© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0097200.1
GGTCTCGCCCTCCTCGCGATCGACTCCCCTCGCCCCGACTCACCGCCGGTCTCCTCCCCTCCGCCACAGATTCCTCCCTCCCTCCTCTTTGCAATTCCACCATCCTCTTTCCAGAGGGGCTCTCACCCTTGCTCCCTCCCCTAACCCTAATCTCGCCCGCGCCCCCACCAGCTTCTACCGCTGACCGTCGCGCCGTGCCGCCCCGCCTCGCCCTCTTCAACCGCCGACCGTCCCGTCGCCCTGCATCTTGCCCGCGCCGCCGCCGTCGTGTTATCCCGCCACCGAATTAGCATGGATCAGGCAAAAGGGTTGACGTGCTCCAGTGTAAGAATTGCTTGAGACTCGGTTGTCAAGAGCGCTGCTTTGACGACTTCCTCCTCGGCCTCCGCCTCAACTGCCACCGCCGCCACTGCCGCGTCGTCCGACAATATTTGGTTCATGGTAGCACATGGGTTTGGTAAATCTATCCCAATGAAAAATGGTGGTATTTGATCATTCCCTTCGTTCCTTTTCTATAGCTTTGGTTAACCTTCTGGGTGAGGTGCACTACAATTCCTTGTATGACATTGAAGGTGAGTTCTTTTGCTTTTCTGTGATCTGGGAGTGAAGGAAAGGTTTCCTACAATTCCTCGGTTTTTCCAATTTGCATGATTTCTTGTATAGCTGCTCATCTTCCTGTAACCTGCAGTGAAGACTTATGTCCTTATCCCCCGGTCTTATAAATCCTGCAGAATTTGCACATTAGAGGTGACCTTTTAATGGATTTTCTATTTTAAATATAATTTGCAGCAGACCGTAGTTGTCTGAAAATCCTTAATTTTTCTCCTCTGTTTCTGTGAAACTGTAATTGAATTGCCTATATATGGAATGATAAATAGCTGATGATATGTTTTAGTCATCATTTTATTTTAAGTTCAGGCTAAACTAAATTCATGATCTATCTTTAGCTTTTCTATTGAATTTTCTAGCGCTTAAGCTAAAGAGTTAGTCACCAGTAACAAAATTTACTAATATCATGAAGACCAATGAATGTTTGGTGCGTGGTCGGAATCCACCAACCTTGAAACTCCCTGCCATCCATATGTAGCTTTTTGAGATTTCATATATAGCTTCATAATGTAGGATGTTGTGAAATAACTATATGACTTTCCATCAGAAGTTAGTACTTTTAGCTTGCTTTCATATTTGGTTTACTGTCTGCATACTCAAATACACCTGAAACTAAAATGCATGTTTTCTTTTGCACATCAGTGCAATGTTGTTTCCCTTGAGGTGATGATGATATGACCATGGGAACACTTTACTTCACAGCAGTTGGTGGCTGTCCATCCATGGCAAATATTCTAGGAATAGATCATGTCTATTCAGATGCAACATTATTTGATCTGCCTTCAAAACCTGAAAAGATTGCGATAGTAGGAAGAGGGTATATTAGTTGGAGTTCGCTGGCATTTACACCGGCTCAATAAGTGATGTTCGTTTTCAAACTGCATTGCCTGACCAAAAATATTATCAGTGGGAACTAGGTTGTTCTCAGGTTTTTAATGGTTGTCACATGGATAGTTCTTTCTACTACTTTCGCTATGTAGGTGTACATCTGTGGGAGTAATATATGTTCCATGTGTCTCTGCATCAACTAAAATACCTGATGGATGTACACATTTTTAAACAAGTTGAGATTGATCTGAGTGGATGGAGTTATAAGTATTAGAAAAAAAAAGGATGGTTCGAACGGAACACAACAACCGTGGTTGATTAAACTGACAAAATAGCATTTGAATTGATATCATTAGTCTTTTTCCTCCCCAAGAGAGAAAACAACACAAAAGATCATTAGCCTTTCTAGCTCTGCTTTAGATGCAACTAAGCTCAGCACTTGCGTAGAATCAAAGTTCTCTGAAACAAGGGATACATCTGAATGTCTCATCTAAATCATCTGAACAAATGCATTTGATTTGGTATTCTTTGTCTGAATTAGTGAGTCATATTTGTGCTGCAGATGCACTGCCTTCCTGTAATTTATCTCCATTATCTTCATTTGCGGTTACTCTCTTTTGGTCGTCTGTCGGAAATTCAGAATGAAAGTTGAATGGTTGGGCACTTTCGGTTAGACAAGTGTTGCCTGCTGTTTGGAAGTAAATCATCATCATCTGAGCCTGAGCTGCACTTCCCTGGCATTTCTTGTCCGGGACAACTGTGACACTATTTTTCTTAAATTGTCAATCATGACTTTGCACAAATTTCATGATTTTTCACCCATCATCATAGTGCATTGTCAATTTTGTTGTCCTTCCATGAAAAGGATTTGGAATTGAATTCCTTGTTTGTATCGTATTAAACGACAACTTGGTTTCTGATAGCAATGCAGTGAAAATAAGTAGTATAATGCAACAATTTTGTCTGTATGTGTTAGCAAAATCCAAGTCAGCCTTTACCATGAAATATGAATCACAAGTCAAGCATATGTGCTTAATCACCCGTTTTAGCACCTGCATGATATGAATCATCTGGAGTTATCCCTGGGTAGAAAACGTGCAGGCTTATCATATTGTTCGGCGAGTTGTTGATGGAAGCTTTTTCAAAGTTGGTCCCTTGACTCTACATGTCTGTAAATGAGTTTTATACCAGGGGACCGGGAGCACATTTCTTACCATTTCCTTCATGGTTTACTCCCTTTGCCATGGATATCTTATGATTTTCACGAAACATAAAAGCACCTCATGTTAGGAATCCTCCCCATTTCAGCAGCAAATGCATTGCTTCAAAACAATGAATCCAGTTCCATTTTATTTTTTTAATAGCAAATCCCTGATCATACATTTTGCATCTTTAGTGTATCGTAGATCAGTTGATAACTACGGATCATTCATACATGATTCTGGCCGCTCCATAATTTGCTTATAATTTTATTCTCAAATCAAATGTAAAGATGTTCATAATTACTGCATAATTTCTTCTGCATGATTCTTTGTTCCTGCAAATGTTGTTCTTCTCCTCCCTCTACTTGGCCTCAGATCAAATGATTTGAGGGGCAGAAAACGAAACATGATGGTATTCAGTATCAAAGCTAAGTTTTTTTTTATTCTTTTGCAGTCATAAAATTTGATGGAATACCAATGCCTGTTGCGGGGTAATTTGCCCTCAATCTGAGGTATTGCCATGAGTATTATCATTTTCTCCCTGTAAATTGCAACAAGGTGTTTTATTAAATGGCTGCTTCGTTATAACATGGTGTTCTGTTCATGTGAACTTGTGAAATGGCTGAGAAGTTCTTTTTAGCTAAAGTGCAGTAGTTGTGCTATGTTGTGAAGAGTGAAATGAAGTATTAGCAAAAGGGTGAGACATGGGTTAAAGTTCCAGTGATATGAAATCGTTCATCCCTGTCTTGATTCCTGGAAGATGATATTTTTTTCCAAGTAGCTTTGATGAAATGTAGCAATGAGTAAATGACCAAAATTGTAATAATCTTTGTATGGATTTGAACACCATCGATATGATTTTTTAAATGAACTTCTTGTGTTATAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0097200.1 | 11 | 13753822 | G | T |
| Osa11LNT0097200.1 | 11 | 13754429 | A | G |
| Osa11LNT0097200.1 | 11 | 13754673 | C | T |
| Osa11LNT0097200.1 | 11 | 13755486 | A | T |
| Osa11LNT0097200.1 | 11 | 13755923 | G | T |
| Osa11LNT0097200.1 | 11 | 13756245 | C | T |
| Osa11LNT0097200.1 | 11 | 13756498 | T | G |
| Osa11LNT0097200.1 | 11 | 13757226 | T | G |
| Osa11LNT0097200.1 | 11 | 13753306 | T | C |
| Osa11LNT0097200.1 | 11 | 13754359 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0097200.1 | osa-miR812p | Cleavage | 4.5 | 11.611 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR5792 | Cleavage | 5.0 | 19.792 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR5818 | Cleavage | 5.0 | 22.577 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR5821 | Cleavage | 4.5 | 12.069 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR5821 | Translation | 4.5 | 12.961 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR5821 | Cleavage | 5.0 | 18.683 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR5830 | Translation | 4.5 | 18.511 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR5830 | Cleavage | 5.0 | 9.777 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR2873c | Cleavage | 4.0 | 18.357 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR6248 | Translation | 3.0 | 8.824 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR6248 | Cleavage | 5.0 | 7.694 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR396a-3p | Cleavage | 5.0 | 17.05 | 1 | 20 |
| Osa11LNT0097200.1 | osa-miR396b-3p | Cleavage | 5.0 | 17.05 | 1 | 20 |
| Osa11LNT0097200.1 | osa-miR399d | Cleavage | 4.5 | 11.776 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR399j | Cleavage | 4.5 | 11.776 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR172d-5p | Translation | 4.5 | 16.06 | 1 | 20 |
| Osa11LNT0097200.1 | osa-miR435 | Cleavage | 4.5 | 16.688 | 1 | 20 |
| Osa11LNT0097200.1 | osa-miR528-5p | Cleavage | 5.0 | 15.728 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR530-3p | Cleavage | 4.0 | 15.745 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR816 | Translation | 5.0 | 21.714 | 1 | 20 |
| Osa11LNT0097200.1 | osa-miR1437a | Cleavage | 4.5 | 13.216 | 1 | 22 |
| Osa11LNT0097200.1 | osa-miR1440a | Cleavage | 5.0 | 22.006 | 1 | 20 |
| Osa11LNT0097200.1 | osa-miR1866-5p | Translation | 4.0 | 9.651 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR1875 | Translation | 5.0 | 15.801 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR1875 | Translation | 5.0 | 18.926 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR2090 | Cleavage | 5.0 | 17.132 | 1 | 22 |
| Osa11LNT0097200.1 | osa-miR2099-3p | Translation | 4.5 | 15.786 | 1 | 20 |
| Osa11LNT0097200.1 | osa-miR2104 | Cleavage | 4.5 | 12.789 | 1 | 22 |
| Osa11LNT0097200.1 | osa-miR2875 | Translation | 3.0 | 20.009 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR2932 | Translation | 4.5 | 18.67 | 1 | 19 |
| Osa11LNT0097200.1 | osa-miR3981-5p | Translation | 5.0 | 21.993 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR5082 | Cleavage | 4.0 | 19.792 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR5151 | Translation | 4.0 | 10.648 | 1 | 22 |
| Osa11LNT0097200.1 | osa-miR5153 | Translation | 4.5 | 15.38 | 1 | 24 |
| Osa11LNT0097200.1 | osa-miR5519 | Translation | 4.0 | 21.754 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR1428a-5p | Translation | 4.0 | 21.761 | 1 | 21 |
| Osa11LNT0097200.1 | osa-miR5488 | Cleavage | 5.0 | 11.577 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0097200.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0097200.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0097200.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)