© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0104200.1
GTCCTCCAAATCACAAACAATAGCAATGTTTTTTTTTTCGGTATACACTACTACTTCACAGGAGCTTTGCACACGGCTCGTAATACCACGCAATCTAATCCAGCACACACGTACAGCAAACAAATACACTACACAATCTGCAATTTAAGAATTGGTTGCAGATGGATCGAATGCGTAACACGCTTCTCTGCAGTTGCTGCTGAAGAAGAAGAGGAAGAAACATCAGGGCAAGGCCAACTGGGACGTCTTGCAGTTCTCCACAATGGCCTTGGACTTGGTGTACAGGGAGGTGAGCTGCCCCTGCCTCAGCGAGAAGGCCTGGCTGAAGAGCTTGATCTCCTGCTTGAGCTCATCCATCCTGCTCTTCTCCATGTCCAGCTCCCTGAGCGCCTCCAGCCTGTCGGCGACGAGATGGTCGGCGTCCTGCCTCGCCTTGGCGAGCGCATCCAGTAAGGACGAGTTTTCTCTCTTCAGCGTGTCGCGCTCCTCCTCGAGCGCCGCGCGCCACGCCTTTGAATCCTCCAGCTGCTGCCTATCGGCGGTGCAGTCCTTCTCTAGCCTTTGGCATCTTGCGTCGATTGGTTCCTCGTCTGGAGTTGCAACTGATGCTTTATCATCTGCCAGGGATGGCGCACATTTGAAACCAGGTGTCATCTCAAGCATTTCGAGATCAGTAACACACCCCTTGTTCAGCTGCATCCAGAGGTCCTCATCAGCTACAGTCCCTAAATTTTCTGGTATTGGGCTGAATTCTACATCCTTTGAATAGTTCGCACGACTTGCAACAAACTCAGCTGGTCTCTCTTTAGAAGTTGGAGTTTTTAATGATTCGAACTGGATAGAATCAGTGAACTGATCTGGTGATATGCTGGTATTGCTAATGCCATCTAACATTTTTTGTTGCTCAGCCAAACGGTGCTCTAGTGTTTCCCTTAACCTCCTTTCTTCGTCAAGTTCCATTGCTAGTCGATCACGCTCAAGTTCAGACTTGTGCATGTCATTGCGCTGCTTTAGTATAACCTGCTCCAACACTTCGGAATGAGAACCCTGCAACTTTTTGCGAAGTTCTTCTATTTCCTGCTTTTGCCTCTTCAGCAGAGCTGCATCTGTTAAAATCTCATTCACTTGAGCACAGTTGCTGACACATTTTGCTCTACTTGCAAATTGAAGAGTTCCTCTGGTTTCCTCAACATGAATCTCCTCAGGAGCAGCAGTGCAAATGATTGATGTTTTTGCATTGCCTCCAAGTGCAGGTTGTAAAATGCGCGTCAACTTACTATCACGATAGGGGATGTGCCCTCTTTGCTTTCCATTCTCACTCAACTTATTGATGACATTCCCAAGAATCATCAAGCTTTTGTTAATATGCTTTCCCTCCTTGAGACGCACACCTCCAGCTCCGGTCTTGGCAATTCTTTCTGAACCAGCTAAATCCACCAAATTCAAGACAGATACACGGATAGCATCTCCAGAATCCATGTGGTTCTTTGCGCTGCTTTCAATGACCATTCTGAAAATAGTATGTGATCTGCTGCTCCGCACATTCATATTTGTCTCCCCAAAATGCCTATTTGCTTCTCCAAGCTCCAAGAGCTTAAACACTTGCTCGGCACTGTTCACAATTTCCTCCCGTAGCCCAGACACATAGACACCACGCTCTAAGCTCTCATGAATCGGCAGCTTCTCGCTCCCGAGCGTCAAGAGGTCATTGATTTCCTCGTTGTAAATCTCCATGTAGGAGACCCTGATGAGGAACTCGCGGTCCGAGACCTCGCGCGCGGTGTCGAAGACGTCGCGGACGGCGAGCGGGATGATGCCTGGGTGGTCGGCGGAGCCGTTCATGGTGAACGTCTTCCCACTGCTGGTCTGGCCGTAGGCGAAGGCGGTGCCGTTGAACCCGTCGACCGCGGCGCGGATGAGGGAGCGCACCAGCACGCCGTAGATCCGCTCGTTCGTGGCCGCCCCGTCGAACACGTGGTCGAAGGCGAAGGAGGCGCCGGGGACGGGGGCGCTGCGGTGGAGGAGGGTGATGCGGGTGTCGTCGTCGACGCGCCACTCGCGGTCGCCGCCGGTGGAGGAGGGGGACTGGTCCGCCGCTGGGGCGGCGGTTGTCGGCGGGCGGAAGCGGACTGCGACGGAGATCTTCTCCATCGTCGGCGGAGGAGGAGGAGGAGGACGGCGGCGAGGTGGGCGGCGGCGGCGGAGGATTTGAAATTTCGGGGAGGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0104200.1 | 11 | 20572166 | G | A |
| Osa11LNT0104200.1 | 11 | 20572807 | A | T |
| Osa11LNT0104200.1 | 11 | 20572879 | A | C |
| Osa11LNT0104200.1 | 11 | 20572893 | C | T |
| Osa11LNT0104200.1 | 11 | 20573005 | G | A |
| Osa11LNT0104200.1 | 11 | 20573099 | T | C |
| Osa11LNT0104200.1 | 11 | 20573101 | A | G |
| Osa11LNT0104200.1 | 11 | 20573123 | A | T |
| Osa11LNT0104200.1 | 11 | 20574545 | A | G |
| Osa11LNT0104200.1 | 11 | 20574548 | C | A |
| Osa11LNT0104200.1 | 11 | 20575128 | G | A |
| Osa11LNT0104200.1 | 11 | 20575511 | A | G |
| Osa11LNT0104200.1 | 11 | 20576264 | G | A |
| Osa11LNT0104200.1 | 11 | 20576501 | C | T |
| Osa11LNT0104200.1 | 11 | 20576537 | T | C |
| Osa11LNT0104200.1 | 11 | 20576598 | G | A |
| Osa11LNT0104200.1 | 11 | 20576693 | T | C |
| Osa11LNT0104200.1 | 11 | 20576732 | T | C |
| Osa11LNT0104200.1 | 11 | 20576805 | A | C |
| Osa11LNT0104200.1 | 11 | 20576983 | G | C |
| Osa11LNT0104200.1 | 11 | 20575618 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0104200.1 | osa-miR5835 | Translation | 4.0 | 18.273 | 1 | 24 |
| Osa11LNT0104200.1 | osa-miR1437b-5p | Translation | 4.5 | 12.912 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR164a | Cleavage | 4.5 | 13.781 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR164b | Cleavage | 4.5 | 13.781 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR397a | Translation | 3.5 | 14.162 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR164c | Cleavage | 5.0 | 13.781 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR164c | Translation | 5.0 | 14.252 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR164d | Cleavage | 4.5 | 13.781 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR164f | Cleavage | 4.5 | 13.781 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR1866-5p | Cleavage | 4.5 | 17.913 | 1 | 24 |
| Osa11LNT0104200.1 | osa-miR2870 | Cleavage | 4.5 | 11.155 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR5075 | Cleavage | 1.5 | 18.27 | 1 | 21 |
| Osa11LNT0104200.1 | osa-miR5339 | Translation | 5.0 | 14.384 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0104200.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0104200.1 | 11 | qBFR11 | Resistance or Tolerance | Blast resistance | RM209 | RM5349 |
| Osa11LNT0104200.1 | 11 | gpl11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0104200.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Osa11LNT0104200.1 | 11 | gw11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0104200.1 | 11 | yld11.1 | Resistance or Tolerance | Drought tolerance | RZ537 | RZ900 |
| Osa11LNT0104200.1 | 11 | qPH-11-1 | Morphological trait | Dwarf | RM229 | RM209 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)