© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0090500.1
CAGAATATGCTGGGACTGTTAATTCATTCAAAAAAGAAAAAAAAGCACTGGGATGCAAAAGGAATGAGAAAAAACAAAGTTTGTTTTCTTAATACAGGTAATATCCACTACGTCAGATTACAAAACTTTGGTTATCCAAGTCTTCTCTCCACGTTGCTCATTTAGTCTTCTGAATGAGTTAATTAAGCGCAGTACCATTATCTGTCTCCAATCCAGTCTGCCTAGCTTGACACCAACCCTCCAACAGTTTGAATATCCTTATCTGTTGCTGGGACCAGGCTTTTCATGGCGAATTTCAGTAATCACTAATCCAGCATCATGTCCAATCACAACTCGTTTTGAGCCCTTCAAACAAATTATAGCAGTAACTTGTCCGAGCTCAAAGTCCAGTACACCCTCAAGCTTGAAGGTTATGGAGTTCCACAGACGAACTGTCTCATCATTTGAACCTGTAAGTAGTATTGGAAGATCTGGATGGGAACAAACACAGGTAATGCAATCCGTATGTCCTTCAAGTGTTTGAACACAAGTCCTTCTCTGGCAATCCCAGATCTTGGCTGTTTTGTCCCAGGAACCAGTTATCATGTACAGTTGATTGCCTCGAGTAAAGTAATCCAAGCAACTCACTATATATCCGTGCCCAGACAATGTGAATTCATGACGGGAAGAACGGATATTCCAAACCTGTGCATCCTTCAAGCTCGCAACAGCAAATTTATGTGTATCTTTTGGGTTAAATTTTATTTGATATGCTAGGCCATGGAGGTCAAATGTCTTAATGCACTCCCAGCCCTTGTTCCAGTCCCACAGCTTGATCTGGTCTTGTGAGCCTATTGACAGTAGGTAAGGCTCAGTTGGATGGACATCCAAAGTTGTGATGTTCCATACATGAGCTTTGAATCTCTTCACTTGCTTTACTGGGGACTCATATGTGTAAACTCTTATGAAACCATCTTGATGTCCAACCACAAACCATTGCTTTCGCGCGATGAACTTGGCCGCGATAACTAGTGGTCCATATGAGCCTTGAATCAGGTTCACTGTTTCCTGCGTATTACAGTTCAAGATGTCAACTGAGCCAAACATATTGCTCGTCAAGATCCATGGCTCTGATGGATGCACATCTCTTGGAAAATCAGGATGTTCCATTGGGATGATCTGATCTTCCTCCTGGTCCTCCTCTTTCTCTTTGGAACATGATTCGTTATGGTGATCTTGGTTTTCTCTGGTCTCATTTAAGTTCAAATGGCTTGCCAATTTGCTCTCAAGGTTGATAGACTCGTTGTTGTATGAGGGTAGCTTCTCCAAGGCATGGTCTATCGGCAGCTCACCAATTATATCTTCTTTCTCATTAATTTGATTGATGATTTCCAATATATTAGGCCTATTTTCCCTATCAATTTCCAGGCATTTCAGTGCTATCTCAGTGCATGTCTTTACTTGCTGGCAATATGCTTCCAGTAAGGGACCATTCCTTCTTGTCTGTAACCTGTTTTTCCATTTCCCTTGTACTTGATTGGTAAATTCTAGGGAAGGCATTTTCGTGCTTCTGAAGCGTCCTGTAGGTCCTGCAATTATATCTAGCATTACAGCGCCCAAGCTGAATATGTCTAACTTGTTTGATATTTCTTTCCTCTCTATGTATTCTCGTGGCATGTATGGGAGAGTCCCAACAAGATTTTTTGTGATCATTGTTTTCTCTTCAGTGATGAACCTAGACAAACCAAAATCTGCAATTTTTGGCACCATGTTGTTGTCTAGCAAAATATTGGCAGGCTTTAGGTCCAAATGGTAAATAGGTGGGTTCATTTCCACATGGAGATGTTTTAAACCCTCGCATGTCCCTTTAATAATTTTGTACCGTATGGGCCAGTCAAGACCATCATCTTCATCAGAAAGATAGTTTTCAAGGCTCCCCCGAGGCATATACTCAAAGCAAAGTGCTCTATCTATGGTTGCAATCAAAGCTAGTCTTCCTTTAGCCAGTCCAGTTGTATATTTTATTTCATAGCAGTATCCAACTAACCGTATAATGTTTGTATGGTTGGCCATCATAAGGTTCCCAAACTCATTATTGAATTTATTATCGTCAAACCCTTCCGTGTGAAGAATCTTCACCGCAATTTTATCTCCATTTTTATGCTCTCCCTTATAAACTGTTCCATATCCACCTTTACCAAGCTTTCGCTCCTCAGAGAATCCATCTGTAATTTCTTTTAACAATTGGTATGGTACATTAGTTGGATTCATAGGTGAATTTGTAACTTGTCCGTGTTACCAATCTCTCTTCTGGTCCACCTGGAGATATATTTGACGATCGCCTAGCTTCTCGAGAGGCTAGAGAGGAGGAGAGATCAGGCTCAATCTATCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0090500.1 | 11 | 5873773 | T | C |
| Osa11LNT0090500.1 | 11 | 5873807 | T | G |
| Osa11LNT0090500.1 | 11 | 5874615 | T | G |
| Osa11LNT0090500.1 | 11 | 5874886 | T | A |
| Osa11LNT0090500.1 | 11 | 5875539 | A | G |
| Osa11LNT0090500.1 | 11 | 5875851 | T | A |
| Osa11LNT0090500.1 | 11 | 5876393 | C | T |
| Osa11LNT0090500.1 | 11 | 5875255 | T | A |
| Osa11LNT0090500.1 | 11 | 5878423 | G | A |
| Osa11LNT0090500.1 | 11 | 5879103 | C | T |
| Osa11LNT0090500.1 | 11 | 5879677 | A | G |
| Osa11LNT0090500.1 | 11 | 5880005 | A | G |
| Osa11LNT0090500.1 | 11 | 5880229 | G | C |
| Osa11LNT0090500.1 | 11 | 5880385 | G | C |
| Osa11LNT0090500.1 | 11 | 5880431 | G | C |
| Osa11LNT0090500.1 | 11 | 5880827 | C | G |
| Osa11LNT0090500.1 | 11 | 5880859 | C | T |
| Osa11LNT0090500.1 | 11 | 5880993 | G | A |
| Osa11LNT0090500.1 | 11 | 5881491 | T | A |
| Osa11LNT0090500.1 | 11 | 5875094 | C | T |
| Osa11LNT0090500.1 | 11 | 5873911 | G | A |
| Osa11LNT0090500.1 | 11 | 5877952 | A | G |
| Osa11LNT0090500.1 | 11 | 5878048 | A | G |
| Osa11LNT0090500.1 | 11 | 5877933 | T | C |
| Osa11LNT0090500.1 | 11 | 5878138 | A | G |
| Osa11LNT0090500.1 | 11 | 5878145 | C | T |
| Osa11LNT0090500.1 | 11 | 5878155 | T | C |
| Osa11LNT0090500.1 | 11 | 5876073 | G | A |
| Osa11LNT0090500.1 | 11 | 5876464 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa11LNT0090500.1 | DTM_#DNAt_MULE_japo_Os2081 | Chr11 | - | 5877884 | 5878254 | 370 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0090500.1 | osa-miR5525 | Cleavage | 4.5 | 15.727 | 1 | 22 |
| Osa11LNT0090500.1 | osa-miR5525 | Cleavage | 5.0 | 15.246 | 1 | 22 |
| Osa11LNT0090500.1 | osa-miR5537 | Cleavage | 4.5 | 19.921 | 1 | 22 |
| Osa11LNT0090500.1 | osa-miR5542 | Cleavage | 4.5 | 16.58 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR2873c | Cleavage | 5.0 | 13.821 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR164a | Cleavage | 5.0 | 14.309 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR164b | Cleavage | 5.0 | 14.309 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR399k | Cleavage | 5.0 | 14.113 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR164c | Cleavage | 4.0 | 14.309 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR166i-5p | Cleavage | 4.0 | 14.649 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR164f | Cleavage | 5.0 | 14.309 | 1 | 21 |
| Osa11LNT0090500.1 | osa-miR1442 | Translation | 4.5 | 17.187 | 1 | 20 |
| Osa11LNT0090500.1 | osa-miR1873 | Translation | 4.5 | 15.519 | 1 | 24 |
| Osa11LNT0090500.1 | osa-miR2922 | Cleavage | 3.5 | 8.56 | 1 | 20 |
| Osa11LNT0090500.1 | osa-miR2928 | Translation | 3.5 | 14.317 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0090500.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0090500.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0090500.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0090500.1 | 11 | dc11 | Resistance or Tolerance | Cold tolerance | RM552 | RM3137 |
| Osa11LNT0090500.1 | 11 | fer11 | Resistance or Tolerance | Cold tolerance | RM3701 | RM552 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)