© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0007400.1
AAAAATCTTAATTCTATTATTGCGGGTGTATATATATAATTACAGATCACAAACCCTTTTTCAGTTTTCGACCCAGTCCTACATGAAACAATCAACCAAAATCACCACTTGAAGCTTGTAGATCACTTTCAGATAATTCCATCAAGAATGAGATCAATGACATACACGGCCATTTTCCTAACTTATCATACAATTTTTCTTTTCTCCTTTTTCAGGCAAACTGCTCTCCTTCACACGGTTTGCAGAGCTAGCATTCGCTCCATCCAGTCGATGATGTCTGTGGCGATCTCATCACGCTCAGGCTCAAAGAGCAGATCGTGCAAGAACCCATCGTACAGCCTCAGATCCTTGTGCCTCGATGAGGCCTCGTTGTAGAGGTCCTGTGAAGCCAGGGGGTCGGTCACCCGGTCTGCGGTTCCATGGAGGACCATGAATGGGACGGTGACCTTCTTCAAGTTGTGCAGCAGGTAGGAGGAGATGCGTAGGATTTCATGGCCGGTCCGAACTCTGATCGGCCCGGTGTAAACCAGCGGATCGGAGTACTTCGCTAGCAGGGCAGCCGGGTCGCGGGACACCGGGATGCCTCTCTTGTTAGCTCCCTTGAACTGAAACTTTGGTGCTAACAGAGAGAATATTGGCGCCACAGCCCCTACAATGGGATGAGCAGGTTTTACACGCAGAGCTGGTGAAGTTAGGATGATGCCTTCCAGTTTTGCTCTGATACGAGGGAACAATGATGCCTGGAAAATACCAGCTATTGATAAGCACAAGGGAAAGAAGAACATGAAGCATGTAAAATGAACATATCTGCAGCCAAACCATTTCAAGTTTTCAACCAGGCTATTTTGTTAATGCTTTGCACCATTGCTCTGCCCGTCACGATATCCATTATTCACAGGCCCAGAGGAGTAGGGTCAGTTTCTAAACCTGGCCTAAATAGAGCTGAGAAAAACTACTTATTGTTACAAGGCATACCTTCAAAACAACAGCTCCACCAGTGGAGTGACCAAGAAGAAAACAGGGGACCCCTGGATTCTCAAGCACAATTTTACCAAGAAGTACATCTATATCTTCTACAACATAATCTAGTGAAGGCACATAACCATGTAGACCATCGCTTCCACCATGGCCTATCCAGTCCATTGCATATACTCCAAAGCCACATGATGTGAGCAGCTCCGCAAAGTGCAAATACCTTCCACTGTGCTCATTAAGCCCATGTATGATGACCAAAATACCCCTCATCTCGGCGGCGGCGGCGGCGGGCGCCCAGACGCGGCAGAAGAGCGCGTTCCTCCTCGCCCCGGGGACGACGAACGTCTCCCACCGCCTCGCCCCCTCCCCGTCCGCGTCCTCCACCATGGCCACCTCCTCCGCGAGCGCCCTCCTCCGCCGCACGTCCTCCTTCTCCGCCGCCCTCCTCCGCGTCCTCACCGCCCTCCCCGCCTCCGCCCCCTCCCCCGCATCGCCCCGCCTCCGCCGCCAGCCGCCGCCGCCGACGAGGAGGAACACCCACAGGAGCAGCGAGTGCAGCGCGACGGCGAGGCGGAGCAGCGCCCGCCGCGACAGCACGGAGCGGAACACCGGCACGATCCGCCCCGTCGCCCCCGACGTCATCATCATCTCCTCCCCTCCTCCTCCTCCGCCCTCCATGGCCGCCGGCCGACTCCTCCCCTTCGTTTTACTTTTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0007400.1 | 1 | 5390691 | G | C |
| Osa01LNT0007400.1 | 1 | 5391031 | A | T |
| Osa01LNT0007400.1 | 1 | 5393045 | T | C |
| Osa01LNT0007400.1 | 1 | 5393260 | A | T |
| Osa01LNT0007400.1 | 1 | 5394104 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0007400.1 | osa-miR5819 | Cleavage | 4.0 | 7.282 | 1 | 21 |
| Osa01LNT0007400.1 | osa-miR5821 | Cleavage | 5.0 | 12.553 | 1 | 21 |
| Osa01LNT0007400.1 | osa-miR319a-3p | Translation | 4.0 | 20.558 | 1 | 21 |
| Osa01LNT0007400.1 | osa-miR413 | Cleavage | 3.0 | 22.359 | 1 | 21 |
| Osa01LNT0007400.1 | osa-miR1320-3p | Translation | 4.5 | 22.14 | 1 | 21 |
| Osa01LNT0007400.1 | osa-miR2877 | Cleavage | 4.0 | 15.492 | 1 | 24 |
| Osa01LNT0007400.1 | osa-miR5487 | Translation | 4.0 | 5.565 | 1 | 21 |
| Osa01LNT0007400.1 | osa-miR5494 | Cleavage | 4.5 | 7.849 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0007400.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0007400.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0007400.1 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0007400.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0007400.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0007400.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0007400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0007400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0007400.1 | 1 | sp1a | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0007400.1 | 1 | dn1a | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0007400.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0007400.1 | 1 | gn1 | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | gp1a | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | qSS1-2 | Morphological trait | Seed | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | qSSB1-1 | Morphological trait | Panicle/flower | RG532 | G359 |
| Osa01LNT0007400.1 | 1 | qTNSP-1-1 | Morphological trait | Panicle/flower | RM1 | RG532 |
| Osa01LNT0007400.1 | 1 | gw1a | Morphological trait | Seed | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | qLS1-2 | Morphological trait | Shoot/Seedling | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | qSW1-3 | Morphological trait | Seed | G359 | RG532 |
| Osa01LNT0007400.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0007400.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0007400.1 | 1 | ph1.1 | Morphological trait | Dwarf | RM220 | RM272 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)