCATCTTCGAAGTCTTTGAGAATATCCATGCATTGCTTCAAAAATGCCTTTGCTTGCTCGCTTTTTTCCGACTCACAAAGTTCAGCAAGTTCGCCTGAGAACTTGGGCCCTTTTCTGTCAACCAATGGAAAGTCTCTATACAATTTGCTCAACTCAAGGAGACACTCGGAAGCAGCGGTGTGAACCTGAGCAATCTTAACTAAGCGTATGACATCCACAACTTTTGGTGCTGTTGAATGAAATAACTCCTCAACCAAGTAAGTTGTTTCCTCAGGCCAAGTGTTATTACCATCTGGATTCTGGAATTTATAGCACAACTCTTTGATACACAAGAACGATGACAACTTAATCTGCCAACTCTCCTCGGGGGATAGAGAATTTAAAATAATTTCCAGGATATTCTTCCTTTGGTTGATAATATCTTGCAGGAAAGCAACAGTGATTAAAGATGCTACACAGTTGAGCACCTTATCAAGAGAAACAGAAACACCTTCAGTTTCATCTTGCTCAGCACTAGAGGATGCAGTGAGTGAAGATGAGTTCCTTGTTTTACAAATGACAGATCGATTAGAAACCTCATACAGCATAGGAAAAACAATATTGAAGAATCCTGGATCTTTGAATGCTGTAATCACTTGCTGCAAACACGAGAAAGCTGCTTCACGGTACAATTTTGACTTCCTACTGCATGCAGCACAAACAGCATTTAGAATAACACTAGGCATGCCAGAGTCTTCTGCACTCATAGCAGTATGGCAGCTCGAACAAAGTGCAGCGAGTGCATCCAGAATAGCATCTTTTCCCTCCCAAAATCGACCAGGTAGTTCTTTCAAAAGTGATTCAAGAATATTATTGTGGTGCACAGACAGGGATTCTCCTAGAGCATCACATAGTTTTTTTATAGCCTTGGCTGACTTTCTCTTCCCAGCCCATGACGACGAGGACATGGAATCACACAAAAGAGAGATAATTTCTGGTAAGTATAACTGTAGGGTTACTCTTTCGCTACTAGGAATATCCTCCCAAAGTTCTCCATACAATGCACCGATGTCTTTGTCATCATCAAATCTTGAAGCAAAAATTACTGGGAGAACAACTGCATTGTATCCACTAAGAATATCTGCTGCATTGCTTAAATAAGATTTAATAAGAATTGCAGCAGACAACTGAGCATTTTTTTCACCTAAATGCAGAGAAGTGGTATCTTCAATAAGTTTCTGAGCCTGAGAAGGGCTGGCATATTTTAAGACTGCAGCACAAGATGATGCAAAGGCCCTTTTAGCTGCAGAACTCTTTTCCTCCAGAACAGCACTATACAGTAACCTCAGCAATGCTGCCGCATATGGCTTGATTTCAACCATGACCTTCTGTACTAACAAGGTGATGAAGCTAGCAACACCAACCCTTGTATTAAGACCAACAGCAGATTTAACCATTTGAGCCAGACGAGGAACTAAAAGATCCAGTGATTCTTTGTCAACAACTTTTAAACAGATATCAAGGGTTTCCCACATCGGAGAATCTTTAGCCACAGCTATACGCAAGCTCTCAAGCTTTTCAGTTTGGATGCCAGCATTTCCTGCATGCATCTCAACATAGTTCAATCTTTGATCCTCCAGACTTGATAAGCATTCGAGCATACAGCTGACAAGTTCTGACAGATGTGGCTTAAGTGCAGGGCCAGCCCCCTTAGCAAGCTTCATAACCAAACTTATAGATGCCTTTTGAACACTTGAAACTTTACTGAGTATGCCTTCAGAAAGCAAGTATGGCAGTACAATGTTCATTGTTTCATTTGCATCAGATGAAGTAGTAAGTGACACATCACAGAGCCTAACTGTCAACAAGCTTACAGCTCGGCACAAACTGTCACCAGCATTTCGCACAGTTTCCTTAATATCATCCATTGCTCGGAAGGTGGTAATCCATATTTTTCTCAAATGCTTAGAAACCTGACCATATCTTCGACCTTGAATAATGTCTGCAAGTGCAAGACATGAAGCTTCACGTGAACGCCAAAGCCTCGATCCAGATTGAACCAATAAATCTTCTACTATTAGATCATAATGTTCATCTATTGTTTTTTTTGGATCTGCAACAATTAATTTCCATATGTGTGCCATAGAATCCTGGATGTTCTTATCAGGATCATATTGGTAACGGACAAGCCTGGGAATTAAGGTATGCAGATGAGGCTGAAGTGCCTCACCAGCTTGCTTGGCTATCTTGGAAAACCCAAAAGCAGCACCCCTCTTGGAATTGATAGCAGCCTGATAGTTAGCTAGATCCATAAACTTGTATATTAAGTCAGGTTGGCCCATCTCGTTGGCAAGGCTACAAAGTTCCTTGTATGTGCTAAGCTTTCCTCCAGTAGGATTATTGCCAATAGTTCCTTCTTGAAAAACCTCTGAATCCTCCATCAGCTTGATGGCCCTTTTCTTTTTTGCTGCGCCAGACAGTGTATTCACAAGAGCATGAACCAGCTGCTCCTTCATAGATGCATCACCAAGCTCATATACAATACTCATGCCTTGGGATGCCAGATCTTGTGTAAGATCATTCTGATCACCAAGAAGGTGGGTAAGGGCTTCCTGAATTTGTGGAAGTAGTTCCAGGATCTTTGGATGCTGACCACAGTACATTGTAAGTGAGACCAACCAGACAGTACCTGCGCACCTTTCCTCTTTTCTACTGCTATAAATTAATGTATCAAATAACCGTTTTATAATTTCTTCTCGAGCCATTGCGTGTGCTTCTTCACAATCACTTCCTTTATTAGAGTTACTCGAGACAAGTACGGGTGCATCACCAGTAAGATAGTTTGTGGCCTGGGAAAGGGAGACAAAGTTCGTTTCTAGTATTACATCTGTGGTCACAGGAACTTCCCCCCATATAAAAGATAGGGCCTCCCCGGCTGCAAAAAGAACTTCTTCCACCTTAGAGCGTGAAAGACTAAAAATTAAGTCCAATGCATTATTCAGGTGTGCAAATGACAACTCGTTCCAAGATAGGTGTCCCAGCGATATCAAAATCTTTTGTATAGCTTTAGTATCATTTTCTGAAAGCAGCTTAGCCAGCTTCTCATTCAGGATTGTTAAAAGTGCAGCTTGAGAGGAATTTCGATTAATAGAAGGCAATAAACAATGGAGACCAATATGACCAAGAGCTTCCATCGCAGTGGATGCCAATGCTGAACCCTCAGACTCGACAACTTTTACAAGAACATCAATTGATTTCTGCACTATTTCTTCAGTTATATAAGATTCCTTTAAACAACCAGCAGTTATATACCCAATTGCACATAACAATCCATGGTAATTTTCGAATCTTGATGGGCGATTTTGATCAAATGTTGAAGTGAGCTCAGAGAGAAGATCCAGTGCAGCAGTGCTTGAAAGGGCTGAAGAAGTAATACCAAGCAGACGTGAAGTTGCTTCACGAGCATCAGCATCAACATGGCCCAGTAAAGTTCTTAGCCAAAGTAAACGGTTCACATAGCGCGATGACACCAACTTTGGTTGACGAGAGGAAATATCGACCAATGACTTCAAGGCCAATGCATGAAGTTCACTAGATCCTTCATATGACATGGCATGTTCTAAAATGATACACAATTTTGATACTGGACAATTAGATAGATCTTCTTGAAGAAAATCCGAGCCATCACTTTTCTGAAAGCACTTCATTAGAAACTTTATCATTGCAAGAAATGTTTTTGTTGGGAAAAGCAATTTTCCGTTCCTCTGCTCATCACAGTGTAGCAACTGAGGCTGTTGGCTGTATACATAATTTACCATGTCTGCAATATCAGGATAGTTGGAATCAGTTGCTATTGCAAATGACTCCCTTTCATCATTTAACAGATTCAGACCAGTTAAAGCCATTTCCCTTATGTCCAGTTTTACATCTGAAGCACCAAGCATGCAAATGTATCGGCTTGGGCAGTGCTTCATATCGTATAGTGTTGTTGCCCATCTTACAGCAGAAAATCGGACCTCACTTTGCTCCATTTGAGAATTTTCCAAAAGAAGTGCCTCAATATCCTTCAATATTACAACCGAAGCACCCTTGTATGCTGTAGCAAGGGCAGTAGCTGCCTCCTGAATTGTCAAACGAAGAGATTGCTCCTCTAATCTTAAAGCAGTAAAGAGTCGTATAGCCATGTCAGTTTTGTTGCTGAATAAATTAGGCATGCGAGTGGCAAGCAAACCAATTGCCTGGTAGGCAAATATTTTAATATCCCTACTGGAAGAATCTGCTTCAGTAGTGGAAGAACCATCAAGTGAACGTAATATTCCACTGAGAATGACTGGACCAATTAACTTTAGCTGGTCATTTGCTGCATGTTTGAAAACCCAGACAGTGAACTCCATCCCTAACTGCTTCAGCCTTGAAGTAGTCCCGTTTCCATAGATGCAGCCAAAGATGCACTGAAGTGTGTACGGGAATGCGTTTGCTGCAGCAATCGATCGGCAGAAAACACCCATAAGGCGGACTCGCAGTGAACTATGTGCTGGGGCGACTTTCAGCTCTGCAGCTATATTTTCTGGACTTGCAGTACCATTGAATAGTGTGAACAGTTTCTTCATAAGGTTGGAATCTTCTAGGTTCACAGCTGAAGCTTTGCGCTTTAATAACTCCTCTCCTCTCTTAGTAACTGACTCTTGACTATCTGAAGCAGCAGCTAAATAAAGAGGGTAAACAATCTCTGGTGCCAACTGCATAGCTTCAATGACGTTCAAGATTCCTAGCTTTCTTGATGTAAGTGTGTCACCTTTTAGTGGCTGCTTTCCAGTAACACGATCTGATTGAGCAACCGAAAGTCCTGCCGGGCATCCAACACCTTGAGGTGGTGTTTGATACAGTACTGTGTGAAAACAGAAGTCAGCGAAGACTAGACCATCATTAGATCCACTTATGGATTGATATTTTGAAGCAACATTGTCACCCACCTTATGTGTGTTACATTCACCAATAGCCTTCACCACAAGTCTCAAGATGATTCCCTGATGCTGCTCTGTAACATTTGATATGTTGATTAAAAGATCAGGTGCTATGCTTCCCTTGTCCTCACTTAGCAGACGTTCAAATGCCATCTCAATATAAACAATGCAAAAATTCCGGACTATTGTGGAGGAAGTAGATTCAGTATAAATCCTCCATAAATCCAGCATGGGCAGTGAAATCTCAGGCCTGTGCTTCACCCGTTTGTTAATGTGGCTGAGAATTTCCATAACGAGCTTGCGGACGGATGCGGTGGCGGAGGCGAGCGAGGTGATGGCGTAGGGGAGGACGCGGGCGAGCAGCGGCGCGAGCCGCGCGTCTTCGGCGAGGGCCAGCCGCGTCAGCATCCGGTCCAGCGCCTCCTCCCTCTCCGCGTCGGTCTGCGCCGCCGCCGCCGCCGACGATGTCTCCGCCATCTCTCTCCCGGCGATGTTGGACTCAGCTGCTCAGTCGCCCGTGTTTCCTTCCACCGCAAGAAGGTGAGAAGAAGAAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0085300.1 | 11 | 1720769 | T | A |
| Osa11LNT0085300.1 | 11 | 1719258 | G | A |
| Osa11LNT0085300.1 | 11 | 1720031 | A | C |
| Osa11LNT0085300.1 | 11 | 1720586 | C | T |
| Osa11LNT0085300.1 | 11 | 1721284 | C | T |
| Osa11LNT0085300.1 | 11 | 1723331 | G | T |
| Osa11LNT0085300.1 | 11 | 1723651 | T | A |
| Osa11LNT0085300.1 | 11 | 1724684 | A | C |
| Osa11LNT0085300.1 | 11 | 1733401 | T | C |
| Osa11LNT0085300.1 | 11 | 1733810 | A | G |
| Osa11LNT0085300.1 | 11 | 1734957 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0085300.1 | osa-miR5540 | Translation | 5.0 | 15.158 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR5542 | Translation | 4.5 | 12.603 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR5797 | Translation | 4.0 | 14.678 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR812t | Cleavage | 5.0 | 19.989 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR812t | Translation | 4.0 | 18.74 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR812u | Cleavage | 5.0 | 19.989 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR812u | Translation | 4.0 | 18.74 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR5815 | Translation | 4.0 | 15.456 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR5179 | Cleavage | 5.0 | 16.095 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR6253 | Cleavage | 5.0 | 12.21 | 1 | 22 |
| Osa11LNT0085300.1 | osa-miR6253 | Translation | 4.5 | 14.846 | 1 | 22 |
| Osa11LNT0085300.1 | osa-miR6255 | Cleavage | 5.0 | 14.073 | 1 | 22 |
| Osa11LNT0085300.1 | osa-miR6255 | Cleavage | 3.0 | 17.313 | 1 | 22 |
| Osa11LNT0085300.1 | osa-miR1437b-5p | Translation | 5.0 | 15.409 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR166k-5p | Cleavage | 3.5 | 13.51 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR435 | Cleavage | 4.0 | 11.152 | 1 | 20 |
