© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0090200.1
CCAGAGAGAATGAATCCGAGTTAACCAAGGGGCCAAAAGAGATCAAAGCATATGGTTGGTATATTAGGTCCAACTAGATTACCTGCACTTCTAAATCCATTATTTGGGCACTACAGTTACAAATTCTGTCTAGATCATTTCGTCAGTTCTAAACCGCCCCTATGAGGCTGAGACTGCAAGAATAGGGCATGCTTGTCACAGCAGATTAAGCACCAACGCTCTGAGTAGCAGTAGATCCTGGAGAGCCCAACTTTAAAACGCTACTCGAAACTGAAACCTGTCAAAGAAAATGTAGGGTAAGTTCACAATCTGAGGCAGTAAGCATCATCTGCAGATATTACAATGTTCAGTTGCTTGACAGTAAATTTAAATACCGGAACAGATTGTGAACTATGAAGAGAGGGGATGATCTAATCTTATCTAAATATATGTCTGGGACTTAACCGATCAGATGTGGGGGAGAAATATTTACTCCGGTTAATGACTTAACCGATCAGATGTGGGGGAGAAATATTTACTCCCGGTTAATAACACCAACCGATACTAAAGATCTAAATGATCATTTAACCGGGAGTAAATGATAATCTTTATCCCAGTTGGTAGTATCAACCTGAACTAAAGATCCTCGGCCCCCTGACATGCCTCTGACAGAGGATGAACCGGGACTAAAGATGATCCTTTAAGATCAAAATTTTTTTAACCGGCATTTTTAGTCCCGGTTTTTAATGTGAAATTTGATCGACCTACGAAAAATGGTTTCTCCACCCATGAACACACGCCCAAATAGTCAAATACATTACCAGATGTGTGTACTATTAAACATTACTGGCGGAGAAATGTTGATTAAAGCAAGATAGCAGATTCATCATCCCCGAGAGAATGGATCCGAATTAACTAGCATAGTTCCAACTAGATTACCTGCCCTTCTTAATTCCGTCTACTACAGATTCTTACTAGGTCATTGTCAGTTCTAAACCGTTCGTGTGGCTAAGAACTGACATAGGATATACTAACTCCATCCCATAATACAGCAACCATCTCAGTTGTCACAGCACTGAACAGTAAATAGACTAGTAGATTCATGTACAGCCCAATTTTTGAACCCTACTCGAAACTGAAACGAATATTAAATGTAGACAGGAACTTCAAAACTTTGGTAACTCTCTCATCAATCACTCCACATTTGACTACGACTGACTTAAGATGCTCTGGTATTGCAGATGACCTCTCCGTTTGATTATAGCTTCCTTTCATTTCCAATATATGTTCAGATTCCTGACAAAAAAGCTCAAGAGTGAGTTTCTCTAGAACTGGTGAGTGTCGAAGGATGCAAGTTATTCCATGCAAGTCGAAGGCCACGTAGAAGGAGTCAATGAGTAACAAAGTCTTCAAGTTACTAAATGTAGGGCACCGCATCATGTCTCTTTTGAAAACAAACTCTTGATTCTGAGCTACCAACATCAAACTCCTAGCCTGTGATAAAGCTTGCAGAAGCATTCTGTTGGTGTTACTATAACAAAGCTCACAATCGTCATGAGGGCATTCCTCGGAGTCAGCATTACCACTTGTACAAGTTAACCAATCCCCAGAGTCACCGGTTACACTGACAAATGCTTTCACTAATAGCGGCATAACCTCAAACACAGGAGTCCGGCAGCGATAATCTTGTAGCCACAGGGAAAGTAGATTCGGCACATCAATACGAATTCGGACATTTTCGCTGAAAGTGCAATGAGTAAGGTTGAGGTGTTTCAGGGACTGGGAAGAGATCCTCTTGGCATCTGACAACTCGGAGGAGACAATCTCTAAATTTTCTAGCACCGGACAGCTAGAGAAATCAAGGAAACTGTGCATCAATATCACAAAACGAAGCTCTAGCTTCACCAAGTGCCGGGAGACGAAAGGCAGGTCGTGTAGCTCGAGGCCGAAGACATTCAGCCGGAGCACCCGGACTTGGCACAGCAGGGCATGCCGGAACCAGAGGTTCATGCTGCGGTTGTCTCCCTCGGCCAAATCGATGGAACCTAGCTCAAACGTGTCGAGGGGCGCGCCCCCGCGGAGGAGCAGCAGGTGGTGCACGAAATCATGGAGCTTTTCCACACCGTAGCCTTCGGAGATGCGCAGGCCCGTGGCGGACTTCCAGAGGTGGCGCCAGCGCCGTGCGAGCAGGCACGTCCGCACGGCGTCCGGCGCCGGCAGGAACCCGAGGATGTGGTGGAGGACCCCATCCGGAAGGCATCCAATCCGATCCTCGTCGGCGCCGCCGCTTCGAGATGGGGATCCCTTAACCCTTTTCCCCGTCTCCCCTGGACGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0090200.1 | 11 | 5634292 | C | T |
