© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0100800.1
CAACATTTAAAAATAATTCAATAATAAGCTAAATTTTGTTTTCGTCGGAATATATCCACGTGTGATCTTGTTTCGAATATTTAATTACAACGAATTTAATGGTGCAATCGGATCATTATTTGGATAAGTAATTTAAGAGAAAAATCAGTTTAAAATAGTTTTGCACGTAAATCAGGCGCCGATTTTAACCTCCTCCCATCGGGCGCCCGAGCCGGAGTCACATCCGGATATATATCAAAATATGGCATTGTTGCCCTGGTGAGGGCTCCTTGACAGGCTACACTCATCTGCAGGGCGATCTTCACTTTTTAGCTGCTAACGGCGAGATTCTATTGATGGAAGAAACGAGGAAAAAACCTCTTGCAAGGGTCGTCTAACAATGTCATAGTAGTGGTGCTCATAGTATCTTCTCACGATTTTCAGTCCACCTTTCACATGCTTCAACAACCACCTCTTCGAAAGTATCTTGCCAAGAGTTACCCTTCCGCGTGAAGATTAACCAACAATCAATGATTCCTCTGATCATGTAATGCTTAGGAAGGGAATGCCCAGAAAAAACTCTCTCATTGAATTCATCTACAAGATCTGAAAAGCATTTCTTGTCCCAGTTAATAGAATCATCATTCGTGTCGAAAAAACCTTCCGTTTTGTGATCATTCATCAACCTTTTGATATAATCCTTTAGCGACTCATCCTCCAAGAGGTGTCGTAAACATTCTGAATATATGCAAATTTGTTGCTGATTTTCCAGAACATCAGCTCTCCTCTCCAAAGACAATTTCAAGAGAGCATGATTCAAATCTGAAAACTGTGCCATCGTGCTCTCGTCTCTAATGAGATCTTCTACAAATTCATCCTTTGAAGAAATAAACTCATCCATAGAATGATCCAGTTCACCAGAGGACAAATAATTGTCAAACTCTTTGTGCAAGCGTATTTGCTCTACAGCAGTATAATACATGGAATCTCTAAACTTAATTGTCAACAAATGCATACGCATAAGGCTGTAAGTGTGAAGGGAAATCACCAACAACTGGTACTAGTTGCTGACTGTGATCTACTTCGTTTGACTTGGTTAATCGACTAATTATTCCCAAAAGTATGTGTAAGTGGCTCTCACGTATCAAAGGATGAAATCTAGGCTCCCAAATATACAACACAGAATGAAGCAAAAGATCAACTGATGGTACCACTTCACAGTCTGAAATCTCAGTAAGTATCTCATGATTTTGTTTGAGATTTTCAATAACATCATAAGAACAATCAGAAACCTTAATGTAGGGTTTCAGTTTGACAAGTTCGCTAAGAAATTTACATATCTGCATGTTGCATCTGAAGCAAGTCCTTGTGTAAAATTGTCGTTGTCGGAGAGAAGAAATGGTCACCATATAAGGATGTTGATAGCTGTTGATGGCATGCTTATATCTGAATTCAAATTTCAATTTCTGGAAGAGAGTTTCTTTGTCCAAATAATCACGCTCCATACAATCATCCATTGCATTCACTTCTTGTAAGATGTCCATATAAACATGAAGGTACCTCTGAAATTCTTCTTCGAACTCCCAATTCCACTCACAACCCTCAGGAAGTTCCTTACTAGCAGAAGACGCCTTTAATTCAAGATCTTTCTTCAGCTTTTCAATCCAGACGCTAAAGCTGCATTCAGCGCTACAATTGTCTTTGCCTTCTCTAGAAAACTCCTGGATTTGAAAATAATTATACAATTGTTGACAAAGGACAACAAGGTCCTTGCCAGCACTATCAGCTGCACCTGGATTCAGTTTGTGTCTTTGGCACTGGATTGCACAAGTAAGCTGATTGTCTAGACGTCTAACTATAGATGGAAGCAAATCATCCACGATGAAGAGCCTGAGACTCATATCATCAGTTGTTGCAAGGTGAATGAGAGAACGTAAAAAAGGAATAGCCTTGCTTGTTGCTTCATCATCCACAAAGTACCCAAAGAGGCTCATATCCAGCCAGTCAAAACAATCACCAGTTAAAATAAACCTAAAGAGAGAGATTGATGACATAGATTCAGGATCTTGCAAATAGTTTTCTTCTGTTACTGCCAATACTCCAAGAAATTCTGAAACTTCACGAGTGAAATCAAGTAGTAATTTTTGCTGTAGCTTTTCTGTCTCACCAAATTCAGAAAGGAATGGTACTTCAGCTTTCCCTTTGTATAAATGATTGAACCAAGCAAAATTAAGTACAAATTTACACTGTCGTAACATGGGTTGTACAAACTTGATTGCCAATTTCTTGGAGAATTCAGGAGGGCAACACAAAACCAATGGAATAGCTACATAATGGATAAGGCTTTTTCAAATGCCTCACTTCCATAGACCCTAGATCTTTAGTGATAGTAGCACTGAGAGATAGACTACCCAATAACTCCGAAAATGATCCACCAATGGATGGACATAGACCTATGCCATCATATACTTTCTGTTGAATTCCCTCTAACAATGCTCTTGTCTTAGGTTCAACAGAACTCTCCACGATATTAATGTTAGACAATCCATCAGTGATTTTAAGTATATGAGCAAGCTTTGTAAGGCTCATATGTTTTTCTTTTTTAAGATCTTCGAATAAACCGTCAACAACTTGATTTTCCCGAAGCGAGTGTATATATTGAATCAGCTGCTGCTCTGAGAGCCCTGAATCTCCAGCGACAGGAGCCGCTGAGTCAGGCACAGCGGAGGGGAGGACAGTGTCCATGGCGGTGCGGGTAACTGCTTCCACCGCTCCCGTTCACCGCCGGCGCACCTACTCAAAGCTCCGGTCCTCCCGTGGCAGCGAAGGCGAGGAAGCCACAGGCGAGGGCCGGAGGGCCGCCCGTGGTAGCTAGGCGGCGCCGGCGTTTCCGCGGGGCGAGAGGGCGGCCGCCGCCCGTGGCACCTAGGCCGGGCGGCGCGTCGATTGCCGGGATCGGGGTTAGGGTTGGGGCAGCGGCGCCGGCGGCTTGGCTTCCCGACTTCAAGTTGCCTACGGGCTACACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0100800.1 | 11 | 18533988 | A | T |
| Osa11LNT0100800.1 | 11 | 18531657 | T | C |
| Osa11LNT0100800.1 | 11 | 18531744 | T | C |
| Osa11LNT0100800.1 | 11 | 18531754 | A | G |
| Osa11LNT0100800.1 | 11 | 18531799 | T | C |
| Osa11LNT0100800.1 | 11 | 18531829 | A | G |
| Osa11LNT0100800.1 | 11 | 18532219 | C | T |
| Osa11LNT0100800.1 | 11 | 18532498 | C | T |
| Osa11LNT0100800.1 | 11 | 18532770 | C | G |
| Osa11LNT0100800.1 | 11 | 18532876 | A | C |
| Osa11LNT0100800.1 | 11 | 18533004 | A | G |
| Osa11LNT0100800.1 | 11 | 18533317 | A | T |
| Osa11LNT0100800.1 | 11 | 18533632 | G | A |
| Osa11LNT0100800.1 | 11 | 18534303 | C | A |
| Osa11LNT0100800.1 | 11 | 18535338 | G | T |
| Osa11LNT0100800.1 | 11 | 18536361 | T | A |
| Osa11LNT0100800.1 | 11 | 18536594 | C | G |
| Osa11LNT0100800.1 | 11 | 18533344 | C | T |
| Osa11LNT0100800.1 | 11 | 18536904 | C | T |
| Osa11LNT0100800.1 | 11 | 18537115 | C | T |
| Osa11LNT0100800.1 | 11 | 18537781 | T | C |
| Osa11LNT0100800.1 | 11 | 18538033 | A | T |
| Osa11LNT0100800.1 | 11 | 18538079 | A | C |
| Osa11LNT0100800.1 | 11 | 18538383 | T | C |
| Osa11LNT0100800.1 | 11 | 18538723 | T | C |
| Osa11LNT0100800.1 | 11 | 18538831 | G | A |
| Osa11LNT0100800.1 | 11 | 18539883 | A | G |
| Osa11LNT0100800.1 | 11 | 18540755 | T | C |
| Osa11LNT0100800.1 | 11 | 18541396 | A | T |
| Osa11LNT0100800.1 | 11 | 18534132 | C | T |
| Osa11LNT0100800.1 | 11 | 18535706 | T | C |
| Osa11LNT0100800.1 | 11 | 18535739 | T | C |
| Osa11LNT0100800.1 | 11 | 18536033 | T | C |
| Osa11LNT0100800.1 | 11 | 18534753 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa11LNT0100800.1 | DTM_#DNAt_MULE_japo_Os0120 | Chr11 | - | 18535582 | 18536170 | 588 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0100800.1 | osa-miR5537 | Cleavage | 4.5 | 14.427 | 1 | 22 |
| Osa11LNT0100800.1 | osa-miR5542 | Cleavage | 4.5 | 12.835 | 1 | 21 |
| Osa11LNT0100800.1 | osa-miR5824 | Cleavage | 4.5 | 8.637 | 1 | 24 |
| Osa11LNT0100800.1 | osa-miR171f-5p | Cleavage | 5.0 | 13.261 | 1 | 21 |
| Osa11LNT0100800.1 | osa-miR171i-5p | Cleavage | 5.0 | 13.878 | 1 | 21 |
| Osa11LNT0100800.1 | osa-miR1870-3p | Translation | 5.0 | 16.52 | 1 | 24 |
| Osa11LNT0100800.1 | osa-miR2099-5p | Cleavage | 4.0 | 15.971 | 1 | 22 |
| Osa11LNT0100800.1 | osa-miR2867-3p | Cleavage | 5.0 | 21.13 | 1 | 20 |
| Osa11LNT0100800.1 | osa-miR2873a | Cleavage | 2.5 | 9.316 | 1 | 24 |
| Osa11LNT0100800.1 | osa-miR395x | Cleavage | 4.5 | 13.806 | 1 | 21 |
| Osa11LNT0100800.1 | osa-miR5494 | Cleavage | 5.0 | 15.258 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0100800.1 | 11 | gpl11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0100800.1 | 11 | gw11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0100800.1 | 11 | yld11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0100800.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0100800.1 | 11 | hbd3 | Physiological trait | Lethality | nan | nan |
| Osa11LNT0100800.1 | 11 | Hbd3 | Physiological trait | Lethality | nan | nan |
| Osa11LNT0100800.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0100800.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)