© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0086500.1
GCTATATATATCAAGGATATCGCATCCACTCGGAGAAAGAGGCACTTCTATTCTTTTTCTGAGGGAAAAAAAGGGGCAAAAGAATCCAAGACAACACATTGTCAGGAACATGGCTTCCAAAGTCCAGAGCTCCTATATAACACGTAACTAAGAGCAATCTAATCCTATAATCCTCCCCTTAAAAAGAAAACCGCCTAGATGAATGGAAAACGGCTTTTTCGATCAACCATTCATTAATATATGTACAGTTCGCCGAAAACCTTGGTTGTCAAACCATATTGCTAAGGTGTGTCCAGTAATCAACGCCACAACTCCCAAACGGTCAGTGGCACTGACAATGCCAAATAGCTAGAAGGGAAATTTTCCCTCGCTCCTCCTTGGTGTGCTTCATGAGATTTCTTCTACAGATCCACCTTCGACTGTAATTAGACAGCTGCTCTATGCAGCTCTCAGGTAACAAGTGCAATGAAAGTTTGAAGCTCATCATCGCCACTCCCGGCAGGCACCACAACTCCAATCGGCACTATCTGATGGCTGTTCACCATCCTCCCAAGGCGAGCAATGACGGTGCATCTGCAGTCCACATACTGCGCATTTGAGATCAGGTGGCGGCTGAGGATTCTTGCACCTGTCACATGCTACCTCGTCAGAGGCGGAGTCAATAGCTGGGAAAGGCATGTTTGAGGCCCCATCTTCCATCATGAAAGCCATTTCATCAAAACCAATTCCTTGTTGGTCACCATCATCTTGCACACTATTAGACATCCCAAATGTATTATCGAACTGTGTATCATCAGCTTCAAGTAGTTCGGTGAATGAGAAATAAGTCTGTGGTTCATATTCATCACCAGCAACGCTGCCACAGCTGATGTCATTCCACGGGCAATTAGCTGCGAAATCAGAAGGGGCAGCACTGGTATTTCCTTGAGAAAAATCCCATCCCAACAGCTCTGAAGCATCCACACCATCAGCCTCTGACAAAGAGAATTCATTCGAGTGACTGAAATTGATGTTTGCATTCCCTTGAGGTTGATTCTGGATATAATAGTCATCCACATGTATACTGGATTGGTCAACATATTCACAATTTTTGTTTTGTCCCCTTCTTACTGATAGTTTCTGATTTCCTGGGTTAAAGCTCATCATGTTCATCGATAAATCAGCATCCATTGTTTGTGCTCCAAACGGTTCAACTCTGCCATATGAAGCAAGCAGTGGATCTTGATCTGCTACAGCAAAATTCTCCTCACTAGAAAGCATAGTTGACTGTGATGACGTAGCGACTGTTTGCTCACTGTATTCTGGTTCAGGCTTCTTATAATCATCTGAATGAGGACATTTTGGTATGGCTCGCCTTCGGCATCTGCAACATCGGTATGAAACCAATTCAAATATCTTTTCTTCCTCAAGTTGCAAGGCATCGCCATGAAACCACTTTTTGCACCTCTCGCAGCGGACATACAGGAAATCTGGGCAATAAGGCTTATTACAAAGACAGCAAGTAGGTTTTATTGATGAACCTACACCATCCTTGCCTTTTAGGATAACATCATTCGCCCTGAACACTTCTCCAGAATTTTCATTATTATTTTTGTCATTAGTGCTTTTCTTCCACACGAGACCAAAGTATTTGATCTCTTCAGTCTTCTTGGATTTTCTCGGTTTTTCTGGCTTGGGTTTTTTAGATTTTGTCTTAGGCTGGACTTGCGCCCCTGCATTATTCTGAGTTGCCAAATTCGAAATTGGAAAGGCTTCCACTTTTGCAGTTGGCTGTGCTTCTACATTTGCAGTTGGCTGGGTTTCCATCTTCACAACTGGCCAGGTTTCCTTCTTGACCACTGGCTGGGCTTCTACCTTCACGATTGGCGGAGCTTCAACCTTTGTGGCTGGTTCAGCGGAATGGGAAGAACCAACCTTAAAGATTATTTTGGGAGCTGCCACTGCGTGATGGACATTACTCTTCTGTTGAGGTAGGATGAAACTTGCGTTTGTATTGTAATTTGTAAGCATAAGACTACGCTTCTGAAGGCACAACTTGCATGTTAAACTGGAAGCAGCATTGCCCTCTTTGCTACCAACAGACCTTAATGTGCACTCTTTATGACAATTACCTTGACAAGAGCTGCATTTTATGATATCCCTGAAGGAAACATCCTTCTTGCATGAGGTGCAAGGATATACATCACCCTTGTGAAGCAGATAGAAGAAAACATCTCCAATTGATGATTTTACTCGCCTTTGGTAGAAATTGGCAAAACAGTTAGAATCTAACATTCCTGGAGTAGGCAAGGAGCTAACCCCAGCTTTCTGCTCAAATTCTCGTAGCAAGTATAGTGGGATATGGTTTTCAGAAAACCAAAATTTCCCATCCCCATCCTGATTATCTTCTGCTTCCAAAATATTCTTTGTTACACGGACAGGAAGATGCTTCTGGTTGGGAAACTTAAGTGCATATCTTATCTTATTGTCAACTATTTTTTTATCACAAACAACTGCGTTTCTGAGAACAGAATAGTCAGAATCTACACTTTTCCCTTCTGAAGGAATTTGATCTGGAGGGATGAACTCCTTCCATCTTATGTGGGAATCAAGATATCTAACCTGGAGAGCAAGTTGAGATGAACTCTGGCTTAATCCAACACATGCCCTCCAAGCAAGTTGCCGAGTCCGCCTTGGAAAATTGGAGCCTTCATGATAAGACACACTGAACATCCTTTTTTTTCCACCTTGACGAGCAGCTTTTCTAATGGTCAAAATTGGTAGAGCCCCCCTCTGTAAGATACGCTTTGAAACATTTCCTCCACTCCACCAATTCACTTCTTTCCAGCTGTTGTCATCATCAGTAACAGGAGCAGATTCAGATGCCATTGAACGTTTTCTGCCCCGCCTTCCACCAGTTCCACGTTTTTGGTATGCTGCAGGACGGGATGCACCAGCAGATGCACTAGGAGATTCCACAGGCCAGTCATCTATTAGCTTCAGCCAGCTAGTAGAAAATGCTACACCACGAATATTACTTTCCAATTCAAGCAAGAGGGGTATTATATTTCCACAGTTGGAAGCATCTTTTAGTTGATTATACCACTGTTGTCTCCGCTGCACATCTTGTAGTGAACCAACTAAAAGGCCACGCAAACTTTCCTCCATGTGGCTTAAATAAGTAACAATGCTGGGGAAATGGCTATCAGAATTCTTGATTAAACGCATGCCACTAAGAATTCGAGCAGATCCTTTAGAAGCATTTGCAGTGGCCATGTTAAGAAAACAAGCTTTTTTAGTTCCACCTGCTGAACTTTGACAGGCAAGGCACCAACCACATCTATCTCTTGGGACTTCCATAACCTTCTTTTCAGTACTTGGCCAAACAAATTGTAAGGCTGCTGAGGAAAATGCTTTCACTTGTAGAGCACAGTCAGCAGCCAGTTTCTTCCTTTGGTTTGTTGTCAGATGGGAAGTTGGAGCCTTACCTTCATCAGATTTAAGAACAGCTAGATTGGCAGCAGCAGATGCTGCAACATTCCCGTGATTGTATAGATTCATGTAAGCCTGTGGTCTAAAAGATGAGAATTTAGCTGGCTTGCCACCACTCATATTTTCAGTAATTAGCTGAACAGGGGGCTTGCTTTTATAAGGTGGGCTGATCAAGTCTGCCCTAGCAGAAATAGAGCTCCTGATATTTTCTCTAGACATACCATTACCAATTACTGAACCACACGACAAGTCTGGACGAATCAATCCATGTGCTGGCTGTGCTTGTGTTCTGTTAGGCATAACTGTCACCATAGACATGCTCTGGTGAGAAATTGAGGATGTCCCACTGGGCCCAAAAGCTCCATTTCTGTATGCATTATCTACATAGGTCTTAGCTAATGGAGTTTGCCTAAAAGCTTCATTATTGTTAGCTGAGCACAACGTAAATTGATTATCCATAACCTGATGTGCATTTGTCTGGGAAAGCACTGCCATCTTACTGTCCTGACCATCTTTCAAAGTTGCCTGAACACTTCCATTATTTGCTTTCACTGGAGTAGCGGTCGATAGAATATTGGACTGTGACATAAGGCTTCTACCAACCTCTTTACTTATTTTTGATCTCTCATTCTGAAATATATCAAGTAGATGACTCCAGTACTCTGTCATTCTCCTACATATATCTGTATATGCATCTGAAGAGGCAAGTATTTGGACGACTTTGACAACATCACAATGATTGTAATATCTTGCACAAAACTCCACATCTGAAGATGTTCCAATCACCAGCAAATAGTTGCAGCATCCGAGGAAGCTCCTGCCACACATATCAATGCCAAATAATTGAGCTCCTCTTGCGCCACGCTCTATTCTTGAAGAGGTTGGTCCAAGCTTGTTAACCACACATTCTGGACAGAACCAATCCCCCTGAGGTAGGAAAGCTTTATTCTGACCAATACATCTTGAGTGGTATGCCCATGGGCAGCCATCACAGCATACCAAAGTCCCATCCATTCCACATATCCGGCAATCATCACTGTTGCCATCCTGGGATGCATGTGTTGAAGCAGATTCTGGATTATTTCCGTTTTGGGCAGTTTCCAGATTCTGTAAAGCGTCGAGCTTTTTGCAAGCTGGAGCCTTTGAGCCTCTAGTCAATACTGATCTTGACCCAACCTCCGCAAAAGTACTAGAATCCATCTCATATTCCATTTCTTCACTGTAACCTTCCCGTTCTTCCAGTTCAGTCTTGAGTTCTTCTGAATCAATGACGTGATCACATAGTAGTTGCAGGATCCTAAGCTTCAGGGTAACAGGAAGCTTATAGTACTCAATGGCTAGGACACTTCTACCAAATCTCCGGCCTCCTAGATCTTTAATAATACCCATGACATAGAGGTACTCTAGCAAGAAAGCTGGCCAAGTCAATGAATCTAGTAATGTCCAGTCTAAATACTTCAAGCAATTTGAAGCCAGTTTTAATCCTTCAGAAGATTTGGTCTCAAGATGCCGCCTAAGTGCCCGCAGTAGTGAGACATGAACAGCATCCAACAATGTATTCTGCGTGGTGCAATTAACGGATGAAACAAAATCATCCAGCCCAAATGGACTGAGGAACAGCTGCACACTAAACGATCGCAGGAAGTTGTATACAGAAAAAAGATAACTTATGGCCTCCTCTGGCACAGCAATGTCCCCTGAAGACGGAGGCAACTCCAGGACCTGAACTGGTGGATAATGCTCTACTGGCAGTTCCTTAGTGCAGTTTGATGAATTGCTTGAAGATTCAACATCCTCAGAAGCATCCGAGCCAGACCCACTCTCTTGCGACTCATCAGGCCTAGTGGACACCTCAGATTCATTGACCCTCTGCCTAGTAATTGGTGGCCCTTTCACCTCAGTGGCGCCACCGGATGAAACTAGCAAGTCCAGCTTCCTCTTCCGGCAGCTCACCTTCATGCCAAATGCACCATTCTCTTCACCAACAAGTTGTGACTGGAGCTGAGCAAGCTCTAAATCCTCACCCTGCCCATCCTCAAACACCACACTGTAGATCCCAGTGCTGCCATCATAGGATGCAACCTTCCCAAGAAGAATTCGACCATGCCCAGCGACACTCCGGCTGATGTAACGGCCCACAAGGCACTCCCCCTCCTCCTTCATCTGACAACCATCGGCAGGAGTCGTGGTGGGCTTCTGATCCACCACCCCGCCCTCACATCCTTCCATCTTTACCTCACTTGCCACAGCAGCCACCGTATGCACTTGCTCTTGAACGCCGTTCTCATACACCTCGGTCTTCACTTGGATCGGGGTGCACGCCGCCGCATCTTGCTCCTTGTCCGGGATACTGCCCCCGTTCACCTCCGCCTTCACCTCCCCTGCAGCAGGCGCCACGGCCTGCTCCGCGTCCGCCGTCCCGACCTCGTCGACGTCCATCTTCGTCTCGCTCACCGGATGCGCCGCAGCACGCTCGTGCTCGACCGCGATGACGCCTTCGCCCGCCGCCTCACTCGCGGGGGGCGCCGAAGCAGGGGGGTCTTCCACCGCCGCCGACGCCGACGCGATGCCCCCTGCGATCTCCGTCTCGCGCGCATCATCTGCCGTCGCCGGGGCCGCGGCGGCCGCGGCGGGAGAGGCGTGGAGCATCCGATCAGAAACCTCCATGGGCTCCTCCATATTCTCGGACACCCCCGAAAACCCTAAGCGAGTGCGGCTACAGAAAGCCCCCGCATCGCGAATCACGAGCCCGGAGTCGAGATTCCGGCGGGGCTCATCCACCGGGACCCGAGGCGCCGCCCGACGCAGATGCGAAGCCGGGCACACTCGCGGGCTACGAATCTGGAGAGAGAGCTAAGGGGAAAAACGCGCAACCCCCCACCCGATTCCGCGGCGAGATCCCCGCGCGACGAGCGGAACCCTACCCGATGATTGGATTCATCCGCCGGCAGCCCCTCGCGTGGTCGCAACCCTACGCGGCGGCGGTGGCGGCGGCGGCGGCGGAAGGCGAGGAGGCGGAGGAGAGGAGATGGGGGAAGAGGAGATGACACAGGAGAAGGGAAGAGAAGGGAAGGGAAGGGGAGCGAGGCGAAAAGGAAAGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0086500.1 | 11 | 2247977 | A | G |
| Osa11LNT0086500.1 | 11 | 2248998 | G | A |
| Osa11LNT0086500.1 | 11 | 2250255 | T | G |
| Osa11LNT0086500.1 | 11 | 2250676 | A | C |
| Osa11LNT0086500.1 | 11 | 2251785 | G | T |
| Osa11LNT0086500.1 | 11 | 2253248 | A | G |
| Osa11LNT0086500.1 | 11 | 2253384 | A | G |
| Osa11LNT0086500.1 | 11 | 2254620 | A | G |
| Osa11LNT0086500.1 | 11 | 2255372 | C | A |
| Osa11LNT0086500.1 | 11 | 2255443 | T | C |
| Osa11LNT0086500.1 | 11 | 2255755 | T | C |
| Osa11LNT0086500.1 | 11 | 2248573 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0086500.1 | osa-miR5534a | Cleavage | 3.5 | 12.866 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR5534b | Cleavage | 3.0 | 12.866 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR5542 | Cleavage | 4.0 | 16.432 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR5824 | Translation | 5.0 | 22.375 | 1 | 24 |
| Osa11LNT0086500.1 | osa-miR6255 | Translation | 5.0 | 13.556 | 1 | 22 |
| Osa11LNT0086500.1 | osa-miR6255 | Translation | 4.5 | 23.156 | 1 | 22 |
| Osa11LNT0086500.1 | osa-miR818f | Translation | 5.0 | 21.335 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR7695-5p | Translation | 4.0 | 21.52 | 1 | 24 |
| Osa11LNT0086500.1 | osa-miR156j-3p | Cleavage | 3.5 | 2.508 | 1 | 22 |
| Osa11LNT0086500.1 | osa-miR395b | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395d | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395e | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395g | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395h | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395i | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395j | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395k | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395l | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395s | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395t | Cleavage | 3.5 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395u | Cleavage | 4.5 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395u | Cleavage | 5.0 | 19.73 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR168a-3p | Cleavage | 5.0 | 21.18 | 1 | 24 |
