© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0102300.1
CAAACCCTTTATTTTTCATTGCAAATCATATTAGGCACTCGATACCCAACAATATAACTGTACACATGAAACCTGCAGATTCATGGGAGGGAAGCTTTCCAGTCCTAGCTTTATTTCTAAGTCCCTCACATGAACCTCAGCAGCATGACAAGCCAAAGAATCAATTGCGATGTTTATTCTGCTGTTCACACTTATTGCAAGCAATTGAATTGCGGGATAACCATTTATCTACGCATGGCACGCCACAAATCGTTTGTCGTTCTGCACATCTAGCACGAATGGCCGGTCGAGACCCTGTGCCATGTGTCCATGTAGAGCCAACCAGCTAGTTGATGGTTTAACAGCAGCTCACAGCGATAGGCTCAGTAGCTTTCCTCAGCCATTCCTTCTCCTGCTCGTTCAGGTATGGTTGCAGAATTTTTCGGCAATCTGCGTGATATGCGTTTACCCATTCAATCTCGGCCGGGGTCAGCAAAGTGGTGTCTATCAGTTTTGTCTGGTATGGAGCCCATGTTATATGTTCAAATGCCAAATAACCCTTATCTCCGAAATTATATTTAGTATTAGCCTCTTTAACTATCAGAACATTCTCCAATCTTATACCAAAGCTTCCATCTTCATAGTAACCAGGTTCGTCTGTTACAGTCATCGATGCTTGTAGTGGTATATTTCTAGCAGAAGGTCTGAAGCTAATTAGATGAGGACCTTCATGAACATTCAAATAAGACCCAATTCCATGGCCTGTGCCATGCCGATAGTCCAGACCGCTTCTCCAAAGTGGTGTTCGTGCGAGAATATCAAGAGCATGCCCTGTCGTTCCATTGGGAAATACAGCACTGTCTAGTGCAATATGGCCTTTCAAAACAGCTGTGTAGCATGACTTCTCATGCTCAGAGGGTTTCCCAAAATGTACAGTTCTTGTAATGTCTGTAGTACCATCAAGATACTGAGCCCCAGAGTCACAGAGATATATTTTATCAGCATCAAGTTCAGCACATGAACTTGCTTCAGGTGAATAGTGAATCACTGCTGCATTTGGTCCCACGGATGAAATCGTAGGGAAACTCAGACCTTTGAAGTGCTCTTTAGATGCACGGAAACCTTCAAGTTTATCACTCACAGAAACCTCAGTAAGTTTTACTTCCATATGCTGCTTTTTCTGTGATCCCTTGGCCTCACTAAAGTAACCAGAAGCTCCATAGTTCTCTTGCATCTGATTGTCAAGCCAAGCCAGGTATTGCACAACAGCAGCACCATCTCGAATATGTGCCTTCCTCAAACCATCCAGCTCCACGGGATTCTTCACAGCCTTTGGAAGAGCAATAGGTGATTGCAGCATCAGAACTTGATCTTGATCCAGTTTTGAGTACAGTGCAAGACAGCATGAATTTGAATCAATCCAAACTTTTGAATTCTCATTCATATCATTTTCCCCATACGAGCTACCATTAACTGCAGAACCTTTTAGCTGTCCAGATGCAAGCAAGCTTGCATCTGATTGAACCATATTATAGTCTTTGATATCGATACCATTATCAGTCATGTAGTTCTGGACCTCAACAGATACTTTTCTCTTATCCACATAAAAGAAAGCACTGTGCAAGGTTACAATAGAATAAGAATGGACCACTGGGCTGTAGTGCACATCATCTCCTCTAATATTGTACAACCAAGCAACCTCATCAAGTGCAGCAATTATAATGCCCCTAGCCTTTTCATGTAGAAATTTTTCTCTTAATTCCTTAAGTTTTTCGGTAACAGTACGGCCAGCATACTCTACAGGTTGCACAAATACAGGTAGAGCCTCGGCCGAAGGACGATCCTTCCATATTTCATCTATCAAGTCAGAAGAAAGCTGAAACAGTGTCTGGTGCTTCTTTGAAAATGCATGCTCGTATCTCTGGGCAGTGTCAACAGAGATGCACCATGGATTAATTCCAACAACAGCTTCATCTGACAGGTTATCAGCTATCCAAACTTCAACCGGGGGATCTTCTCCCATTCGCATCAATTTCCAGCGATCACTGAGTTGCTGCTCTGCCTGCAAGAAGTAACGCCCATCCGTCCACAATAGCGCCTCCTTCATAGTTATAAGCGCCAAACCGGCGCTCCCGGTGAACCCGGAGACGAACTGCCGCCGCTTGTCCCGCTCCGACACGTACTCGCTCTGGTGGGCGTCTTCGGAGGGGACGACGAGCGCGTGGAGCGGCGGGGAGTGCGCCGCCATGAGCGCGCGCAGCTCGTCCAGGAGAGCGTCTCTCGCCGCCGCCGCCATTGCGCTCCGCTTCCTCAGTTCCCTTCCACTCGCAACCTCTGCTCGCTTCCTCCTCCGCCTAATCGCTGGATTTTTTTTTCTCTCTTTTTTGGAAGTAGGTTGGCTTTTCTTGGGATTTGCTTCGCGATTCGTGCTCCGGCGACCTTAGCTCTTCTCCTCCAGCTCCGGCGACACCTTCTCCAACTCCGGCCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0102300.1 | 11 | 19711242 | A | G |
| Osa11LNT0102300.1 | 11 | 19711376 | A | C |
| Osa11LNT0102300.1 | 11 | 19711550 | T | C |
| Osa11LNT0102300.1 | 11 | 19709769 | A | T |
| Osa11LNT0102300.1 | 11 | 19710178 | G | C |
| Osa11LNT0102300.1 | 11 | 19711061 | C | G |
