© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0008800.1
GGTCGGAGTCTGCACACACTGCATGTATATAAGAGCTGTAATTCCCAGTATAGTTACAAGGACACACCACACACGTAATAACAAAGAGACAGTTTCAGATATTCCGTCGTCATTTCTAAAAGAAACTCAAAAAGATCAGAGGACTGCATATCTACATATGATGTTCATTCTGAACTTCGTGGTATAACGATCCAAGAACAGATGAGCTTCCCTTTCAACCTTTAGGTGCTAAAATCTGTGCCACGCCTCGAGTTGGTTTGTAGCATACTAGCAATTTTGGTCATACAACTCAACTACTCAAGCATCACATCTTTAGAACAATCAGCATGACATATTTTGGGTACTTGGCTGGGCACCATACACTTCACGTATGGGTGAAATCTTGCGACAAAACTGCTCAGGGGCAAATGTTGCTCAAATCATGAAATTCTTATGAAGCAAATGAGGATGACTCTTCAATCGACATCTGTTCTGTGGGCTTTAGGTACCAATTACGTGGGTTGCTATCCGTTGAATCGGAATTTGAAATGTACAAGACCTTGTTGTGGAACTTGTGCAGTGTTTTCCGGTGACCAATGCTTATGTAAGTAATCCCTGCAGCTTCAATCTGACTGTATAGATGACGCTCATTCATATCATCTAGTGCACTTGTGGACTCATCAAGGAGGACTAAAGTTGGTTTTGCAAGTAACAACCGAGCAAATGCAAGACGCTGTTGCTCCCCCAGAGAGAGAACGCTGGCCCAATCATGCATAGAATCCAAACCATTGAAACGAGGCAATATATAGCCTAACTTAACAGCCTCAAGTACTCTGATCAGTTCATCAGTTGTGGGCATCTCAGACTTGGAACCAACTCCATCTGATGTGGAGACTTCAAAGGTAAGAGGGTCTGTACTTTGAGGATCATTATTTGATGAATGACAAACATCTTCAGTCCATGTAGGATAGAGCAATTGCTGACGAAGGGTTCCCAAAACCATATATGGTCTCTGTGGAACAAAGAATATACCATTATCCCTTCTCTGCTTTGAACTTTGTAGCAGTTCTTCACCGTTTGACTGTATGTTGGATGGCTCATCAGGACCTGAATTTGATGTTTGAAGCTCCATGGAACCTCTCACATGGTATATGATGTCCCCAGTACCACTGGTCCAAAGGCCAGCCAAAGCACGTAACAAAGAGGTTTTCCCACTTCCACTGGGCCCCATTACCAGTAGGTGGTCCTTTTCTTTGAGTTCCATAGTGAGGTCAGTAATAAGAATGTTTCCACTCCTGGGTGTTAATAATGTCAAATTACAAATCTCAAGAACCATGGATGGATTAGATTGTGTCGGTGATCCATTGGAACTCAGTACAGTAGGACCAGTGCTCTTGAAAATTATGTTGATCCCATCAATGTTATCAGGCTTGGATAAAGATGAACCATTTCCATCCAACAGATCATCAAATTCACCTAGACGATCAATAACCGCCGAGAATGCACTAATTGACTGAAACTGGAACACAATGAGAGAAAAATCACTAAGGATATGATTGAAAGCAGACACTGATTGATTTATTACTCCAAATTCAATTTTTCCTGAGAAGTACATCGGAGCAACAACTGCAGCTGGCAGGATCTGGATTAAATAACGGTAGCCATTGGTGAAAAACTCCAGATTACGAGATGCTATTAGCAATTCGCTAAGGTTTTCAAAAGCCCTCCTGAATCGATCCAACAAAAGTTGCAATTCATTTTCTTCACCGCCATAAAAAGCAATTGATTCAGCATTTTCTCTAACTCGGACAAGTCCATAACGAAAATCTGCTTCTTTCTTTTCTTGCATGAAGTTCAAGTTGACCAAATTTTTACCAAGGAAGATACTAATTCCAGTGCCCCCAAGGGAGTAGACAATAAGAACAATGAATAATGGTGGATAGATCCCATAAAGGATGTTACTGAATGATATCAAGTCCACGGCAGCATTTAAAAATGTCAGAGAAAATGCAAGCGCGGTTCCAGTGAATGCACTGAGATCATCATTGATCCGTTGATCCGGGTTATCAATTAGTGATTGAGATTGAATCTTATAGAAAGTTCTATTTTTAAAGTAGCGCTTCATGTAATAACTTGTCATCCAAGATCGCCATCTTAAAGAAAGGGTCTCCCTTGCATAGTCTCTCAAGACAAAGAACTACAAAAGAGCAGCAATATGCTCACCGGTATTCCTACAGCAAAACCTCCCAAGTAATACAGCAGTTGCTTGGTAAATTGTTCCTGGTCCTTGTCTTGCAAGAGAAAACACTAAATGTGTGTTAGCATAAAAAAAATAGAAGCTATTGTACATCCACTTTGGACTTTTGATGACAATGGCATGCCACCTTCAGTAACACTTGTAACAATAAAAAGCAGAAGTGTCCTTATATTTTGTCTAGTTTGAGTCTTGCAGATCCCCGAAATTTTCAAATGAGGGTGTGTCCATTTTAGTACAATAGATTTAGTGTGTACGATATAAAGGACCTCTCCCTCTCTTGTTCCCTTGCATTGTTATGTGCACTGCAAATCCGTGTGTGTAATTTTGTTCAGAACGTACAATGAATCTACAAGATAACAATTTAAACAAGACAGAACATACCAGCAAGGGCATTGTAGAAGTCACGACCCAGAAAGTTAAATCCAACACTAATTCCAGTAGTTGCTAATGTAAGAGCAAATACTGCAGCAAGCCTCAGCCTCGCTTGCACTTTATCTTCTGACCACCAGTAAGGGGCAGCAACTTTCCAAAATCTTCTAGCAAGTGTTTTGAGGTCCGTTTCAACTCTCTTATCCTCGGCGCCGGGACCAGAGCCGCCGCCGTCGCCGGTGGCCTCCCCTGCGGCTGCCGCGGCGGGAGGGGCCGTGGCCCTGCGTCGCCGCCCGCGGCGGCGCATGGAGGAGGATGCCACCGCGTGGGGCCAGTGGAAGCGGGCGTGCAGCGGCAGCGGAGAACCGAAGCAAACCCCGGGGGAAACAAGCCGCCGCCGTCGCCGCGGCGGCTGTGGTGGTGGTGGTTGGAGCGGGAGGAGCAGTAGCCGCGGGGACGACGACGAAGTGGAGGGGAAGCAGCACGCGGGCGCAGCAGCAGTAGGTAACCCCATCTCCGCTCGCGTTTGGTAGCTTCTCGATTCCGCTTTTTCTTCTCCTCCTCGTGACCTCGCGTGCTCTCGCCGCGGCGAGCAATGGCGGCGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0008800.1 | 1 | 6500733 | A | G |
| Osa01LNT0008800.1 | 1 | 6500827 | G | A |
| Osa01LNT0008800.1 | 1 | 6501816 | C | T |
| Osa01LNT0008800.1 | 1 | 6502656 | T | C |
| Osa01LNT0008800.1 | 1 | 6503036 | A | G |
| Osa01LNT0008800.1 | 1 | 6504300 | A | T |
| Osa01LNT0008800.1 | 1 | 6505158 | A | T |
| Osa01LNT0008800.1 | 1 | 6505234 | G | A |
| Osa01LNT0008800.1 | 1 | 6505468 | A | G |
| Osa01LNT0008800.1 | 1 | 6506586 | G | A |
| Osa01LNT0008800.1 | 1 | 6507000 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0008800.1 | osa-miR5529 | Translation | 4.5 | 17.85 | 1 | 21 |
| Osa01LNT0008800.1 | osa-miR5079b | Cleavage | 4.5 | 10.356 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR812a | Cleavage | 4.5 | 21.118 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR812b | Cleavage | 4.5 | 21.118 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR812c | Cleavage | 4.5 | 21.118 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR812d | Cleavage | 4.5 | 21.118 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR812e | Cleavage | 4.5 | 21.118 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR1429-5p | Translation | 5.0 | 10.622 | 1 | 21 |
| Osa01LNT0008800.1 | osa-miR1878 | Cleavage | 4.5 | 9.109 | 1 | 24 |
| Osa01LNT0008800.1 | osa-miR2104 | Translation | 3.0 | 24.854 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR2869 | Cleavage | 5.0 | 21.072 | 1 | 21 |
| Osa01LNT0008800.1 | osa-miR5079a | Cleavage | 4.5 | 10.356 | 1 | 22 |
| Osa01LNT0008800.1 | osa-miR5150-5p | Translation | 3.0 | 15.07 | 1 | 24 |
| Osa01LNT0008800.1 | osa-miR5491 | Cleavage | 5.0 | 16.719 | 1 | 21 |
| Osa01LNT0008800.1 | osa-miR5505 | Cleavage | 5.0 | 14.504 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0008800.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0008800.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0008800.1 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008800.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008800.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008800.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0008800.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0008800.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0008800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0008800.1 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)