| Osa11LNT0090200.1 | 11 | 5631230 | A | G |
| Osa11LNT0090200.1 | 11 | 5631231 | A | G |
| Osa11LNT0090200.1 | 11 | 5631233 | G | A |
| Osa11LNT0090200.1 | 11 | 5631388 | A | G |
| Osa11LNT0090200.1 | 11 | 5631444 | A | G |
| Osa11LNT0090200.1 | 11 | 5631354 | A | G |
| Osa11LNT0090200.1 | 11 | 5631470 | T | C |
| Osa11LNT0090200.1 | 11 | 5631748 | T | C |
| Osa11LNT0090200.1 | 11 | 5631820 | G | A |
| Osa11LNT0090200.1 | 11 | 5632036 | A | C |
| Osa11LNT0090200.1 | 11 | 5632124 | A | G |
| Osa11LNT0090200.1 | 11 | 5632140 | A | C |
| Osa11LNT0090200.1 | 11 | 5632339 | T | C |
| Osa11LNT0090200.1 | 11 | 5633877 | T | A |
| Osa11LNT0090200.1 | 11 | 5634009 | G | T |
| Osa11LNT0090200.1 | 11 | 5634060 | A | G |
| Osa11LNT0090200.1 | 11 | 5634170 | A | G |
| Osa11LNT0090200.1 | 11 | 5634517 | A | T |
| Osa11LNT0090200.1 | 11 | 5634685 | T | G |
| Osa11LNT0090200.1 | 11 | 5634717 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0090200.1 | osa-miR5814 | Translation | 4.5 | 12.823 | 1 | 24 |
| Osa11LNT0090200.1 | osa-miR5079b | Cleavage | 5.0 | 15.288 | 1 | 22 |
| Osa11LNT0090200.1 | osa-miR5079b | Cleavage | 3.5 | 16.639 | 1 | 22 |
| Osa11LNT0090200.1 | osa-miR1850.1 | Translation | 3.5 | 19.126 | 1 | 21 |
| Osa11LNT0090200.1 | osa-miR1882e-3p | Translation | 4.0 | 10.884 | 1 | 24 |
| Osa11LNT0090200.1 | osa-miR2094-5p | Translation | 4.5 | 15.873 | 1 | 21 |
| Osa11LNT0090200.1 | osa-miR2120 | Cleavage | 4.5 | 22.905 | 1 | 24 |
| Osa11LNT0090200.1 | osa-miR5079a | Cleavage | 5.0 | 15.288 | 1 | 22 |
| Osa11LNT0090200.1 | osa-miR5079a | Cleavage | 3.5 | 16.639 | 1 | 22 |
| Osa11LNT0090200.1 | osa-miR2120 | Cleavage | 4.5 | 17.911 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0090200.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0090200.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0090200.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0090200.1 | 11 | qRRE-11 | Resistance or Tolerance | Other soil stress tolerance | C496 | C410 |
| Osa11LNT0090200.1 | 11 | fer11 | Resistance or Tolerance | Cold tolerance | RM3701 | RM552 |
| Osa11LNT0090200.1 | 11 | dc11 | Resistance or Tolerance | Cold tolerance | RM552 | RM3137 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)