© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0090400.1
ATATGTTGGTTTTAAAATGGGCTAATAGTAGGAAGTGAACTCTACCATTATCCTTGCTCTAGCATGGATTGAATTCTGAAGTAAAGGGGGAACTAGGCAACAGTGAAGCAAATGCTATAGTGTTGCTTGCATTGTGTCAACCTGTCCAAATTAATGAAAAGTTTGGAAGGAAAAAAGACTTATAAAACTAAAAACACAAGTAAAAACAGTAGTAAGCTTGTGCAGGTTGAGACTACATAGATATCAACTACTCTACATCATATTACATTTTTTTCCCCATTGCCATCCCAATTACAGGACTTGGCTATTTATGTCTCCTCTCCACACTGTTCAATTGGTCTTCTGAAAGATATATTCCCTAAAGTTAAGTTTAGTGTCAATGTGCCATATTATCTGCATCCAATCCAGCTTGCCTTGGCACCAACAGTTTGAACATCCTTACCTGTTGCTGGGACCAGGTTGTTCATTACGAATTTCAGTAATTACTAGTCCAGCCTGATGACCTATCACAACCCGTTTTGAACCCTTCAAACAAACTATAGCGCCGACTTTTCCAAGTTCAAAGTCCAGTACACCCTCAAGCTTGAAGGTAATTGAGTTCCACAGACGAACTGTCTCATCATTAGAACCTGTAAGTAGGATTGGCAGGTCTGGATGGGAACAAACACAGGTAACACAATCCATATGCCCTATGAGTATTTGAACACAAGTCCTGCTCTTGCAGTCCCAGATCCTAGCCGTTTTGTCCAAAGAACCAGTTATTATGTATTGCTGATTTCCACGAGTGAAGTAATCGAAACAGCTCACTGCAGATCCATGCCCAAACAATGTGAATTCACGACGGGAAGAACGGAAATTCCAAACCTGTACATTCATCATGGAAGCAGCCGCAAATTTGTATGAATCGTGCGGGTTAAATTTGATTCCATGTGCTAGGACACCTTGCATGTCAAACATCCTAATGCACTCCCAGCCCTTGTTCCAGTCCCACATCTTAATTGGGTCAAGCAAGCCGACCGACAGCACATAAGGCTCAGTTGGATGAACGTCCAAACAGGTGATGTTCCATGAATGAGCTTTGAATCTCTTCACTTGCTGTACAGGGGATTCGTATGTGTACACTCTTATGAAACCATCATGATATCCAACCACAAGCCATTGCTTCCGCGCAATCAACTTGGCTGCGCTAGCTCTTGGTCCAAATGAGCTTTGAAGCAGGTTCACTGTTTCTTGTGTATCACAGTTCAGGATGTCGACTGAGCCAAAAATATTGCCTGTCAAAATCCATGGCTCAGTGGGATGCGCATCTATGGGAATGTCAGGATTTTCCATTGGAATGATCTGATGCACCTCTCGGTCCTCTTCTTTCTCTTTGAAAGAAGAACCGTTATGGTGATAAGCTTCTTGGTTTACTTGGGTGTCACTTAAGTTCAAATGGCTGGCCAACCTGCTCTCAAGGGTGATAAACTCGTCGCTGTATGAGGTTTGCTTCTCGCGGTGGTCGTTGACGAACCGGACCTCTGAGCCATGGCTTATCGGCAACTTGCCAATCATAGTTTCTGTCTCATTAATCTTATTGACGATATCCAAAATATTGGGTCTTTTGTGTCTATCAATCTCCACACATTTCAGAGCTATTTCAGTGCACGTCTTCACCTGTTGGCGATATGCTTCCAATGAGGAACCATTCCATGTTGCTTGTAACCTGACTGTCCAATTTCCTAGTACTAGATCAGTAAATTCTTGGGAAGACATTTCAGCACTTCTAGAGCGCCCTCTAGGTCCTGCAATTACGTTTAGCATTACAACACCCAAGCTGAATATGTCTAGCTTGTTTGAGAGTACATTCTTCTCTATGTATTCTGGCGGCAGGTATCCGACTGTCCCAATTGGAGTTTGTGTGACCCTTGTTTTCTCTTCGGTGAAGAGCTTGGACAATCCAAAATCCGCAAGTTTTGGCACCATGTTCTTGTCCAGCAATATATTGCCCGGTTTAAGATCCAAATGGTAAATAGGTGGCTTCAGTCCCTCGTGGAGATATTTTAAACCCTCACATGTCCCTTTAATAATTTTGAACCGTGTAGGCCAGTCAAGACCATGAAATTCGTCTGAAAGATGATTCTCAAGGCTTCCACCGGTTAAATACTCGAAGCAGAGCGCTCTATGTATTATTGCAGCAAAAACTATTCTTCCTTTGTACTCTGCGTATTTATGTTGTGTTTCATAGCAGTAGGCAACTAGCCGTACAATATTTGGATGCTCGAGCCTCATAAGGTTCTGAAATTCATTCTCGAATTGCTTATCGTCAAATCCTAGAGTATCATTATGAAGCATCTTCACTGCAATCTCTTTTCCATTTCTAAACTCTCCCTTATAAACTGTTCCATATGCACCTTGACCAATTTTTCGCTCCTCGGAGAATCCATCTGTAATTTCTTCTAACAATCGGAATGTTATATCCGTTGGGTCCATAGTTGAATCTGGAGCTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0090400.1 | 11 | 5835139 | G | A |