| Osa11LNT0102300.1 | 11 | 19711595 | T | C |
| Osa11LNT0102300.1 | 11 | 19712429 | T | C |
| Osa11LNT0102300.1 | 11 | 19712858 | A | T |
| Osa11LNT0102300.1 | 11 | 19712987 | C | G |
| Osa11LNT0102300.1 | 11 | 19713018 | T | A |
| Osa11LNT0102300.1 | 11 | 19713061 | C | A |
| Osa11LNT0102300.1 | 11 | 19713346 | A | G |
| Osa11LNT0102300.1 | 11 | 19713557 | C | T |
| Osa11LNT0102300.1 | 11 | 19714529 | A | C |
| Osa11LNT0102300.1 | 11 | 19714984 | A | C |
| Osa11LNT0102300.1 | 11 | 19715778 | A | T |
| Osa11LNT0102300.1 | 11 | 19716732 | C | T |
| Osa11LNT0102300.1 | 11 | 19717287 | G | C |
| Osa11LNT0102300.1 | 11 | 19717688 | T | C |
| Osa11LNT0102300.1 | 11 | 19717698 | T | A |
| Osa11LNT0102300.1 | 11 | 19717829 | T | A |
| Osa11LNT0102300.1 | 11 | 19717943 | A | G |
| Osa11LNT0102300.1 | 11 | 19718120 | A | G |
| Osa11LNT0102300.1 | 11 | 19718352 | C | T |
| Osa11LNT0102300.1 | 11 | 19718388 | G | T |
| Osa11LNT0102300.1 | 11 | 19716714 | G | A |
| Osa11LNT0102300.1 | 11 | 19714678 | C | G |
| Osa11LNT0102300.1 | 11 | 19715953 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0102300.1 | osa-miR5823 | Cleavage | 3.5 | 20.524 | 1 | 24 |
| Osa11LNT0102300.1 | osa-miR5337b | Cleavage | 3.5 | 24.047 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR6254 | Cleavage | 5.0 | 20.493 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR172a | Cleavage | 3.5 | 15.318 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR172b | Cleavage | 4.0 | 15.318 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR172c | Cleavage | 4.5 | 15.318 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR172d-3p | Cleavage | 3.5 | 15.318 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR815a | Cleavage | 4.0 | 24.353 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR815a | Translation | 5.0 | 13.074 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR815b | Cleavage | 4.0 | 24.353 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR815b | Translation | 5.0 | 13.074 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR815c | Cleavage | 4.0 | 24.353 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR815c | Translation | 5.0 | 13.074 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR2100-3p | Translation | 5.0 | 12.212 | 1 | 22 |
| Osa11LNT0102300.1 | osa-miR2864.2 | Cleavage | 5.0 | 21.295 | 1 | 21 |
| Osa11LNT0102300.1 | osa-miR3979-3p | Cleavage | 4.5 | 14.45 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0102300.1 | 11 | gpl11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0102300.1 | 11 | gw11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0102300.1 | 11 | yld11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0102300.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0102300.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0102300.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)