© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0091300.1
CACCCCCTAAAAAATAGTAATTGTAGCATGTGCTGTCACGACAATAGGACATCATATCCAAAACTTAAGTGCCACTAAACTCTGGCTGTGTTTAGATCTAAACTTCAGTCCTTTTCCATCACATTAACCTGTCATACACACAACTTTTCAGTCACATCATCTCCAATTTCAACCAAAATCCAAACTTTGCGCTGAACTAAACACAGCCTCTTAATGGAACCATCATTGACCATTGACTAAACAACTTGTCTGTATACTCATAAAATACACCAGGCATATCATATTCACCATTTCACATCCATCTAATATTGGAGTCAAGTCAACTATTGCCAAGTTGTACTGCTGATGCTTCATTTCAGCTCCTGCTTACCCAGTATTCACACCCCCCCCCCCCCCTTCTCTTCCCTGGAGAAGAAATCCGTTCATCTCCTCTGCCCTGCTGCGTCCTTTGGTTGTTGTGTGAGCAGCAGCTAGCACCTCTGCAGCGGGAAGCCACGTGAAGATTCTAGATCCTTGTCATGTACAAGAAGGCACCATGCCATTCGGCAGCTCACTCACAGCAGGAGAGACATCTGAAAGCCCCATATTGTTGAAAGAATAATGCAGTTGATCTTTTGAGCTTGATTGGTCTGCAAAATTGTTTTGTTTGTTCAGCACAGAAGAGGATTCCAATCCATGGTCAAGTTGCATTTTGTTGTTCATGTCAATCACTTGTTCTGGTCCCTCTGGTGCAATAGAATATTCTGTAGTCTCACTTTTGACTGCCTCCATTACACTATCAACGTCTGTATGTTCACTTTCTGCTGTATCAACAGATTTGAGAAGCAATACTTTTGGCCTATTCGGATGCTCCTTAGCAGCCTTTACCCATTCCTGTCTTGTAGCTGGAGTGACTCCAGAATGAAGAGTTACCTCCTGAAGATGTTTAAAACATTCAATTTTGATGTCAGAAAGGCCATGTAGATCTTTGCATAGCAGCTGAAGTGTGACAAGAAATGGCAGAGCTCCTTCTTCAATTACTGGGAATGTTGGACATTGTAGCACAATACAAAGGCATAGCAGCCTGGGGAACCCCTGAACTTTTATGATGAACTTCTCAAGTTCATCGGCAACCAGTTTGAGATACTGCAAGTAGCTCAAATTACTCAAGGCTTCAAGAAGGCCTGTTGTAAATTTAGTAGATGAAAGGCAAAGCTCCTTGAGACCACGAAGTGATGTAACAAACTGAGGCAATTGGGGGAAGTTGCCATGTAATTTCAACGAGCTGAGGTAGCAGGGTTCTTTTAAGGAATTTATCGCATCTTCAGAGCATCCAGTGAAATGAAGCGATAAAGAACGGGTACCAATATTTGCTTCCTTTTCATCCAGAATGAACTGTTGAATGGCCTCCCTAAGATCAGTCCAATCGGTGCTACCTGCAGACGACGTACACCAAATCTTCAACTTTCTCAACTTATTCATGTACCTCATAAGATGCAGAAACCCTTCGCTTCCGTTGCTAGCAAATCCTGCTAGCGTCTGCAAGTTGCTTTTTCCTTTCGAGAGAAACTCTTGCACTTCAGTCTTCTGCTTGACTTTATCTGAGAGCTTAAATTTTCCAAGCAGATGAATTAGGCATGGCAACCCGAAGACTTCTACCGGCATTATCTTTACTTTCGATCTCCTTACATCGAGTGCCTCCAAATCTTTCAATTTGGCAATATCCTTTGGAAGTTTGGAGATATTACCCCCAAGGCTCAGATATTTCAGAAGCACCAGATTGCATATTTCTTTGAGATGATCATCGTTCAAATCATCACATTTTTCAAGATCTAAAACTCGCAGCAATTGATACTTGCTGAAGTCTAATACAGTTGTACCTGCCTCCCCAAAGACTACCAGAGACCGTACAAGTGATAAATCAATACCGTTGAAGTTATCGCCATTCACAACAGTGTCACCATGGAGAGAAAGCCGACGAACATATTTGGGCAGGAACTTGTCATCACAGAAAAAGGTGACAAAGTTCTGAGAGATTGACATATGCGATATGAATTCACGCATCATACCGTACGTTTGGCATGTCTTGACTTTATCATTATTGCTTACATTGATGGGCTCAATAATGTTCCGGTCCATTAGCACATCGAAAGCAGCCGTGGAATCTAGGTTACTAGATGAAGACACTGGTTCTACAAATCCCTCGGCCAGCCATCGCCTCAACAGACTTTTCCTCCTGATTGGATGATCAGATGGGAACATACCAAAATATAGTAAGCAGGCCTTGAGAGCATGGCCAGGTAGACTAGTGTAGTTGCGGACCAGCACTCGCCGCATCCTTTCAAGTGTTTTATCATTCTCTAGGTGATAATGTAGCCGATTGCAGAGATCTTCACAGTTAGGCCCCGTTGGCCAGCCATTAGCTTGCAGGAATTCACCTATGGTAACAAGAGCAAGTGGCTGGCCATCACATTTCTTCAAAATTGCTGCTGAATCTGGCTGCTTGTAATGTGAATACCTCTCTGGGCAAGCTTTCTTGGACAACAATTGCTTTGAGCAGTTCTTATCAAGCCTGCTCATTTTGTGCAAATACCCATTCGCAGAACAGCAGGCATTAGCTACTGACTGGATGGTCGTCGTGACCACTATTCTGCTGCCAATATCCTTATCAGTCGGAAAAGCCGATTTGATGCTTTTCCACTGATCTTCTGTTTGAATGTCATCGATAACAATGAAGTACCTCTTCTTCTCCAACTGTTGTCTGATATCTACACACAGCTGGCCAGCATCGGAGTCCCCATGGCAAGCGGCGTCAATCCTGCGGAGCAATTCGCCGAGCACCTCCCGTGCACTCCGGTGCGCGGCGCAAACCCACGCGTGCCTCTCGAATCTCCCGCCGCGGGTCTCTCGGTTGTACGCCTCCGCGGCGAGGGCGGTCTTCCCCAGCCCGCAGAACCCGACGATGGCGATCACCTTGAGCTGCTCCGGCTGCCGCTCCGCCAGCTGCTCAAGGAGCTCCGCCCGGTCCGCGTCGACGCCGACCAGGTCCGCCTCGTGGATGCGCGGATCTGAGGCAGATGAGCACGACGGCCACGGCTCATCCACCTGCGCCGCAGCCGATGAGTAGACCTGACCGTGTTGACCGGGCGCCGCCGCCGTGTACCTCTGCTTCCGCTGGTTCGCCTCCTCCACCATCCTCTTCAGCCGCTGCAACTCCTGGGCCAGATGCTGGTTTGTCTGTAGCAACTTCTTGGTTGCCCGGACCGTGCGGGGGAGAAGCGACGAAGAGCGCCGCTGCTCCCTGGCGGCGCGGTACAGGACGCCGTCGATGCAGTCCTCGATGCCGTGGGCGAGCTCGCGGAGGTCCTCCATGCATAGCGTCTGTACGGCGGCGGCGGCGGCGGCGGCGCCATGTTCGACGGAGAGGTCGTCGTCGATGGCGCCGACGATCATGCGGAGCTCCTTGATGAGGAAATCGATGTCGCCCTTGACGCCCTTGTGCAGATTGAGCTTGTCGTTGACGAGGGAGAAGAGCCTCGGCAGGATGGCCTTGATGAATCCGCTCAGAAGCGCGGCCTCCATCTTCCACCTTCAACAAGCTACGATTCGATGGAGAGCTGGGGAAGGGGAAGACTGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0091300.1 | 11 | 6539038 | A | C |
| Osa11LNT0091300.1 | 11 | 6540706 | T | A |
| Osa11LNT0091300.1 | 11 | 6545387 | A | G |
| Osa11LNT0091300.1 | 11 | 6539429 | T | C |
| Osa11LNT0091300.1 | 11 | 6540065 | A | G |
| Osa11LNT0091300.1 | 11 | 6540109 | T | C |
| Osa11LNT0091300.1 | 11 | 6540123 | T | A |
| Osa11LNT0091300.1 | 11 | 6540957 | T | G |
| Osa11LNT0091300.1 | 11 | 6541165 | T | C |
| Osa11LNT0091300.1 | 11 | 6541464 | A | G |
| Osa11LNT0091300.1 | 11 | 6541624 | G | A |
| Osa11LNT0091300.1 | 11 | 6541625 | C | T |
| Osa11LNT0091300.1 | 11 | 6541923 | C | A |
| Osa11LNT0091300.1 | 11 | 6541970 | A | G |
| Osa11LNT0091300.1 | 11 | 6542178 | A | G |
| Osa11LNT0091300.1 | 11 | 6542202 | A | G |
| Osa11LNT0091300.1 | 11 | 6542358 | A | T |
| Osa11LNT0091300.1 | 11 | 6542506 | T | C |
| Osa11LNT0091300.1 | 11 | 6542521 | T | G |
| Osa11LNT0091300.1 | 11 | 6542629 | A | G |
| Osa11LNT0091300.1 | 11 | 6542726 | G | T |
| Osa11LNT0091300.1 | 11 | 6544443 | G | A |
| Osa11LNT0091300.1 | 11 | 6544449 | G | T |
| Osa11LNT0091300.1 | 11 | 6544509 | G | A |
| Osa11LNT0091300.1 | 11 | 6544805 | A | G |
| Osa11LNT0091300.1 | 11 | 6545380 | G | A |
| Osa11LNT0091300.1 | 11 | 6545463 | C | G |
| Osa11LNT0091300.1 | 11 | 6545576 | G | C |
| Osa11LNT0091300.1 | 11 | 6545639 | T | C |
| Osa11LNT0091300.1 | 11 | 6545641 | T | C |
| Osa11LNT0091300.1 | 11 | 6545697 | T | C |
| Osa11LNT0091300.1 | 11 | 6540075 | T | C |
| Osa11LNT0091300.1 | 11 | 6540176 | T | G |
| Osa11LNT0091300.1 | 11 | 6543083 | G | C |
| Osa11LNT0091300.1 | 11 | 6543325 | A | G |
| Osa11LNT0091300.1 | 11 | 6543705 | A | G |
| Osa11LNT0091300.1 | 11 | 6543786 | G | A |
| Osa11LNT0091300.1 | 11 | 6543974 | A | G |
| Osa11LNT0091300.1 | 11 | 6544171 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0091300.1 | osa-miR5542 | Translation | 4.5 | 21.99 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR156a | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156b-5p | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156c-5p | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156d | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156e | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156f-5p | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156g-5p | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156h-5p | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156i | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR156j-5p | Cleavage | 5.0 | 11.826 | 1 | 20 |
| Osa11LNT0091300.1 | osa-miR395b | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395d | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395e | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395g | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395h | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395i | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395j | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395k | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395l | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395s | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395c | Cleavage | 4.5 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395f | Cleavage | 4.5 | 24.242 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR399h | Cleavage | 5.0 | 16.526 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR399k | Cleavage | 5.0 | 16.526 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR156l-5p | Cleavage | 5.0 | 11.826 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR319a-3p | Translation | 5.0 | 13.586 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR319a-3p | Translation | 4.5 | 12.197 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR166i-5p | Cleavage | 4.5 | 17.489 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR396e-5p | Cleavage | 4.0 | 18.427 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395m | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395n | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395o | Cleavage | 4.5 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395o | Cleavage | 5.0 | 24.242 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395p | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395q | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395v | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395r | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR1431 | Translation | 5.0 | 22.87 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR1860-5p | Cleavage | 5.0 | 21.913 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR1864 | Translation | 4.5 | 24.946 | 1 | 24 |
| Osa11LNT0091300.1 | osa-miR396g | Cleavage | 4.0 | 18.427 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR396h | Cleavage | 4.0 | 18.427 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR396d | Cleavage | 4.0 | 18.427 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR395y | Cleavage | 5.0 | 16.641 | 1 | 21 |
| Osa11LNT0091300.1 | osa-miR5518 | Cleavage | 5.0 | 22.741 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0091300.1 | 11 | Tid1 | Morphological trait | Dwarf | nan | nan |
| Osa11LNT0091300.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0091300.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0091300.1 | 11 | fer11 | Resistance or Tolerance | Cold tolerance | RM3701 | RM552 |
| Osa11LNT0091300.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)