© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0104000.1
AGCCATTCCAAAGGAATTCCATAGAATTCTTGATGTCACAATCCTTTGTACAAACGACAGAATAGGAAAGTTTTCCGTACAATTTAAATCCTACAAAATTCCTATAAAAATATTGTGCCAAAGGAACACTTAACAATTAAAGGACAATATAATACCGCTGCAATCAAATAAGCAACAAGATTTCCACTACTACTACTTGGTATCACCATCGCAGATCATCATCCTATGAAAGTTGACACCAATTTTGCGCCGGTCAACAACTTATATTCCTTTATGTCCACTTACATCTCAACGGGCATCAGAATACTCCAATAGTAGTCAGAATTTTTGAAGTTTTTAATGTACAAGATGTCTACCAGTTCCTATCAAAAGATCGCATCACTCCTTGTGCAGTTCATCATGATGCTGCTGCGCGAAGGATTTTGCGTGCTCTGCGACCTCTGCTTCAAGTGTTGCCTCCAGTAATAGGTCTGAGCCTTGTGGTTTATCTGAGCGGCTTGGAAGTAATCCAGCACTTTCAGCTGATATTGGTAGTATATTTAATAACCCATCACTCTCTTTGAATTGATGTCCAGAACTGCCACTCATTTCTGGGGATTCAGTTAATCTTGAATACATTGTTGCTTTGCTGTGTAGATCTGTAGAGCCTGTGTTTGCCAATTTCATGTCCTTTGATGCCAACATTGTGGGGATAACAGCTACATCAGCTTCTTTACCTTCAACTGGGCCAGATCTATTAACGGTGTCAGCATTATCCAACCTCCCGGAAAACTTATCTGGATTTGTTTTATAAAAGCTTTCAATTTCATCATGAACCATACTGCGGATTTGATGACGAAGTTCTTCTAGATTAAGCGCAGAGCCATCAACGGCATCATTTTTTTCTGCTTCATGATCCACGCCTACAGGGTTATGCTGCCTCATGAACTGTCCAGGAGTAAACCTAGATAAGTTCTGGACTTCATAACGAATTGAATCTAGCTGTGTCATAGCATCTTTAAGCTCCTTGTTAACCTGCTTTGCTGCAGTCTGCTCCAGGATCTCATCCATCTGCCTGCGGAACAACATGAGGCGCCCGACCGCCCTCCCGGTCATCCTCCCCGCCACCCTTGCGATCTTGATCATGTCGCTGCGCTTCATCATGAGGGAGCAAGCCCCGAGGATGACCACCAACTGGCCGGTGGAGAACCCCAGCATTCTGCCTTCCCCTCGAATCACCGGCCGCCGCCGCCAAGAGGGGGAAGAAGACGACCTTGCAACCTCCTAGCCCCACAACCCTTCCCTGCGCCAGGATCGCGGTTAAGCTAGAGCACGACGGGGCAATCCCCAACCGGCGCGTGGACCGGAAGCGCGCGCACCCGGCAGAGCCAGCCGGCGATGGCGGCGGGGCGGCTCGAGGGGGAGTTGCGTTGCCGATGCCACGCTCGCTAGGGCGGAGCCCCAGCCGCCGGCGGCGAGCGTGGAATGGCGGCGGCGGTCGACGGGCCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0104000.1 | 11 | 20483114 | G | C |
| Osa11LNT0104000.1 | 11 | 20482820 | A | C |
| Osa11LNT0104000.1 | 11 | 20483177 | A | G |
| Osa11LNT0104000.1 | 11 | 20483706 | T | C |
| Osa11LNT0104000.1 | 11 | 20483759 | T | G |
| Osa11LNT0104000.1 | 11 | 20484120 | G | A |
| Osa11LNT0104000.1 | 11 | 20484702 | A | T |
| Osa11LNT0104000.1 | 11 | 20484797 | A | C |
| Osa11LNT0104000.1 | 11 | 20484832 | T | C |
| Osa11LNT0104000.1 | 11 | 20484838 | C | T |
| Osa11LNT0104000.1 | 11 | 20484861 | A | G |
| Osa11LNT0104000.1 | 11 | 20485045 | T | C |
| Osa11LNT0104000.1 | 11 | 20485133 | G | T |
| Osa11LNT0104000.1 | 11 | 20486377 | A | G |
| Osa11LNT0104000.1 | 11 | 20486645 | A | C |
| Osa11LNT0104000.1 | 11 | 20486683 | A | G |
| Osa11LNT0104000.1 | 11 | 20486711 | A | G |
| Osa11LNT0104000.1 | 11 | 20486747 | G | A |
| Osa11LNT0104000.1 | 11 | 20486756 | A | G |
| Osa11LNT0104000.1 | 11 | 20487013 | A | T |
| Osa11LNT0104000.1 | 11 | 20487040 | T | G |
| Osa11LNT0104000.1 | 11 | 20487314 | C | T |
| Osa11LNT0104000.1 | 11 | 20487535 | T | C |
| Osa11LNT0104000.1 | 11 | 20487602 | C | G |
| Osa11LNT0104000.1 | 11 | 20487660 | C | A |
| Osa11LNT0104000.1 | 11 | 20487689 | T | C |
| Osa11LNT0104000.1 | 11 | 20487729 | C | T |
| Osa11LNT0104000.1 | 11 | 20487866 | T | C |
| Osa11LNT0104000.1 | 11 | 20485114 | G | A |
| Osa11LNT0104000.1 | 11 | 20487867 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0104000.1 | osa-miR1861o | Cleavage | 5.0 | 17.147 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861o | Translation | 5.0 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR393b-3p | Translation | 4.5 | 13.232 | 1 | 21 |
| Osa11LNT0104000.1 | osa-miR172d-5p | Cleavage | 4.5 | 24.212 | 1 | 20 |
| Osa11LNT0104000.1 | osa-miR1861a | Cleavage | 5.0 | 17.147 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861a | Translation | 5.0 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861b | Translation | 3.5 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861e | Cleavage | 4.0 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861f | Translation | 3.5 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861h | Translation | 4.0 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861i | Translation | 3.5 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861j | Translation | 4.0 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861k | Cleavage | 4.0 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861l | Translation | 3.5 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861m | Cleavage | 4.0 | 14.101 | 1 | 22 |
| Osa11LNT0104000.1 | osa-miR1861n | Cleavage | 3.0 | 14.101 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0104000.1 | 11 | gpl11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0104000.1 | 11 | gw11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0104000.1 | 11 | yld11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0104000.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0104000.1 | 11 | qBFR11 | Resistance or Tolerance | Blast resistance | RM209 | RM5349 |
| Osa11LNT0104000.1 | 11 | qPH-11-1 | Morphological trait | Dwarf | RM229 | RM209 |
| Osa11LNT0104000.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)