| Osa11LNT0086500.1 | osa-miR171f-5p | Translation | 5.0 | 14.014 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR171g | Cleavage | 4.0 | 18.206 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR171g | Translation | 4.5 | 11.727 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR166i-3p | Translation | 5.0 | 22.4 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR171h | Translation | 5.0 | 18.441 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR415 | Translation | 2.0 | 16.827 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR396e-5p | Cleavage | 4.0 | 16.197 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395m | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395n | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395o | Cleavage | 4.5 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395p | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395q | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395v | Cleavage | 5.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR395r | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR815a | Cleavage | 3.0 | 15.371 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR815b | Cleavage | 3.0 | 15.371 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR815c | Cleavage | 3.0 | 15.371 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR1878 | Cleavage | 5.0 | 15.312 | 1 | 24 |
| Osa11LNT0086500.1 | osa-miR2055 | Cleavage | 4.5 | 16.266 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR2055 | Cleavage | 4.5 | 19.633 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR2101-5p | Cleavage | 4.5 | 11.727 | 1 | 22 |
| Osa11LNT0086500.1 | osa-miR2867-3p | Translation | 4.5 | 11.339 | 1 | 20 |
| Osa11LNT0086500.1 | osa-miR2868 | Cleavage | 3.0 | 12.637 | 1 | 20 |
| Osa11LNT0086500.1 | osa-miR396g | Cleavage | 4.0 | 16.197 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR396h | Cleavage | 4.0 | 16.197 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR396d | Cleavage | 4.0 | 16.197 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR2923 | Cleavage | 5.0 | 8.111 | 1 | 22 |
| Osa11LNT0086500.1 | osa-miR2923 | Translation | 5.0 | 16.063 | 1 | 22 |
| Osa11LNT0086500.1 | osa-miR395y | Cleavage | 4.0 | 20.292 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR812n-5p | Translation | 4.5 | 16.922 | 1 | 24 |
| Osa11LNT0086500.1 | osa-miR5073 | Cleavage | 5.0 | 11.246 | 1 | 23 |
| Osa11LNT0086500.1 | osa-miR5492 | Cleavage | 4.0 | 24.158 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR5524 | Cleavage | 5.0 | 16.477 | 1 | 21 |
| Osa11LNT0086500.1 | osa-miR5519 | Cleavage | 5.0 | 14.673 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0086500.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0086500.1 | 11 | nan | Morphological trait | Panicle/flower | RM286 | RM332 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)