>Osa11LNT0086700.1

GGAGACAAACAAACCCTAAATGCCAAGGGCGAGCGATGGCGGCCCAAATCGGGAAGCCTTGGCGATTCGACGGCTACGGCCGGCGTCGGCGGCGCTGGATCGGTGGCGGTGGTGATTCGTCGGCGACAGCGGACGCGACTTTTCTGGATGCAACGGCGGCGCTGCATCGGCGGTGGCGGCGGCGAATCGTCGCCGACTGCGGGCAGCGGCCTCGATGCGTAGGCGGCGCTGCATCGTTGGCGGCGGCGATTCGTCGGCGGGAGCCCGGCAATGGTTGAAGCTATGATTCGTCGGTGACGGCGGGCGGCCGGGGCTGCATCGTCGGCGGCGACGGTGAATCGTCGGCCACTGCGGGCAGCGGCCTCGATGCGTGGCACAACATGCAGAGTGAGGGAGAAAACTGATCCATAAGGTTGCTGAATTTAATGGTTTGTTTCAGTTGTCAAGGATTATATATGCAGCAACTATAGAAATGATCTTACCGGACCAAGATA

Explanation	CPC Score
noncoding (weak)	-0.0630728

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0086700.1	11	2367649	G	T
Osa11LNT0086700.1	11	2367614	A	T
Osa11LNT0086700.1	11	2368651	C	T
Osa11LNT0086700.1	11	2368771	T	C
Osa11LNT0086700.1	11	2368976	T	C
Osa11LNT0086700.1	11	2368984	A	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0086700.1	osa-miR5078	Translation	4.0	19.47	1	21
Osa11LNT0086700.1	osa-miR5485	Translation	4.5	15.961	1	21
Osa11LNT0086700.1	osa-miR5521	Cleavage	4.0	13.973	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0086700.1	11	nan	Morphological trait	Panicle/flower	RM286	RM332
Osa11LNT0086700.1	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus