© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0087000.1
GATACTGTACTAAATTCACAAAAATGAACAAGAGGTTATTACATAATAATGTATACAAGATTTGATTTACTGGCTATGGAAAAACAGATCACACATCAGATTGAAGCATTTTTTGTGTGTGCACACTTTAAATTTGGTTCCTATGCCAAAAAATAAATAAATAAAGATCACATATATTGAATTTTTTTTCTAAGTAGTGTACAAATCTCCAGTTGCACAGTACTGATTCTACGCATGATTTACAGAATTGATGAACATCTCATCATTTAACCTTTCGTACATCTGATCACTTCAGCAAGGAAATGTTTGTGGATTTACTCTGTTAAGCATTTGCAGAACACCCATGGACAGAAGTTGCACCATATATTGCTCAAAATTTCAGGTAACAACTAGATGACGAAACACATTTTCCGACAATACCTGGCTGAGGCACTGTCTTCTCTTCAGACCCCAAATAGATGAAAATTCCTCTTGAGTATGGATACAGATTTCTGACTGCCTCTGTTAACTCCTAGCAAGATGCTGCAGCATGTGAGTGCATATTTTCACCTAAATATTTCCATTCGATGCGTATGACCAGTACTCCTTGACAAGATCTCGGAAGAGAGATCCTTCAGTTTCCATGAGCTTCATAGGTTTGTCATACTCCACCATTTTCCCATCGCTCATTGCAAGGACCATAGTGCAGTCCATAACTGTTGGTATACGGTGCGCAACAGTAATAACAGTGCAATCTTTGAATTCAGTTCTGATTGTTTTCTGAAGGATAGCATCAGTTGCATTGTCTATGGAGGCTGTTGCCTCATCAAGAACTAAGATGCGACACCGTCTCAAAAGTGCACGTCCTAAACAGAACAGCTGCCTTTGACCCATGCTCCAGTTCGACCCATCTTCCACAACAAGTGAATCCAATCCATGTTCCTTCTCTTGGACAGTCTCAAGAAGTTGGCATTTGTCAAGAACCTCCCATATTTGTTGATCCGAGAATTGCCCAAGAGGGTCTAGATTGTATCTTACAGTACCCTGGAAAAGTGTTGGATCTTGCGGAATAATGCCCAAACATGAACGCAAGTCATGTAAGCCTATTGTGGTGATGTCCGCAGAATCTATGATTATTTTCCCTCCAGCTGGTTCAACAAGACGAAACAAAGCACCAATCAAAGTTGTCTTGCCACTTCCTGTCCGACCAACTATACCAATCTTGTCTCCACCTTCAAATGTGCAAGTAATTCCATGCAGTACAAGAGGAGCATCTTGCCTGTACTTAATCTTCAAATCTCTAAGCTCCACCTTGCCAACTTGGGGCCAATCTGGTGCTGGCCGATTTTCTTCGATAACCTCTGCTGCTTCACTTTCGATGTCCATGTACTGGTTAACCCTTTCCACAGATATGATTTGATTTGCAAGGTTGCACTGGTTTTGAATAGACAAAACAAAAGATGTGTTCAGGGATAGACCATAGGACAATGCCATTCCTACAAAACCAGGGCTAAAAGTTCCTGGAGGAAGAATCGCCATGACAAAAGCAGAAAAGGAAAGAACTGCAGCACTCATCATTTCCAGGCGTTGAATCAGCCATTCAGTTGCAGCAAAATTGTAGAAGTATGGGCCAGCATTCCTGTCCACAAGCTCCAAATTTTTAGCAAAGAAACGATCTTCTTCCTCAAAGGCCCTTATTGTTATAGCCCCTGAAACTGATTCACCTAGGTGATTGGCTAGAGCAGATTTGGTAGTGCCATTGATCCGCATCAATTCCTTAGCCGAAGCTAAATAGTACCTCTGCAACCTAATCGCTAAAATTATCATTGGCACCGAGACAAACAAAACTTGCCATGTGACAACAGCCAATACCCCCAGATTGCTATATGCATTTAAGCTGGCGTTCATGCTAAACATGAAGAAGAATGGAACATCAAGGTCAGCAATACTCAAATCTGAAGAGACCCGGCTCAATACCCTTCCTAGAGGAGTAGAATCATAGAAGCACATAGGTGCACGGAACAGTGAGTTAAGTAGTTGCGAAAATAAGGATCTTGAAGTCTGCATCCCAAGGACTACGATGCATAAAGATCTAGATATCAAGAAAATCATTGAGCAAACTCCGATAGCAATGTACACGACTATTAACCTCAATGTACTAACACTAGGGTTTTCGACGTTAGCAGCCATCCATGAATTTTGTGATATTTGCCCACATATGAAAATTATCTGGGAAATAATGGCGAGAGATGCGTATAAAAATCCTTTGTTCTGGCGCAGGTACAGTGTATAAGGCTTAAGACCTGTATCACCTATTTCTCTTTCCTCTATCTTTATCAGCTGATCTGCTTGTGATGGCTTCACAGACTCCCCATATCTGCTTCCATGAATATCATCTGTCTCCTTTGTTGATATTTCCTTTGCTCTGTGGAGGGGCATGTTATTAATATCTGACACTCCTATAGTATCTTTGTGGGCATTTACAAGGTCCTGAAATTCTTCGCAGCATGCCAACAGATCTTGATAAGGTGCTGACTGAATAATCTCACCATCTGACATTAACAGAATGGAATCAAACACAGGCAGAAAATCCACTTGGTGGGTCACCAAAAGAACAGTCTTGTCTGACAAAGCCCCCATGACGTATTCATTGAAAAGACTTGATGCTGTATGTGCATCAACAGCACTGAAAGGATCATCAAGAAGATAGATGTCTGCATTTTGGTATAGTGCACGAGCAAGCTGAACACGCTGCTTCTGACCACCACTAAGATTTACTCCTCTCTCCCCAATTTGAGTACAATCTCCATGTGTCAACATTGCAAGGTCCTTTTCCAAAGAGCACCTCACAAGTGTTTCTTTGTATCTTTGCTTATCCATCGAAGATCCAAAGAGAATATTGTCTTGCACAGTTCCTGTTTGGATCCATGCATTCTGAGAAACATATGCTATTCTCCCACAAACTTGAATCGTGCCTTCGGTTTTGGGTACTTCTCCTAGTACTGCAGCTAAAAGTGTTGATTTTCCTGATCCTACCTCACCGCAGATTGCAACCTTCTCCCCAACTTTGACCGCTAAATTTATATTCCTCAGAGTTTGTTTTGATGGATTCTCGTCCCACGAGAAGCTGCAGGAGTTTAGTGCTATGGGATACTCCGCACCCGCTCTATATTTATTCCTACGTTGCCCGTTCAGCTCAGGAGCATCAAGAAATTTTACAACCCGGGTGAAAGCAACTTTAGCTTGAATCACAACTCCAATAACATCTGGTATCTGTCGGATTGGTTCTTGCACGAGACGTAGAGTTGCCACAAAGGTGAATACATTTCTAGCATCCAGAGGAACTTTTAAAAGATAGCATGTCAGAAATGTTGCTGCAGAAACCAAAACAGGTGACGACCAGAACAGGAAACCGTTGTATGCCCTCCTAAGCTGGAATGCTGACAACCACTTGTACTCAACCTCCCTCAACCCCTCAATGACCTTCTTGAAATGAGTTTCCCAAGCATATAATTTCAAGACCTTCATATGAACTAAAGACTCAGTCATCGCCTTCAGTCTCACATCTTGTGCTTCCATAAGTTTAGTCTGAAACTTGTGTTGCAGTTTTGCCAGTGGAGCATTGCAGATTACAGTGATAATGATGACAACCAATGACGATATCATTGCAAGACCAACTGCATTGTACAGGATTGCCAGAGCAATGCAGAGCTGGACACTTGTTGTCCATGTTTGGTGGAACCAATATGGGAACTCCCCAATGCGGTAGGCATCGACAGTCACGTAATTCATTATTTCTCCAGAAGAGTGCTTCATTTTTGCTAAGTTCGATAGCTTCTGTTGTTTCTTAAAAATAGCTGCTGACAGAAATGACCTCACCTGAAGGCCTAACCTCCGAGTGCGGAAATACCACTGTCTCTGCGACAAAGATTCACAGCATTTGCAAAAGAATATTGTCACAGCCAGAACAATTCCTTCATATTTGAAGGTCCCTTTCCCCAGTGTTACATTGATGAATGCCTTGAGAAGTAATGGGCCTGAGGATAAGGTGAGAACCTTGAGCAATGCAAAGAAACCTGAGATCAGAATCCCACTCTTATGGCAGGAAACAATAGTCCAAAAGACTGATGGTGTGGCATGTGGCTCCGACTGCTTCTTGCTATTCAGCTCATCCAAGAACATCAAGTACTGGTTCTGTGCTCGATCTGTGGAGCCTAAACGCGGTATATCTTTATCTTCAAGGGGCTTCTCATAACCCATCTTCATCAAAGGGTTAAGCCACCAAAATGACATCACACTGAAAAACCCAGCTTTAGCAAAAGGAGTTACATGGATCTCTGAATCAGCCGTGTCATGATCCTTCTCTGTATTCAGGGGCTTGTATAAAGCATTTGCATTTGTTTCATAACCCTCTTCATCATGGCTGTGCCGAATGGCATAAAGAAGAAGGATAAGGGCTCCCGGTAGCAAAAGAACATCTAAGGAAGCTTTAAAGGTGATCTCCTTCTCTTCAACCATGTAAACAACTGAACAGCAACAGATGAATGCTGCACATATGGTCAGACCAACTGACCAAAATCGAACAAATGTTGCTCCAAGAAACCGAGTTCTGACGCTAAAAGTGAAGCTAGTAAGGATCAAATTAAATCCTTGAGCCAAGATCACAAGCCACCAATGTGACTGGGAAATGGAGGAATCCTGACTGAAGCTAATCCTCAGCATCCACAGTCCTAGGCCAAGATTAAGCAAACCCAAGCAGCCATTGAACACTACAGCAGCCAGTTGTAGCGGTGAATTGAACGCGGCAAGCTGTCGCGCAGATGCTCTACTCTTTGGAATTTTGATGAGCAAATGGAGTGCAAGTGCAACAGTGAGCAATGCAGTAATGCCAAACACCACCAGATGATTCATGCAAGTAGATGAGTCCAATATTTCCTTGAAAGCACATGAAACTACATCCTTCTTGGAGCAAATTGGGCTCCCACACAAGTTCATCGTCCAAGAACTTGTGAGGGAACCCATCGGTCCAATCTCTATTGCACCGCCGGTTGAATCAGACAGTTAACTTCCCCTCTCTGTTGTGTGCGCCAATTGCCAAAGCGCGACTCCCAAAAATCACTCCTTTCTTTTTTTCTCCCCGGTGTAAAGACCTTCCGAGTTCCAACCGTGTGTTCTTCCTCCTCGCCGCCGCCGCCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0087000.1 | 11 | 2611728 | T | C |
| Osa11LNT0087000.1 | 11 | 2605845 | T | C |
| Osa11LNT0087000.1 | 11 | 2606707 | T | G |
| Osa11LNT0087000.1 | 11 | 2606710 | A | C |
| Osa11LNT0087000.1 | 11 | 2607413 | A | C |
| Osa11LNT0087000.1 | 11 | 2607838 | T | C |
| Osa11LNT0087000.1 | 11 | 2607951 | A | G |
| Osa11LNT0087000.1 | 11 | 2608213 | C | A |
| Osa11LNT0087000.1 | 11 | 2610121 | T | C |
| Osa11LNT0087000.1 | 11 | 2610297 | T | G |
| Osa11LNT0087000.1 | 11 | 2610299 | T | C |
| Osa11LNT0087000.1 | 11 | 2610334 | A | T |
| Osa11LNT0087000.1 | 11 | 2610716 | A | G |
| Osa11LNT0087000.1 | 11 | 2610758 | T | A |
| Osa11LNT0087000.1 | 11 | 2611306 | G | A |
| Osa11LNT0087000.1 | 11 | 2612487 | A | G |
| Osa11LNT0087000.1 | 11 | 2612946 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0087000.1 | osa-miR5792 | Translation | 5.0 | 15.135 | 1 | 24 |
| Osa11LNT0087000.1 | osa-miR5820 | Translation | 4.5 | 14.831 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR6248 | Translation | 3.5 | 8.298 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR1437b-5p | Cleavage | 4.5 | 14.801 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR160c-3p | Cleavage | 4.5 | 15.474 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR166k-5p | Translation | 4.5 | 17.05 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR166k-5p | Cleavage | 5.0 | 16.147 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR171c-5p | Cleavage | 4.5 | 18.692 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR1432-5p | Translation | 5.0 | 10.727 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR1442 | Translation | 4.5 | 12.828 | 1 | 20 |
| Osa11LNT0087000.1 | osa-miR1428e-5p | Cleavage | 5.0 | 18.565 | 1 | 22 |
| Osa11LNT0087000.1 | osa-miR1320-5p | Cleavage | 3.0 | 21.098 | 1 | 21 |
| Osa11LNT0087000.1 | osa-miR1428f-5p | Cleavage | 5.0 | 18.565 | 1 | 22 |
| Osa11LNT0087000.1 | osa-miR1428g-5p | Cleavage | 5.0 | 18.565 | 1 | 22 |
| Osa11LNT0087000.1 | osa-miR2093-5p | Translation | 4.0 | 12.479 | 1 | 20 |
| Osa11LNT0087000.1 | osa-miR396f-3p | Cleavage | 5.0 | 12.141 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0087000.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0087000.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0087000.1 | 11 | nan | Morphological trait | Panicle/flower | RM286 | RM332 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)