© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0008400.1
CTAGCACCAAGTGGAGATACTACACGGAGTACTCTGTCTCCCTCTCGTCTTCCTCCTCCTCTCCTTCCGCCGCGGCGCACCACGCACGACGGCATACCCCCTCCCCCTCCGATCTCCCGCCGAAACCTCCCCCGCGCGTCGTGGAGCAGACCAGATCCCGACTGCGCCGCGGTTTGCGCTAGCCGCAGCAGCTCACCCGTAGATTCCCCCCCCCCCCCCCCCCCCGCGCGCCGGCCGCGGCGCTTGTTCGCCTTCCGGCGATGCCGACGCCGAACGGTACACCTCGGTGGCAGCGCTACTCCGCCGTTCTCGCCGCAAGAACATCTGTTGTACTCTCCAAAGTGTTGATGCATCATCTGTAAAGATTTTTCCATCACCTCGGTAGAGAACCTGTGATCTTGGTTCATCTTCTGCCGAATACGAAAGAATTCTAATCATCATTCTGCATAAAAAGTTGGATCATGCAAGTAAATGAGACACCATGGAAAAGATAGACTTTTTCTATAACAGCAAACTGAGAGGCAGCATGGATTGTGTCCCTCTGCAGTATGGAAAGATGAGAACGATTAAGAGGTTTAAATGCACTTGATATTTGCAAAAATAGAAGTTATTTTGCAAATCCACAAAGCAGGAATATCAACATCATCAAAATTGCTATAGGATTTCTTGAAGTTATTGGAAGAGTACGTACAAAATTCCTGGTCCGGCAACTTCCCTGAACAACCAGATTTGTCATGTTACCTATGAGGGTCCAGAGAGATCATGGAACTGGATGTGACAATTAGTGAAAAAGAAACATCTTGTTGTCAGGAGGACGTGAAGAAATGTACACAGATTGCTTTGGCTTCAGTTTTCCCTGCCTTTATCACGGACTTCCTGGGAGCTTATGGCTTGCAGGAAGCCTAACTCAGAGATCTGGTCGACCTCGTGTCCAATGCTTTCTTGTAATTTCTTCACATGCATCTACTTGATCACTTTGTTTCGTGTGTCGCCTTCAGCTCGGCTAGCTTGTGATCCCGAGTTCTAGAAAAGCATCTGGAAATGAATTGAGTTCTACTTTCAGGAAGGGATAAGCTTGATTCTGTGCTCCGATCGATTAGGTCACTAATGCGAAATTGTTTCATCCATGCTGTTGACCAGTCATGTCTAAATTCTGAATTCTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0008400.1 | 1 | 6018425 | T | C |
| Osa01LNT0008400.1 | 1 | 6018429 | A | C |
| Osa01LNT0008400.1 | 1 | 6018559 | C | T |
| Osa01LNT0008400.1 | 1 | 6019001 | A | G |
| Osa01LNT0008400.1 | 1 | 6019124 | T | C |
| Osa01LNT0008400.1 | 1 | 6019799 | G | C |
| Osa01LNT0008400.1 | 1 | 6020327 | C | T |
| Osa01LNT0008400.1 | 1 | 6021491 | G | T |
| Osa01LNT0008400.1 | 1 | 6021543 | C | T |
| Osa01LNT0008400.1 | 1 | 6022462 | A | T |
| Osa01LNT0008400.1 | 1 | 6022784 | C | G |
| Osa01LNT0008400.1 | 1 | 6022991 | G | A |
| Osa01LNT0008400.1 | 1 | 6023283 | G | A |
| Osa01LNT0008400.1 | 1 | 6023609 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0008400.1 | osa-miR172a | Translation | 5.0 | 15.264 | 1 | 21 |
| Osa01LNT0008400.1 | osa-miR172d-3p | Translation | 5.0 | 15.264 | 1 | 21 |
| Osa01LNT0008400.1 | osa-miR1861e | Cleavage | 5.0 | 20.002 | 1 | 22 |
| Osa01LNT0008400.1 | osa-miR1861k | Cleavage | 5.0 | 20.002 | 1 | 22 |
| Osa01LNT0008400.1 | osa-miR1861m | Cleavage | 5.0 | 20.002 | 1 | 22 |
| Osa01LNT0008400.1 | osa-miR2919 | Cleavage | 3.0 | 14.774 | 1 | 19 |
| Osa01LNT0008400.1 | osa-miR5499 | Cleavage | 4.0 | 18.534 | 1 | 21 |
| Osa01LNT0008400.1 | osa-miR5501 | Translation | 3.0 | 22.257 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0008400.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0008400.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0008400.1 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008400.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008400.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008400.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008400.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0008400.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0008400.1 | 1 | qHUS-1-1 | Others | Others | RM151 | RM3746 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0008400.1 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008400.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)