© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0008200.1
TAACAGCAGCGAACTTGCTTGATTTTTACACTGATCAAACTTATAAATATTCATACAAATCACATTCCATTCTTGTGTAAAGATCAATGCACATTAGACCCAATAGTTGCACATCTGTCACACGACATTTTTTTTCATAGGATCAAGAACATGAATTCTGCACATAAACAGGCTTTTTCCTTTAGCCTTGTGAAGAGGGATGCTGCCGCGAGTATTGGTTCACCAGCAACAGTATACATCACTGATCAATCTACTAGGTTGCCTCTGCAGAGAGTATCTCGAGCTCAGCCCACCAGAGAGGCGAGAGCCGCGGCGTCGCTGCCTCCGGCGAGATGTTGAGAGCTTGTCTCAGCTTGCGGGTGGCGTCTCTCATCGTCGGCCTCTGATCTGAGTCGGGATCAATGCACTCCTGAATCACCTCGCAGACGGCCTCCAGCTCGTTGGCGTTGTGTTCCTTCAGCGACGCGTCGACGAGCTTGCTGTAGCTCTTGCCCTTCAGATACTCAGCGGCCCAGTTGCACATGGATTTTTGGTCGTCTGCTTCAGGGAGCTTTCCGGATATGATCTCTATCAGAAGCGTGCCAAAGCAGTAGACGTTGCTCGCGATATCAGGAGGACATTCAGAACGGCTGCTGCTATCCTCCTTTGCAGTCTTTGCTTTTATGGCGACTTCTTTCCAGATACCAACATCAGCAATCTTGGCAGCATAATCATCTGTCATGAAAATTGTGTCGGAGCGCATGTCGGTTATCGCAACAGGTGGATTGAGATCATGGTGCATGTATTGGAGACAGTATGCCACACCCATGATGATCCTCATCCTTGCAGCCCAGTCCAGATGCTCAAATTCTTTGAGGTGGAGATGCTCAGAGAGAGTGCCATTTGGAGCATACTCGAACACCATCATTCTCATGAAGGGTTGATTTTCCAGGCAATAACCTAGGAGGTTGATGAAATTCTTGTGGTTTACTCTTGATAGTGTGTCTATCTGTTTTCTGAAGCATGTCTCTGAACTCTTAGGCCACTCTTTGAGCGACAAAATGGCAGTGGAAACAACACTGATCTCAACTCCGCTAGATAATGTCCCTTTGAACACGGTGCAGCTAGGGAAAGTGTTGATTATGTTACTGAAATCCTCACAAGCGGCTTCGAGTTCAGGTCTGTTTAGCTTTGGAACACCTGTTACAAATGCTTTCTGAAGTGGGCCACTTAGACCCGTTTTCCAAGGTCCTATTGCCGCACGCCCTCGCTTCCGCCAGACCAAGATTGGAGCCACAATCAGGCTAATCAGCAATATTGCAGCTGGAATTATCATAAAATATGCCCACTTGCTGTGCTTTGAACCAGACACTTCATCGGTTGATTGATTTGCTGCTCCAGACTGCATTGCAGCAGCATCAGTATTTACAGCTGATTCCAGAACTTCGGCCTCTGAATTTGGGAATGCAGAGAATGAACCACTCCCTAAAGAGAGAACATCAATAGCCCTTTGGATCTCTTCTGAATTTACAGGGCCAGAAGATTTAGCATAATTCCCTGAAAGGGCAGGCAGATTGCCAACTTCACCGAGCAGCCTGCGGCCCACGGCACTTGCAAAGGACTGCAAATTTTGCATAATGTGTGGCTCGCCTAGACTTGCTAGGTTGGTGGAGTATTTCTCTCGGAGATCACTGAAAGAAGTCCAATCCTTAAACCCCGCCCAGCAACCTAATTTTCTGCTCAAGCATCCTGCCTGCTCATCAGATATATCTTGAATGTGCAAAGAAGAGATATCATCTTGGAACTGATTGTCATGAAGTGACAGCTGCTTGAGCAGTGGCATTGCCATTAATTCTTCTGGAATCGTTCCATCCAAGTTGTTGCTGCTCAAATCCAGTACTTCAAGGGCAGTTAACCCTCCGAACTCTTTGGGAATTTTCCCACGGAAATTGTTGTTTCGAAGAATGAGAGATTTCAAAAGTTGAAGACGTCCAATCTCAGGTGCGAGAGTTCCCACCAATTCTCGGCCTGTTAAGTTCAAAATCTCAACTTTACCGTCAAAGCAATGCACGCCGGACCATCTGCAGGGCGTGGCGTCTGCCGGATCCCAATCCCGCAAGGCGCCATGGGGGTCAGCCTCCACCCTCTCCCTCAGCTCGAGCAACGCCATTCCTTCGCCGTTGAGCGTGGCGCCGCCGCGCCCCGCCTGCGCCTGGAGCAGCACGAGGAAGACGAAGAGCAGGTGACGCAGCGCGTCGCGGAGGTGGGGCCCGACGGTGGCGCGGCGAGGCCCCCACCGCGCACCCATGGCGACGGGGGAGGAGCGCCTCCCGGACAATGGCAGCCCGGCGGCCACCCGCCGCTGCCGCCGCCCTCTTCCGGCCGAGAATGTGGGGGAGGGAATCAAGAACCAGACGAAGCTTAGCGAAACAACCGCGGCGAGCAGAGGCGCTGGCTCCGGTCGATCTCTTCCTCTCCGGCCTCGTCACGACGCCGGGAAAACAAGATCACAAGAGGACGACGACGACGACGACGACGACGACGACACGACGCCGCGGGCGCTGGCTTAGCCCGGCAAAGCCCCGAGGGAGGCCGAGCTATCCGCCGGAGGATCCCATGGGTCGCCTCGCCCGCGCCGGGACGGTGTCTCAGCGGCGGCGTCGGCGAAGAGCTGGTGCTGTCAGCGGCGGAGATGGACGTGGACGGGTTCTCGTCGGGATCGGGTGGTCGGACGACGACGAGGGCGGCGGCGCGAAGGGGGTGGTGGGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0008200.1 | 1 | 5818287 | G | T |
| Osa01LNT0008200.1 | 1 | 5814924 | G | A |
| Osa01LNT0008200.1 | 1 | 5815218 | T | G |
| Osa01LNT0008200.1 | 1 | 5817344 | A | G |
| Osa01LNT0008200.1 | 1 | 5817441 | T | C |
| Osa01LNT0008200.1 | 1 | 5817442 | A | G |
| Osa01LNT0008200.1 | 1 | 5819113 | T | C |
| Osa01LNT0008200.1 | 1 | 5818018 | T | C |
| Osa01LNT0008200.1 | 1 | 5816960 | G | A |
| Osa01LNT0008200.1 | 1 | 5817021 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0008200.1 | osa-miR5539a | Cleavage | 5.0 | 16.453 | 1 | 22 |
| Osa01LNT0008200.1 | osa-miR5539b | Cleavage | 5.0 | 16.453 | 1 | 22 |
| Osa01LNT0008200.1 | osa-miR172a | Cleavage | 4.5 | 22.08 | 1 | 21 |
| Osa01LNT0008200.1 | osa-miR172b | Cleavage | 4.5 | 22.08 | 1 | 21 |
| Osa01LNT0008200.1 | osa-miR172c | Cleavage | 3.5 | 22.08 | 1 | 21 |
| Osa01LNT0008200.1 | osa-miR172d-3p | Cleavage | 4.5 | 22.08 | 1 | 21 |
| Osa01LNT0008200.1 | osa-miR5489 | Translation | 5.0 | 18.284 | 1 | 21 |
| Osa01LNT0008200.1 | osa-miR5509 | Cleavage | 5.0 | 21.775 | 1 | 21 |
| Osa01LNT0008200.1 | osa-miR5519 | Translation | 5.0 | 19.934 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0008200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0008200.1 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0008200.1 | 1 | ph1.1 | Morphological trait | Dwarf | RM220 | RM272 |
| Osa01LNT0008200.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0008200.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0008200.1 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008200.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008200.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008200.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0008200.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0008200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0008200.1 | 1 | qHUS-1-1 | Others | Others | RM151 | RM3746 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)