>Osa11LNT0095700.1

GTGTTTGAAACAAATTCAATATACCATGTCCGGTGCCAGATCAATTCTCACCGTTATTATTGACATGTGTAGAAACAAAAAAAAAGTTTATAACAAGCAAAGACATAGATTGTCTAAAAGTTCTCTAATGTTTCCATGCTGCGGTATAGTACGTAGTATATACCACCTAATATCCAGATCCTGTGCTACTAAAAAATTACCGTCAGTCTTAGGTAGCACAAATTTGAACTATCATTCTCTAAGAGCCAACTGCGTATTTCATGATATTTTGCAATTTCTCTAGCATCCCTTCTCTAAGTAAGTCTGCTATGATAAAAAATAGAAAGATGAGGTAATCAACATTGCACAACTTGAGGAGCACCAACCCCCTGCTTCTTAGGCTATTCCACATGGCATTCAGGTAATCAGCATTTGTACCCAATCCTTTTTTTTTTCAAATTTGTATTCTTCATAGTTGCAAAGTAGATGGTCCTTGTGAGTACCTCTATAAATGATGAAACATCAAAAGACTTGGCCATTTGCTTTGTTGTTACCATCATCCATCCTAAGCCATTGATTTTAGTACCATCGATGGGGTGAAATTGTTTAGCAATCACATATGCTTCTCTCTTTCCTATGTTTCATGTTGCAGAGTCATAATCACATTGGAAATTAATATGTTGATGGCGTAGTCCCTGCTTGACACCATTGGTCATGCCAAAAACCCTGAAAATGTAGAAGCAAATGGTATGAAAGGAAAATATATTCCTAACAGGTAGTAAAAGAGCTGTGCACAAAGAGCAACAGCTTGAATCTTTCTAAAGTGCATCATCTAGCATAACCATGCATTGATCGATGGCATAAGTCAAAATATTCATTTCACAAACAGAAACATATATCAGTTTCTCTTCTTCCACGTCTCCATCCAAAGCATCATCTGTAGCATCCCCATGACATCACTCATCATCTCCATCTCTAAATTTTGGTGCTCAAAGTCCATCATAATCGAATTAATGCATAGCTTGTGTTGAAATTAAATAAGTCAGGGATTTCAGCCCATTGCATCGCATATCTAGCAGCTACAGCATCTTAAGTAAAAGATTGATCCCAACCTGACCATGTTGCTACTACTGCTTAGTACAACTTAATGAAGTCAAAATCATGTACTGACGGCAAAAAACTTAGACTTTCACGTTTTTCCTTATAATGCACAGTAGATTCATAGACCATGTAAAACACATCGCTTGGTCAGCATGGAAGACACTGCTAGTTGACGAGGCATGCACACATTGTATAAATAGCAATAATTAGCATTTAGCAAGAAAGCGGCAGAACAAATGCACAGTTATCTCAACACTCTTAGAAAAGCTCCTTGAAGCTGAGATTTAAGTTGGTAGATCTTTGTGGTATGATGTTGTGTACAAATAAGATCTTTGGCTATCATTTTCACAGCTACCTGAGTGCGTCATGAGAAAAACCGGCATATCGTTGTTGAAATTGCATGGAACACAAGAAACTACAAATAATGGGCTCTAATTTGTCTCCACGGTTTTGGATGATGTCAACAACCAACTTGTGGGATGCTCCCTGAGAGATGAAAAGAAGTGAATTAGCATTAGCTGGACAAAAACAAGTAAATTAGCATTACCTCAAACCATAAGCTTGTAACCAAAATCTCTATCGCATTTGCTTCTTAATATTCCAGCGCACTTAAATTAGAGATGTCAAAACGCAGTCCTTCCCCTATCATTATAAAGACTTGCGGTGTAGATATGCAATTATTCTTGTATATTGTCCAGTCCATTGAAGTAAACCCATGTGGAATGGAGGACGAAGACACCGACAGGGCAAGATATTGCTAGACGCGAGTGATTCCCCTGCACAAGAGAGGACCAGCGTCCAGGGAGGACCGGCGCCCTGGAAGCATCGGAGCTGCTTGATATGGGCAGACTCTACCCCTTAACTGTCGCGGCCACAAGAGGCGTGGCAGGGAGCCAGTGGAAGGCAGGATCACAAGGACGTGACGGGGCGACTGCGCCGGTGGAAAGGAAGCTCCACCAGGACGTTGATTGATGCGGAAGAACTTATGGCAGCGCGAGCGAACAAGAAGGCCCCCGGGGGCGGGAGGATGGGGAGGGGGGGCAGCGATGGGAGGAGGCGGACGGCGATGCAGAAGGGACCGAAGTCGGCTCCGGTGGCGGATCCGAGTGGGAGAAGCACGATCTGGCCGCGTCTCCGGCGAGGACGCGGCGTAGCGCCGGCAGCGGGGCGTGGCGGTGGGGAAGAAGGAGGACGGCCGCGGCGTAGCGGTGGCAGCGGGGAGTAGGAGGAGCGAGCGAGGAGGACGGCCACGGTGGCTCCGGCGAGGACGCGGAGGAGCGGCGGCAGCGGGGAGTCGCTCCTGCGAGGACGCGGGGAGGAGTGAACGAGGAAGAGAAGCGCGCGGTCTCCGCGGCCGCGGGT

Explanation	CPC Score
noncoding	-1.35454

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0095700.1	11	11714790	G	A
Osa11LNT0095700.1	11	11714999	G	A
Osa11LNT0095700.1	11	11716215	T	C
Osa11LNT0095700.1	11	11715957	A	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0095700.1	osa-miR5817	Cleavage	3.5	5.554	1	24
Osa11LNT0095700.1	osa-miR6251	Translation	5.0	19.591	1	21
Osa11LNT0095700.1	osa-miR156j-3p	Cleavage	3.0	23.718	1	22
Osa11LNT0095700.1	osa-miR156j-3p	Cleavage	5.0	22.911	1	22
Osa11LNT0095700.1	osa-miR444d.3	Cleavage	5.0	12.439	1	21
Osa11LNT0095700.1	osa-miR2093-5p	Translation	3.5	8.553	1	20
Osa11LNT0095700.1	osa-miR2866	Cleavage	4.5	17.881	1	20
Osa11LNT0095700.1	osa-miR2905	Cleavage	3.5	16.467	1	21
Osa11LNT0095700.1	osa-miR5072	Translation	4.5	23.402	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0095700.1	11	nan	Morphological trait	Seed	RM332	RM229
Osa11LNT0095700.1	11	elr11-1	Physiological trait	Eating quality	RM1812	RM209
Osa11LNT0095700.1	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus