© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0102800.1
TATTTATAGAGATATTATTCATTATGTTATTAAAAACCCATCAGGTACCCACTAGGTTATCTATGTCCGTAAGGCATAGATATGGGTAGAGGTAGAACCCATTCGGTAGGTTCGGAGGTTCTGAACTGTTAACAAATCGTCAGCTTACACTTGAGATGAGATGGTAAAATGCCCAAGCCAATTACAACTTGCAGGTTGCCACAGGCTTGTGTAGTACAGTAAACATTGTTAGAGCTTTCTTCTTGCCCACGATCTGCAAACGATTTACCAGCAAGAGAGATGATGTTTTCAGGCATAGATAGACTGTTACAAAATACACATCGACTAAATAATAAGGCACTAATTTCCTTCATCTACTTCATCCCAAGCGCGAACGACAGCTTCGGGCGCGACTTGTTCTTGCCCAGCAGCTTCATCTGGCTCTGCTTCTGCTGCTCTTCCTCCATCTGCTTCCGCTTCATGGCTTCCTCCCTCTCTTTCTGGAGCCTCTCCAGCTCCTGGTACCGCTCCAGCTCTTTCTGCTGCTGCTCCATTGCTTCCTTCATCTGAGCCTCCTCGGCTTTCTTCCGCTCTTCCTCGAGCTTTTTCTCTAGCTCCTCCCGCTCTTTCCTTTCGCGTTCCGCTTTGTGCTGAGCTTCAACCAGGGCTGCCTCCTTTTCTTTCTCAATTTGGACTAATACCTCCTCATGTATCCTCTTTCGCCCTACCTCAATCCGTCTTTGTATTTCATGTTTGATTTCCTCAGAATTCAAACTCTCTTCAACTTGTTTCCTAATAGCTTGCTCAACTCTTTTTGCAGTTTCCTCCTCTAATAGTCTGAGCTCAACTTCTTTTTGGCGCCTGCAATTGAGACAAGTTAATGAAGTCTACTTTGGGAAAGAAAGAATTGCCTATGCCTGGCACCTTCTTCAAATCTTAATGGTAAACAAAAGCAGCCAAAAGAAAACCGCAGATTTACAATCTTTAACACTATCTATGATCAACTATGCCTTCATCAGCATAGTTCTGAATACAAGCTAATGCATTTCAGGCATACCTCTAGTACGATTCCAGATCCAAAAAATGAACTATCAAAACTGGTCAAGAGTAGATAAAGGATCACCAATTGCATCATCAAATATAACAAGTGGAACTATAGCAGTAGCTTCCTTCAGAAAAGCCTGTAGAGAAGAATGTCAAGTAACTTGTGGCAGGTTTAGAGCTAATCATGTAGACATTTCAGTATTCCAATTAGATCATATTTTCACATCTTCAATCTAGTCAAAACAAACTTCAAAGCAATTATGCAATAGTGTATCGTTACAACTTGGTGAAAGCATGGCAATATTAAACGCATTTTTATGACAGGTATATCACATGCCACATGTGATGACATAACTGGAATGATGACAAATTACAGCCCCACATTGGACCATACTACGTCTATGAAAGCATCAACCAAAGTAAACTTTGAAAAACCACCATGGAAATTTAACTCCATGCCTTTTAAGAATGCAACCTAATGGATTGAACAAACGGATTCAGATTTGCCAACCAGCAGAGAGGTCCATAGTGAAGAATATACTGTTTTCATATAAAACAGAAAACGAACCAAAGCTAAGCCACAAAGTCATCAATAGAACTGGTAGAAATTACCCTCTTTTACTCTTTTTGGTTCTTTTGATGCAAGCCTCTATTTCACTGTTAAGTTCCTTGCCCCAAAGAAATTCCAGAAAGAACAAGAACATCACAGTTTACAATAATAGAGAATTGGGCATCTCCAGGATCATGGACTCAACTCATTAATCTATATGTTGCATGGCAACCCTTAACAAACAATCAAAGTAGCAGCAAAATGTAATACAATTTCATAATAGATAACAAATGGGGAAAACTGCCTTGGTGGGAAAGAGGAGACATTAAATGCATACTACACAGAATTTACACAGAAAAATCATCTAGTGCCGATGGCTTTGCTCATCATAGATGACTTCTTCAGAGCTAGAGTTCAACATCTTAAGCCAACAATTATATGCAAGGATAACAAGAGACCATAACAATTTGGAAGCAAGACGTGCAGTCGTTTCATTAAAGAAAAGTTTTGCAGATTAAATAATCAAGAAGGTCATTTAAAAAAAACATTATTCTTCATAAAAGAACTTAAATAATGTATTTAGAGCACAGATTGCCAATAGAGCTGACCTCAAGATATATTCTGGTAAAAACAACAGTTAGATGAATATAATTTTAACAGGATGTTAAAAATGTTGATTAATGAATAGCATGCTGTCAACATAAATGAGGAATAGGGAAGCGAATAAATAGTAAACAGTTTGGTTTGTAGATGGTATGCAGACTCCGCATAGCAAAGTAGATACTCCCCACCTTTTCTTTTCTTCTTCTAGCCTTTGCTTATCAACAATATTCTTATTCTCTGCTGGCCCACGCGCAACAGGAGGACTTTGAGATTTGGTAATCGGAGAGCTAGTGACACTCCGACTTCTCTTTCTTCTGTAGTGTCTTTGCGATGGAGACCGACTTTTATGTCGCCTGGGAGATGGAGAACGACTAATGCGCCGTCTTGGGGAAGGTGAAGGGCTCTTCCTTCTACAATACAAAGATTGTTGATGTGAGGACAAAATAGGTGCATAGTAACTAAAAGGGGATCACTGTCAGTTACAGAAGCCCTAAACAGTGAGCGAAAGCAGTTACCTCAAACATTGTTAGAATAACCTTTGGAGCATTCCACATGTACACAGCATAGAGTAAAAATCTTTGTAGGTTCCATGCTTTTTACCGAAGGAATACTTGTTAGTCCATATTCCATGCAGACAAGCAATGCAGAATAAGGAGGTACTATATGTAAGAATTATCTGCTCATCAACTATGTGTTCCAAGTTGCCATTTTTTATACTCATCACACATTTTATCTCAGACTCTTGGTTCAGATGCAAAATGGTTATAAAAAACTTGGTTTCTATATCAGAACAACTGAGCGAGAACATAAAACAATACCGCCAGGACCTAGTTTGATTAAGGGGATTTAAATTACATCATTGGGGTTTAATTACAGAGGATTAAAAGTCAGACCTTGAAAAATAAAAAATAGTTTTGACAGGAGAAAGGAAGCAGCTTAGCGAGAACATCTTCTTCAGATATAAACCCAGCCCTCCATGTACTATATTCCAAAACTTCATACTATGTTTAACAGCTGTAGCTCTACTCTCCTAAATACTTTCCATGAAACAGTGTGTCATGGTATTACTATGCTGTTATCTCAATAGCTTCTCAGCTTCATCTCTAATGGTTTGATCATCCATATCACTAGATAAGCACATGCGTTTCGATTAGGGGAAAATGGTGGGCAGTGAGATGAATCAATAGATTCTCAAAACACCACTCTACTGGCCAAAGAAAGTGCTCAGTAAATCATGTACTTAATCCCCCTGTCTTCTGGAATACCACTGGTATCTGGTGGCAAATGCAACCAGCCACATTGACCTTAGTGATACTACTGCTGACTTGTAGCACGTGTAAGCAATGTTCAAAGGATCGTCGCCCAACATGTCATGGTAATAGTAGCCAGTGAGCACAGCGTGCACAGGTGCACCCAGGGCATGCATCATTGCTTTGATCTCCTGACTTCAATCATAATCGTACGGAATGGCTAAAATCTACGAGACTATGGCATGCTAAAAGAAAGTGAACGGAAGTTCTGAATAGATTGAATTCATTGGATAAATCTTTAGGAGTTCTCCAAATGGTACCTACGCATCATCTAGACTACCCAATCAGCTCCTATCGCCCGCATCAACTTCAAGACTACGCAACAAATAAAAGAAACCAGAGATTTCTCCATTATACTAACTGATGGTTTAACGAAGTACTGCACTTACTAACATTAAGTGTGCTAATAGCATAGCACGCTAGATATTTATATTTATAATAATCAGCTAAACCATCTATCCAAAGATGATAGATCGAACAACAGCCAGAAGCAGAATCAAAGTTTCATTTCCATTAAACAAGTCTGTATTACAGTACATCGCCCAACAAAATTACTGTAATAATAATCAGATTAGCATCTCTCTCTCTCTCTCATTTTTTTTAGGTGTCCTTCCTACACAATAATCCTACTTACTAAACACAACACAAGGAAGGATACGAAGAGGAGAATAACAAAATTAAAGACGGGGGGGGGGGGGGGGGTGGGGGGGAACGCCGCGCCAGATCGCGCGCGGCGGTTGGCGCGTGTGTACTGTGTGGCAAGGGGGGAGGAGATGAGAGATTCATCACCTATAGGAGGAGCGATACGGGGACCTGCTGCCGCGGCTGGGGCTGCGGTCCCTGCACGCCCTGCGTACTCCCCGGTGGTACCGCGGCGGTGACGGCGAGCGCCGCCGCCGCCGGCGCGGCGGCGGCGACCGCGACAGGTCGCGCGGCATCCGACCCGGGAGGAAGGCTACCGCTACACCCCCCGAATCCCGCGGATCTGGCCGGGGCACGGGACACCGGAGGAGGATCGGTGGCGGGCGGGCGGCCGGCCGGCGATCGATTCGGAGGGGGGAAGGCGGCGATGGCAGCGGCGGAGGGAAGAAGGGGTTGGGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0102800.1 | 11 | 19996148 | C | A |
| Osa11LNT0102800.1 | 11 | 19994389 | T | C |
| Osa11LNT0102800.1 | 11 | 19992281 | A | G |
| Osa11LNT0102800.1 | 11 | 19992575 | A | G |
| Osa11LNT0102800.1 | 11 | 19993874 | A | T |
| Osa11LNT0102800.1 | 11 | 19994203 | C | T |
| Osa11LNT0102800.1 | 11 | 19994335 | G | A |
| Osa11LNT0102800.1 | 11 | 19995657 | T | A |
| Osa11LNT0102800.1 | 11 | 19995967 | T | C |
| Osa11LNT0102800.1 | 11 | 19996111 | A | G |
| Osa11LNT0102800.1 | 11 | 19996589 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0102800.1 | osa-miR5815 | Translation | 4.5 | 14.318 | 1 | 24 |
| Osa11LNT0102800.1 | osa-miR5817 | Cleavage | 4.0 | 10.783 | 1 | 24 |
| Osa11LNT0102800.1 | osa-miR5826 | Translation | 5.0 | 10.787 | 1 | 24 |
| Osa11LNT0102800.1 | osa-miR2873c | Cleavage | 4.0 | 13.587 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR6245 | Cleavage | 5.0 | 14.733 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR413 | Cleavage | 4.0 | 13.242 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR396e-5p | Cleavage | 4.0 | 12.746 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR444a-5p | Translation | 4.5 | 12.937 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR816 | Cleavage | 5.0 | 17.364 | 1 | 20 |
| Osa11LNT0102800.1 | osa-miR1438 | Translation | 4.0 | 11.921 | 1 | 22 |
| Osa11LNT0102800.1 | osa-miR1860-3p | Cleavage | 4.5 | 17.867 | 1 | 22 |
| Osa11LNT0102800.1 | osa-miR2099-5p | Cleavage | 4.0 | 11.692 | 1 | 22 |
| Osa11LNT0102800.1 | osa-miR396f-5p | Cleavage | 3.0 | 13.121 | 1 | 22 |
| Osa11LNT0102800.1 | osa-miR2864.2 | Translation | 5.0 | 11.811 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR2866 | Cleavage | 5.0 | 16.732 | 1 | 20 |
| Osa11LNT0102800.1 | osa-miR396g | Cleavage | 4.0 | 12.746 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR396h | Cleavage | 4.0 | 12.746 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR396d | Cleavage | 4.0 | 12.746 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR5073 | Cleavage | 5.0 | 14.322 | 1 | 23 |
| Osa11LNT0102800.1 | osa-miR5337a | Translation | 5.0 | 13.966 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR5491 | Cleavage | 5.0 | 21.806 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR5492 | Translation | 3.5 | 17.812 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR1426 | Translation | 4.5 | 15.239 | 1 | 21 |
| Osa11LNT0102800.1 | osa-miR2097-3p | Cleavage | 4.0 | 17.058 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0102800.1 | 11 | gpl11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0102800.1 | 11 | gw11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0102800.1 | 11 | yld11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0102800.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0102800.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0102800.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)