© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0103300.1
GCGCAAACTGAAGAAAACAAAAAAAAAAACTAGAACAAACCTTTATTTCATAACTTTTTTTTCAGATCTTTTTCCTAACTTCTAAGGATGAAAACTACCAGTAATCCTCTTTTTGTTTCTTTTTTACTACTATTACATAGGGTTGTGACAACAACAGATATCAGTAATAATCATAGGATCTAAATAAATAAGAACAAGCAATGGAGTTGGGAATCACTCATCTTCGTCGGGCCTGCTCGCGAGGCACAGCTCATGGAGCTCATTGAGAATCCACTCCTCCCCAGTGTGGCCACCCAGGACAAGAACCCTGGTGCCGCCAACCACGCATGTGCTATGACCCCAGGCGAACTTGGGTGGCTGGCCAGGGACGTTCAAAATCCTCCATGTCGGCTTCTCCTCCGCTGGGTCGAGGAGGAACAGCTGTGAGGGCGAGTGCAGCCCAGCGATGGAGCCACCGAATATGATTATCCGTCCACAGGGGAGGCTGACCGCGACATGATCGAGCCTCGGAGGTGGACCGATGCTCGGGAACCCGGTTGTCGCCAGTTGCCTCCATTGTGGGCTGTCTTCACCAGCGTCCATAGTGTAGGCATCACAGGAGCGTAGCCGGAGAGAGCCGCTCTTTGCCAACCCACCAAACATGAAGAGTTTGGTCTTACCAAAGACGGACAAGGTGTGGCCGAGGCGGGATGGTGGTGACCAGGATGTTGGGATCTCCTTCCATGCTGGTTTTTCCTTGGTGAGGTCAAGCAGGAATGTGTCACTGAGGAGCACACCGGATTCAGTGCACCCCCCTGAGACAACAAGCTTTGATCCATCCAGGGTACATGAACTGTGCCATGACCTCGGCAATGGTGGGCCCTCGCTTGCAACCTCCCTCCAGGTGGGCTGCTTGGCATCAAGGTCAAGGACAAAGACATCATTGAGCAAACCTTGCTGTCCACAGCCTCCAAAGACCACTAGCCATGAGCCATTCAGCCATGAGAGAGTGTGCCCCCACCGGCCGGGTGGAGAAGCTGAAACTTTGACACGGCGCCATTCAGGCTTTGCAGATTCCAGGTTGAGCACAAAGGTATCATCCATTGGCTGCATGTTGACTCCTTCACCTCCAAACAGGACAAGGCGATTACCAACAGCACAGGCACTGAAGTTGCAACGGGAAGGCTCAACACGACCTCCAACTGTAAACTTCCTCCATGAAGCTGCCTCAAGGGTTGTAAGCTCTCTTGCAAGACGACCCCATCCTAACATCTTGGTGCTCATCTCAAGCCTCACAGTGACGTCTCTTCCCCACGCGTTTTGACATACCATCTTTCTCAGGTGATCATTCTTGGTCAACTCATGCATTCTAGTGCAGACTGATCCGATGGATGCAACATCTCTTGGCGATAAGCGAGACAATATGTTGTGCGCCAGAACTTCATCTGAGAGCTGGAGGATGCAGCAGTACTCGGAACTTTGAATCTTAGGAATATGTTCATGAGAAGCAGGGTTGATCTCTTGAATGTTGGGTCTGTGGTTGGACTGTTGTTTATACACTGGATATGATACATTGCTAAGATCAATGTTAGCTTCAGAGAACAACTGGATTCCAATGACGTGAGTCACAAAACCATCATCCCCATGCATTGGAATGAGCCTTAGCCTGTTGTACAGTGGAGCACCGTCCTTCCGAAAATTCAATAGCTCACCTTGGAACTCAATTCCCTCATTCAAGCATCGCCGGATCTCTGAAACAACCATGGGATCAACAAGCGGATGTCGTCTTTGGGCACGTGGATCCCGGAATTGTAAGAATCGGCTGAAACAAGTTTGAGTCAACAGAGTAATGTGAGAAGCTTCTCTAGGCCCTCAGTTGCGGCCGAGGACCTCGTCGGCGCGGTACCCCGTGGCGGCCTCGAAGGCGGCGTTGACGTAGATGACCGGGAAATCCACCTCCACCGCGTCCGACACCACGATCGCCGCCGCCCTCCCCTCCCACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0103300.1 | 11 | 20182586 | C | T |
| Osa11LNT0103300.1 | 11 | 20182996 | A | G |
| Osa11LNT0103300.1 | 11 | 20183002 | T | C |
| Osa11LNT0103300.1 | 11 | 20183019 | T | C |
| Osa11LNT0103300.1 | 11 | 20183914 | A | G |
| Osa11LNT0103300.1 | 11 | 20184919 | A | G |
| Osa11LNT0103300.1 | 11 | 20185152 | A | G |
| Osa11LNT0103300.1 | 11 | 20185245 | C | T |
| Osa11LNT0103300.1 | 11 | 20185281 | C | A |
| Osa11LNT0103300.1 | 11 | 20185333 | T | C |
| Osa11LNT0103300.1 | 11 | 20185352 | T | A |
| Osa11LNT0103300.1 | 11 | 20185460 | A | G |
| Osa11LNT0103300.1 | 11 | 20185876 | C | T |
| Osa11LNT0103300.1 | 11 | 20186003 | G | A |
| Osa11LNT0103300.1 | 11 | 20186130 | T | G |
| Osa11LNT0103300.1 | 11 | 20186231 | A | G |
| Osa11LNT0103300.1 | 11 | 20182596 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0103300.1 | osa-miR5795 | Cleavage | 4.5 | 21.766 | 1 | 22 |
| Osa11LNT0103300.1 | osa-miR169n | Cleavage | 5.0 | 19.772 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR169o | Cleavage | 5.0 | 19.772 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR166i-3p | Translation | 4.5 | 20.574 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR444b.2 | Translation | 3.5 | 19.019 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR444b.1 | Cleavage | 4.0 | 14.265 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR444c.2 | Translation | 3.5 | 19.019 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR444c.1 | Cleavage | 4.0 | 14.265 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR2926 | Translation | 4.5 | 22.807 | 1 | 20 |
| Osa11LNT0103300.1 | osa-miR5491 | Cleavage | 4.0 | 7.489 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR5499 | Cleavage | 4.0 | 24.627 | 1 | 21 |
| Osa11LNT0103300.1 | osa-miR5515 | Cleavage | 4.5 | 18.011 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0103300.1 | 11 | gpl11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0103300.1 | 11 | gw11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0103300.1 | 11 | yld11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0103300.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0103300.1 | 11 | qBFR11 | Resistance or Tolerance | Blast resistance | RM209 | RM5349 |
| Osa11LNT0103300.1 | 11 | qPH-11-1 | Morphological trait | Dwarf | RM229 | RM209 |
| Osa11LNT0103300.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)