>Osa11LNT0086400.1

GGGAGAAGAAATACTATTCGGCTATCAAATGGAATGAATGAACTGAAAGAATACAGGAGTAGGAGAGGACATAGACAGATGTTTGCACAAACATAAAATTTGTTCCATTCAGTAGGAAGCGTTGATGGTATTGTGAGCTTAAGAAGAAATGCTACAGGCCACTCCCAAACTTTTGTCACCTTACTGAACATCGTGCACAAAGTAGGGTGTTGTTGCTTGCGATCCTCCACTGTTACCGGCAAGTCCATCACCACGCGACCAATGCCATTCACCACCTCCAGCTCGGTGGTGCTCACCGCCTTCCCCTCAGCATCCAAATCCATGTATACCACTAAGCCCACGAAGAAGACGTAGAAGAGCACGAGCCCGATGGCCTGCCAGAGGTATATCTCGGCGCTAAGGTAGATGTAGAAGAGGCCGGAGGCGGCGAGGAGGTAGAAGAAGACGTCGCGGGCGAACGACGCGGGCGGGACAGCGAACGGCGCGGCGATGAGCGCGACGGCCCCGACGACGAACGCGGAGACGAAGGCTCCGGCGGAGAGGATCGCGGCGAGCCCCGCACGCCGCATCCCGCCGGCCCCGCCGAGCGCGGCGGCGGAGGCGAACGCATCGGGGGCGCCGTTGCCGAGCGCGAGGAGCGTGACGGCGGCCATGGACGGGGAGAGGCGGAGGCGGGCCGCGAGGCGGGAGACCGCGGGGGAGAAGTGGGTCCCCGCGGCGGCGGCGAGGACGCGGAAGTGGAGGAGGAGGAGGAGCGCGAGCGCCGGGAGGGAGGCGCGGCGGTCCCCGCCCAGGAGGCAGGCGTGGATGGCGCCGTAGTCGAGGATGCCCGGCGGGTCGGCGCGGACGGAGGCGGCGCACGCGGCGGCGGCGGCGGGCGCCATGGCCCGATGCGCCGCGGCGGCGCGGTGGTGGTGGAATGGCGAGCTGCCGAGTGGGGAGTGGAGGGAATCGCGGGGGAAT

Explanation	CPC Score
noncoding (weak)	-0.00621202

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0086400.1	11	2218864	A	G
Osa11LNT0086400.1	11	2219073	A	G
Osa11LNT0086400.1	11	2219645	C	T
Osa11LNT0086400.1	11	2219977	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0086400.1	osa-miR5543	Cleavage	5.0	12.0	1	21
Osa11LNT0086400.1	osa-miR1881	Translation	5.0	12.135	1	24
Osa11LNT0086400.1	osa-miR2096-3p	Cleavage	4.5	19.565	1	21
Osa11LNT0086400.1	osa-miR5078	Translation	4.5	22.491	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0086400.1	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286
Osa11LNT0086400.1	11	nan	Morphological trait	Panicle/flower	RM286	RM332

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus