© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0089400.1
TGAAATCAACTACCTATGACATATATCATGAAACATAACAGTAAAAATATTATACAGCCACAAAAAAAAATGCAAGTTACATTTTAGCATTACAATGGCTGCACGTCCGCAACAATAGTACACTCCTTAACCAATACAACCAGGTCTAAACTAGTCATTCAACAACCCAACCGGAACAATAGTTCACTTATGAACTAGGCACTTATTTTGTTTTTTTTTATAGAAACCAACATATAAATAGTTTTTTAACTGCCAACTACAGCCTCAGATCAATGGAATTGAAGCCTCCAACATGCCGACATAGCAATGTTACTTCGGGTCAGAACGGAGTTTGTGCGGAGTAATTTCTGGGACAACTCTGTAGATGTGCACTTTTATGTTATCCTTCTGGACAAGCTCGAAGACACACACATCAAACTTCTCCAGATTGTTGCCAACAGCAAATTTGCCCCAGCCACCACTGAAAGAACCAACAGAACGATCACTGTAGTAGACATAGTTAACTTCCCAAGCCTTCCCTTGTGGATCCCAGAGTGTGATCCTTTTGTTGGTATGGGGAAGACACTCACGGACAAATTCACATGGGATATTCATGAAAAATCCAACATAGACATATGACTCCATCATTATTTGCACGGCAAAAGGATTCTTAGATTTAAACTCTCTTGCCCTTTGAAGAGCATGGTCCTTCTCTGCTTCAGTTACCGGACGCCTCTGTGATATTACTGTTAGTTGTCTTTGACCCTTTGAAACACATCTACCACGCCGAGACACCTCACCAGACAGAAAGCGCATCAGGAATGGTGGATTTGGTGACTTGCTAGAAGAATTATCTTCATCTGAGCTGCATGATGAACCTATAATGTGCAAAAGTAATTTTTTTGGGAAATCATATGAATCCTTAGGATTCTGAACAAGTATGATGGAAATAAATAAATAAGCAACCTCTAACCAAGAGATTAGAAATATGTCTTTTTGCAATTACTTTGCATGGTTTGGCACCGCGTAGCTTATGGCTATGCATGGAACAAATCAGGAATACAACTAAACAAGTTCTATAAACGAAATGGATGTGGCAAGTCATTTGTGCCGTTATGCAGACCTCCCTGGTCCCCCAACAGTTCAAAATAATTGACTATTAATAGTCATCATCTAAGCTGACTATGCCAAATATGTGTATAACACTTTCAGAAATATAGAAATGTTTTACCTCTGGTACTGTTATGGCTTGTCGATGTTACCTTGGACTTGCCAGCAGAAGCTCCTGCACGTTTTCTCCTAGAACTTTCGCAAACATTAGCCTCAGATGACTTCTTAAATACAACCACCCTATCTTCCATAAGGTAATCTACATCTCTAGTTCTCTTTCCTGTGATTCCATTATTTTCCTTCAGGGCGGGAGCCATTTTCTCTGTTGTGATAGCTGCGGTGACCATGCCCCCTTCATCACTTTCTGTTTTAATGATCACATTTTTGGAAGGGTGAGCAGAGAAAGTTGATATCTTGTCAATGCCTGAAGGTTCAAAGACTGTCACTGAGAATTGTGACCGTTTATCATAAGTGAATACTAAAAATTGACCACACTGAATTGAGTTATCTCTGACAAATTCTTTCCATCCATGCACAAAGAAGAATCCCTCAGAGTCTGAAGTCAGCTCTGCACTCCATTTATTTCCACTTCGATCAACCAGAGAAACCATCCCAGTAGGTTGATTCTGAAGGCATTGGTTGAATGATGATGGGATTTTCTGCATTGTACCAAAGTATAAAATATGTTAATTTATTTTTCTACACTACTTGTTAACATTGTGAACTACTCATACGATGCAATGTCAGTTCAAAAACAAATATATCAGACAAATACAATATGCCACGTCATGTAATTTTTCTATAAGGCATCAAATTGTAAAGACCAGCAAAGCAGTCCTGACATCATAGCCTCAAAAATGCAAAATTACAGAACATACGTGATGTATGACTGGAAAAACTAAATGCTTAGACCAACTAAGATCAAACCTTATCCTGATTAATTGAATTCCTTCTTTTCCCACACCAAAAAATAAAAATGAAAAGTAAGACTCAAACCCTCTGAAAGATAATCCAACCCATTAGCAGAGGCCCATGTTGTGTAAGTTTTTAGCCGCTGAGTTGAAAAATGAAAGGACATCATAGGCAATTTTATTGTAACACAGTGCTTTCTACTATTCTTTGGCCACATAAATGTGAAAATGAACTAAGCAAGTTTGGCAGCTAGCCAGCTACTTTGGGAAAACCACGAAAATAGTAAATGTAGTCGTCATGAACTTCTAACAATAACTGATTGTGTGACCAATACACCTGAGTGTTAGACAAACCTGGATTTGGTAGTGGGAGTGATTACTCTATGTTTTTCTAAAGAACGCTATGAGAACACATACCACCACCAAACAAGGTTAATCAAGATGTTGTTTGCTGACTATGAAAAACCAACTGTGCAGTGCAAATGAAGAGCTACATATCAAAATCAATACTTTAATACGCTCGTGTGAACAATGAAAGTGTATAAGGTTACTAACGAATCAAAGCAAGCTAGTCACACTAGGGAATATACATAACCACCACAAAAACTCGGACATTTATTTGAAAGTGTTTATAGTTACCCTGCAATCATACAGCCACCTTTCGACTAAAACACATACTTCCAAATAATTAATCTAGCGAACACAATCCACATCCGTGGGATTCGCAAAAAGGGGGGACAAGCATATAGCTACCCTGCAACCAAACAACCGCCTTGGGGAAAACACATACTCCTAAATCATTAATCTAGCGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0089400.1 | 11 | 4895256 | C | T |
| Osa11LNT0089400.1 | 11 | 4895401 | T | C |
| Osa11LNT0089400.1 | 11 | 4895402 | A | G |
| Osa11LNT0089400.1 | 11 | 4895428 | A | G |
| Osa11LNT0089400.1 | 11 | 4895878 | T | C |
| Osa11LNT0089400.1 | 11 | 4896345 | G | A |
| Osa11LNT0089400.1 | 11 | 4897203 | G | A |
| Osa11LNT0089400.1 | 11 | 4897881 | A | G |
| Osa11LNT0089400.1 | 11 | 4896674 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0089400.1 | osa-miR393a | Cleavage | 5.0 | 17.439 | 1 | 21 |
| Osa11LNT0089400.1 | osa-miR319a-5p | Cleavage | 5.0 | 20.257 | 1 | 21 |
| Osa11LNT0089400.1 | osa-miR393b-5p | Cleavage | 5.0 | 17.439 | 1 | 22 |
| Osa11LNT0089400.1 | osa-miR166j-5p | Cleavage | 5.0 | 18.15 | 1 | 21 |
| Osa11LNT0089400.1 | osa-miR1438 | Translation | 5.0 | 13.487 | 1 | 22 |
| Osa11LNT0089400.1 | osa-miR1859 | Translation | 3.5 | 15.055 | 1 | 22 |
| Osa11LNT0089400.1 | osa-miR2100-5p | Cleavage | 5.0 | 20.011 | 1 | 22 |
| Osa11LNT0089400.1 | osa-miR2118d | Translation | 4.0 | 16.776 | 1 | 22 |
| Osa11LNT0089400.1 | osa-miR2878-5p | Translation | 5.0 | 14.365 | 1 | 24 |
| Osa11LNT0089400.1 | osa-miR5145 | Cleavage | 4.5 | 14.393 | 1 | 24 |
| Osa11LNT0089400.1 | osa-miR5517 | Cleavage | 4.0 | 16.767 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0089400.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0089400.1 | 11 | fer11 | Resistance or Tolerance | Cold tolerance | RM3701 | RM552 |
| Osa11LNT0089400.1 | 11 | dc11 | Resistance or Tolerance | Cold tolerance | RM552 | RM3137 |
| Osa11LNT0089400.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0089400.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)