>Osa11LNT0096300.1

GTAAGTATGCCACACTGAGCCCGCGATAATATATATACTTCTTTCGATATTTATACAATGTTTATCGTACCAGAAGCGACGGTGCCGAAGCACCAATACCATGTTTTTGACCACCTCTAGTACTAACCTATTTTCTAATATCAATATTGTAGTACGTACACTTTAGACAAACACATATAGCATTACTCTTCATCTAACGGGTACTGTGTTAATTAGTTGAGCGGTGGTTGAACACCGTAACAAAGGGGAAGTCAGGTTCAGGTCTAATCATCAGTTCGGAATAATCTTGAAGCGAGGCTTGGAGAAGGCTGGAGATGGGTCATAGCGCCCGTAGTCGTTTGTCTTAACCATAAGGTTCCTTGGATGTACTTCGCCTGACGATGTCGCTCCCTCTCCGAGTGCAGCACTAGAATATTTCTGAATTATGACATGATAGTTAATCATACATTAATTCTTTTGCTATACCACATCTTTTGTTTTAGTGCGTCTCCGGAACTTTTTATAATTCAAAATTTAATTAATCAATGATGAACTCGTTTGAACATTCTTCTTCTTCGTGATTTGTTTATGGACAGCTAATTACTACTTTCGAATTCCATCTGTATATACCTTTTGATTCGTTTCTTGCGCTACCAGCTCCCTTCCTCCTGCAGTAAAAACTGAAAGCGCCGACGCTACGATGAGCAGTATAACGAAAACCGAAGCTCTATTAACTCTCCTGGAGCTCATCTTTCTACTTAATTTCTTTCCCTCTCTAGTCCTTCTAGTTCCTGATGATCAACAGGCTGCCACTCTCATCAACTCTGCCGACAAGGCACTGAACTTGCGCC

Explanation	CPC Score
noncoding	-1.04256

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0096300.1	osa-miR5818	Cleavage	4.5	8.406	1	21
Osa11LNT0096300.1	osa-miR159a.1	Translation	4.5	12.685	1	21
Osa11LNT0096300.1	osa-miR159b	Translation	4.5	12.685	1	21
Osa11LNT0096300.1	osa-miR827	Cleavage	4.0	9.122	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0096300.1	11	nan	Morphological trait	Seed	RM332	RM229
Osa11LNT0096300.1	11	elr11-1	Physiological trait	Eating quality	RM1812	RM209
Osa11LNT0096300.1	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus