© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0087400.1
AACCATCATTTTCCTGTAAATGTACACTGATCTAAGCATCAGGTGACAACTGACAAACATCCACGAACTGTTAAATAAGTTTATGCACAAATCTTTTTCATCAGATTTCACTTTCTTGTTTTGTTCCTGTAGCTACCAAGCGACGATAAACCGCCAGAGAACACTGACGTTTGCGAATGTGTGGAAGACGACTGAACACGAGGAATGGGTGACAGGCAGCTCCCATTGCTCTTTGGAAGATCCAAATCGTACAGGCCATTTGCAAAGCCTGCTGGTGGCACCTCAACATCGGGTTCTCTAAAGTCCAGAAGTGCATCCCCAGACTCTAGCTTTTCAGGCTCGGCTGTTACACTGTCGAGATCGGTCAGCGATTTTAGCTGACGACCGAGGTTCGCAATCGTCTTCTGGCACTCCACGAGTTTTCCAGCAGCACTGGAGAGCTCTTTATCCTGCTTGACCTTCAGGTCACCATTTGTGTTGGCCAGTCGCCAAAGCCTTGCCTCCCGACTGTCTCTTGACAGCTGAGCCTCTAACTTGCGGCATTTTGCTTCGTACTCCTCTGACAGCAGCTTCTCCTGCTCAATCTTACCTTGCAGCAAGCTTACCCTATTTGTAAGTTTTGTGATTTCCAGTTTAGCTCCTTCAAGTTGGCCTTCCATTGCCTTCCTTCCCACCGCTGCATCCTCGGCCTTGGCAGTGAATTCTACCAACAATGCAGTCTGGTCCTTAAGTCTTACTTCCAACAATGAGATCTTCTCCTGGAGCTTCATGGTTTCCTGGTGTGAACTCTCAAGCTCAGACTCCAACATCTTTCGGATGCCTTCCACTGCCTCTAGTTGCATCTTCAGTTCCGAAGAAAATGCCTTCTCCTTTGCTGCATCGCACTCCAGATCGTTCACTGTTCCATGCAGTTTCGCAATTTCTGAGTTCACTACCAGGAGCCGTGCCTCCAATGCTTCTTTGGCAGATTCCACGCCAAGTTTTTTCTCTGATTCAATCTTCATTGACTCCATTTGGACCACAAGTTCTTCATACATGGTTTTCTCTTTTTGCAACTCGCTCTCCAGTGTTTCAATAGATCCCCTCAGTTTCCCGATATCCGCATGTGCGGACTGCAGTTGTGCCTCTAGTGACTTTTTATCTGCATCTGCCATGTCTGCATATGCTTTGTGCTGCAAAGACAGAGTTCTCTCGGCATCAATCTGCTCTTGCAAGGATGCCACTGTCTTGCAAAGATCCGCTAACTCTACAGAAGTTGACTCTAACTGTGACTCCAGCTCTTTCTTATCTGTACTTTCTTCCAACGAAGCCACAACTGCCTGAAGTTTCTCAACTTCTATTGACTTCGACTCAAGCTGCAATGCCAAAGATCCTCTCTCAGCATCTAACTGATCAGCTTGTCCCAAAGCAGCAATTTTAGACTCATTTGCCAAGTTGAACTGCATTTGTAATTCTGCCAACTTGTTGTTGGCTGCCATCAGGGCATCACACGACGCGTCAAGCTGGACTCTAGCCTCTGCAAGGGCCATTTCAAGATCCCTTTTCTCAGTCTCAAGCTTTTCAACCTTTGCCTGCAAATCTGTGACCTGGCTCTTTAGTGTTTCAGTTTCGACTTTTGAAGCTTTATCTATAGCCACAGCCTGGTCAGAATCAGTTTCTGTTCCAAAGCTAGAGCTTACACGTTCTACTTCAGACAATGCAGCCAGCTTTTCCATCTCAAGGAAATCATCCATCAGGTCAATCTCAACATGATTGTTTACAACATCTCTTGAGCTGGCACTACTGTTCTTGAACTGATCAAGTTCGGCTATCAGAGCCGAGGCCCATGAATCAGAATTTCTCATTTCACTGTCAACAGTCAGCATACGCTCCCCACTGTCAGACTGGCTATCAGTGAGAGATTCCATGCAAGCATTGTTAGGCGCAGGCCTAGAATCATTGGCCAAGGAAGTTCTTCGTGTCAGATGGCGCAGCTTACGGCATTCTGCCTCAACCCTTGCAATCTTTTTCACACTTTCCAAATGTTGTTTACTTGCTGTCTCTGCTGCTTCATTGCTCAGATCTCTTTCCAGTGACAGTCTCTTCAAGTCCTTGGCTAGCGTGAGCAGCTCGATCTTCAGGCCCTTGTTTTCCTTCTCTGCAGCCTGAAGTTTATCCTGCAGATCATGCTGGACAGCCACAGTGGCAGCTTCTAATTTAGCGGCTTCCAGCTGCTGCTTTAGCTCATAAATATGGTTCTGGAGCTCAGACTTGTGAGAATCCAATTCTTGAGTCTTCTTAGCAACTGCATCACGAATTTTCTCCTCTTGTTCTTCCCTAGCTTGGCGAAGCTGCCTGACACATTCTTTGAGAGCATCATCTAGGTGGTTCACTTGATCATCCAAAGAGGCATTCTTCTGAGTTGAAGCTTCGAGTAACCTCTTCAGGGTACTAACTTCAGCTTCAGCTTGTTCCCAACCTGCAACAGCCTCTTCTGCAACCTTTGTATGCTGCTTCACCAAGTCATCTTTAGCATTGATAGTCAAAAGGGCTGAAGCAAGCTTCTCACTCAAACTCTTCACAGAATCTTGCATATCTTCATCTTTGACATTTGTGAAGACATCTGGCTGTGGTGACTGACAATGCTGTGTGGAAGAATCATCTGACACAGTTTCCAACACTAGCTTTTCATTTAAAGATTTTGCTGTTGCAGTTCCTTGAGTCTCATTATCTGTAATTCTTGAGCAAATTTTAGGTGATTGGCTATGATTTGGGGAAGCACCATTCGGAATAGGCTTTTCGCCCGGAGAAGCAATTCCTCCCTCCTCTCTCATCTCCGGTCTCTCTTTCAGAGAACTTGATTCAGACAACTAGAGTATGCTCTCAAGCCACCAAAGTGGAAATCAAACATGTGACCTGATCACCGGAGTGCAATGACATCGAACCAGGGCATTCAAACTTGTGCCTCCAGAGTCAACTCTTGGAGATCCATCTTGCAACCACCGGTCATCAGACAATCAAAGCATCAATAGTGATCACTTGGTCTACCAGCCACCATCAAAAAGCATGGTTTGGATCACTGAAGTCTCTGAGAACCCCCGAATTAAACCCGTCGCCTGGAGAACAGCAAAACCACCACAAGAACCATGTGAACACCAGACCAAAGTTCAGTTTTTTTTTGTCTTTACTGCTACTACTATTCTATCTCTTTCCCTTTCTCCTAGTAGTTTATTTGGGATAAAGATCAGAGGGAAGAACAGCCGCAGATTCACATTGCTCACCTCGCCCACAAAATCAATCACAGATCGAAGCGAACACACGCGGAGAAGGATGAGAGAGAAGCAAGCACAGGAGGTAAAAAAGCAGGAGGTTACTGTACCAGAGCAGCAGCATCACCATGAATGACACCATGCCCAAGAAAGGAGGAGGAGGGAAAAAGGCCACTGCTTTTGACGAGATGAGAGCCTCGAGTGCGTAGAAATCGCAGCAAGAATCCAAAAACCGCCTCCTTTTTTGCTTCCTTTTTTCTCTCTTCTCTTCTTCTTCTTCTTCGCGGTTCGCCTCCTCTCTTTCCCGCCCAGGCAGCTCAAACCAGGACTCACTTTCAGCTGCTGGTGTTCTTGCCTCCCCTCCTCTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0087400.1 | 11 | 3389720 | A | G |
| Osa11LNT0087400.1 | 11 | 3389737 | C | G |
| Osa11LNT0087400.1 | 11 | 3390629 | T | C |
| Osa11LNT0087400.1 | 11 | 3390918 | A | G |
| Osa11LNT0087400.1 | 11 | 3391723 | A | G |
| Osa11LNT0087400.1 | 11 | 3392895 | G | C |
| Osa11LNT0087400.1 | 11 | 3394733 | T | G |
| Osa11LNT0087400.1 | 11 | 3395297 | G | A |
| Osa11LNT0087400.1 | 11 | 3395509 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0087400.1 | osa-miR5526 | Cleavage | 4.5 | 11.583 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR5537 | Cleavage | 4.5 | 23.904 | 1 | 22 |
| Osa11LNT0087400.1 | osa-miR5791 | Translation | 5.0 | 15.874 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR812t | Translation | 4.5 | 16.581 | 1 | 24 |
| Osa11LNT0087400.1 | osa-miR812u | Translation | 4.5 | 16.581 | 1 | 24 |
| Osa11LNT0087400.1 | osa-miR5804 | Cleavage | 4.5 | 17.6 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR2873c | Cleavage | 3.5 | 13.159 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167a-5p | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167b | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167c-5p | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169a | Cleavage | 4.5 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR399a | Cleavage | 4.5 | 17.465 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR399b | Cleavage | 4.5 | 17.465 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR399c | Cleavage | 4.5 | 17.465 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR399d | Cleavage | 5.0 | 17.465 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR399j | Cleavage | 5.0 | 17.465 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167d-5p | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167e-5p | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167f | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167g | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167h-5p | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167i-5p | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169b | Cleavage | 4.5 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169c | Cleavage | 4.5 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169d | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169e | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169f.1 | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169g | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169h | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169i-5p.1 | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169j | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169k | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169l | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR169m | Cleavage | 5.0 | 21.102 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR167j | Cleavage | 5.0 | 22.357 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439a | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439b | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439c | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439d | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439e | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439f | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439g | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439h | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR439i | Translation | 5.0 | 11.994 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR444a-5p | Translation | 3.5 | 21.109 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR528-3p | Translation | 4.5 | 10.995 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR444d.3 | Cleavage | 5.0 | 24.267 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR444d.3 | Translation | 5.0 | 22.372 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR1861d | Translation | 5.0 | 20.08 | 1 | 22 |
| Osa11LNT0087400.1 | osa-miR2919 | Cleavage | 3.5 | 12.257 | 1 | 19 |
| Osa11LNT0087400.1 | osa-miR2919 | Cleavage | 5.0 | 11.162 | 1 | 19 |
| Osa11LNT0087400.1 | osa-miR812n-3p | Translation | 4.5 | 16.581 | 1 | 24 |
| Osa11LNT0087400.1 | osa-miR5338 | Cleavage | 3.5 | 10.155 | 1 | 21 |
| Osa11LNT0087400.1 | osa-miR444d.3 | Translation | 3.5 | 9.758 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0087400.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0087400.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0087400.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)