| Osa11LNT0090400.1 | 11 | 5835141 | A | G |
| Osa11LNT0090400.1 | 11 | 5835275 | C | A |
| Osa11LNT0090400.1 | 11 | 5836756 | T | C |
| Osa11LNT0090400.1 | 11 | 5837150 | G | A |
| Osa11LNT0090400.1 | 11 | 5837175 | T | A |
| Osa11LNT0090400.1 | 11 | 5837249 | T | G |
| Osa11LNT0090400.1 | 11 | 5837255 | T | C |
| Osa11LNT0090400.1 | 11 | 5838464 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0090400.1 | osa-miR6253 | Cleavage | 3.5 | 11.088 | 1 | 22 |
| Osa11LNT0090400.1 | osa-miR166d-5p | Translation | 5.0 | 18.116 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR396a-3p | Cleavage | 3.5 | 12.484 | 1 | 20 |
| Osa11LNT0090400.1 | osa-miR396b-3p | Cleavage | 3.5 | 12.484 | 1 | 20 |
| Osa11LNT0090400.1 | osa-miR160e-3p | Cleavage | 4.5 | 13.992 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR171c-5p | Cleavage | 4.5 | 18.279 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR1425-5p | Cleavage | 2.5 | 14.589 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR1855 | Cleavage | 5.0 | 10.627 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR2920 | Translation | 3.5 | 22.372 | 1 | 23 |
| Osa11LNT0090400.1 | osa-miR2922 | Cleavage | 4.5 | 13.989 | 1 | 20 |
| Osa11LNT0090400.1 | osa-miR5073 | Translation | 5.0 | 12.003 | 1 | 23 |
| Osa11LNT0090400.1 | osa-miR5495 | Translation | 5.0 | 21.023 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR1858a | Cleavage | 4.0 | 24.002 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR818f | Translation | 4.5 | 15.554 | 1 | 21 |
| Osa11LNT0090400.1 | osa-miR1858b | Cleavage | 4.0 | 24.002 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0090400.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0090400.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0090400.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0090400.1 | 11 | dc11 | Resistance or Tolerance | Cold tolerance | RM552 | RM3137 |
| Osa11LNT0090400.1 | 11 | fer11 | Resistance or Tolerance | Cold tolerance | RM3701 | RM552 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)