| Osa11LNT0085300.1 | osa-miR1428a-5p | Cleavage | 4.5 | 23.073 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR444b.2 | Translation | 4.5 | 14.555 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR444c.2 | Translation | 4.5 | 14.555 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR1850.1 | Cleavage | 4.5 | 13.903 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR1852 | Translation | 5.0 | 16.095 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR1853-5p | Translation | 4.5 | 22.005 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882a | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882b | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882c | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882d | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882e-5p | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882f | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882g | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR1882h | Cleavage | 5.0 | 20.334 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR2092-5p | Translation | 4.5 | 18.545 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR2093-3p | Translation | 5.0 | 11.862 | 1 | 20 |
| Osa11LNT0085300.1 | osa-miR2922 | Cleavage | 5.0 | 19.079 | 1 | 20 |
| Osa11LNT0085300.1 | osa-miR812n-3p | Cleavage | 5.0 | 19.989 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR812n-3p | Translation | 4.0 | 18.74 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR5144-5p | Cleavage | 5.0 | 17.265 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR5144-5p | Translation | 5.0 | 7.368 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR5150-3p | Translation | 4.5 | 24.04 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR5157a-3p | Cleavage | 3.5 | 12.746 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR5157b-3p | Cleavage | 3.5 | 12.746 | 1 | 24 |
| Osa11LNT0085300.1 | osa-miR5499 | Cleavage | 4.5 | 12.484 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR5500 | Translation | 4.5 | 9.644 | 1 | 22 |
| Osa11LNT0085300.1 | osa-miR444d.3 | Cleavage | 3.5 | 13.631 | 1 | 21 |
| Osa11LNT0085300.1 | osa-miR5500 | Translation | 4.5 | 10.236 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0085300.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0085300.1 | 11 | nan | Morphological trait | Panicle/flower | RM286 | RM332 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)