© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0008900.1
GAAAGTCCCAAGAACTGTCAAACTACATTACTTCGGTGGCTAAACATACAACAGCATAAGCATTTCAAATAATTAATATTTACAACATATATGCATGCATGGTTTATGTACAACATACACGCTGGTTTGTGCCTTTGTGGATACTACATTGCGGATAGGGATCCTAGTACAGGCTTTCTAGTTGGTAGGTCACATTGTCACAGAGAAAATAGTGATTACAGTTTATGGACAATGCTATTTTCTAAAGCACGTCTAACAAAACAACATGACGGCACCAGAACCCGTTTGACCATATCACAATACAGTTTCAGTACCAGTGTACCACCCTCACTAGTCCCTACATACTACATGTTCTGAACTGTTAGGGGTGTTCATTTGTTCAACTGGAGATATTCTTGCGTTTTGATTTGCAATCCGGACAGAAATAATCAGCATTTTCCAAGTCCTCCATCTTGATGCATGTCTGGTCACATTCTACATGAACCCAAATTTGACACTCATCACAACAAACCCAATTTCCACCATCTGTATGGTGCCAAATTTTCTTGCATATGCCACAGTACTGCTTTGACTGTAATAGCTTATCACAGTGCCTACAGAGTAATCGTTCTCCCGCTTGCTTCTTTTTGCTTGCTATCTTGCATGGAAGACGATTACCGCAAATATCACATCCAGGTGATTTGCCAACAACCTGAGCCTCCGATTGGCATTCCTGCTCATTATTAGAACCAGACCCTTCCAGTAACCCGTCAGGGATGGACTGGTCATTGACAGACTTCTCTAGTGAGCACCCCTCATCCGTTTCGAGCTCAAAAAGGCCACGCTCAGCAAGGAAAGCCTCCTCAATTGCTTCACGGAATCTGCTTGCCTTGATCTTATATAAAGTTTGGCCCTTAAACCTATCTAGGTACTCCACAAAGGGAAAGATCAACCCTTGCTTAACCCATCCATAGTCCCTGAGGCCGCTATTAGAGTATCCGAAGAACATGACGCAGAGTGCACCCGGGATGCAGGAGTTCAAGACGACCCTTGGCGCATGAAGCAGTGGATCAATCACCAGCGCAGGCCATGCCGGGCACTTCTTCCCCGACCTCGCCCACACAACATCCCCGAGCACGAATTCCTCCGGCCAGTAGAAATCCTCTTTCCTCTCGCCGCCATCGCTCTTCGGCTTGCACTCCACCACCACCGTGGGCTTCCCCTCCGGCCGCCCATTCCCCCCGCCGCCGCCGGCATTGCTCAAGGACGTCACCGCGCTGCTACCGCTGAAGATGCTGCTGCTGAAGCTACCGGAGGTGGAGGTGCTGCTTCTCCTGATGTTCCTGCACGCCCAGTACAGCTCCTCCTCCGTCTGCACCGGCCGCTCGTCGCCGGTCCACAGCATGCCGGGATCCCCTTCTTCCAGCTCCACGTCGTAGAGCTCCCCGTCCACAACTCCCCCCTCCGCCGCGGCCTCCGCGGGCTTGCCCTTCTTCGCGGCGGCCGTCGGGAGCACCAGCACCGAGTCCTTGAACCGCGACGGTAACACCCGCTCGCGGCGGCGCTTGGCCGGCATCATCATGCCGCTCCCCTCTCCGGCAGGGGGCGGCTCCCCCATCTCTCCCCGGCGACGGCGGCGGCGACGGCTCAGCGATTGAGCGGGATGCGGGACGCGAGCATCGCAACCAACCCCGGGGGGGAGACAAACCCTAGAATCCCCGGCTCGGTTGGCCAGCCAATCCGCGGGGCTCCGGGATCTCGACTCCTGGGAGAGGAAATCGAGGAGGCAACGCGCCGGCGCCGGGCGGGGCGGCGGGCGAGAGAATTTTTGGGATCTCTCCGGTACTCCGATCGAGCTCGAGGGATGGGGGGATGCGGCGCGATGTCGGACAGGAAGCGAGGTGAGTGAGCCTGCCGAGGTAGAGGCAGTGAGGCAGGGTGGGGGAAGGAAGACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0008900.1 | 1 | 6519374 | A | C |
| Osa01LNT0008900.1 | 1 | 6519674 | A | G |
| Osa01LNT0008900.1 | 1 | 6520771 | C | G |
| Osa01LNT0008900.1 | 1 | 6519427 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0008900.1 | osa-miR5805 | Cleavage | 5.0 | 16.512 | 1 | 24 |
| Osa01LNT0008900.1 | osa-miR5827 | Cleavage | 5.0 | 17.786 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR5516b | Cleavage | 5.0 | 18.557 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR156c-3p | Translation | 3.5 | 23.139 | 1 | 22 |
| Osa01LNT0008900.1 | osa-miR156f-3p | Translation | 2.5 | 23.139 | 1 | 22 |
| Osa01LNT0008900.1 | osa-miR156g-3p | Translation | 3.5 | 23.139 | 1 | 22 |
| Osa01LNT0008900.1 | osa-miR156h-3p | Translation | 2.5 | 23.139 | 1 | 22 |
| Osa01LNT0008900.1 | osa-miR160a-3p | Translation | 4.5 | 21.468 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR160b-3p | Translation | 4.5 | 21.468 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR156l-3p | Translation | 2.5 | 23.139 | 1 | 22 |
| Osa01LNT0008900.1 | osa-miR160e-3p | Cleavage | 4.0 | 21.468 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR408-3p | Cleavage | 4.5 | 17.228 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR390-5p | Cleavage | 4.5 | 13.769 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR1850.2 | Cleavage | 5.0 | 13.929 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR5498 | Translation | 4.0 | 12.376 | 1 | 21 |
| Osa01LNT0008900.1 | osa-miR5516a | Cleavage | 5.0 | 18.557 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0008900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0008900.1 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0008900.1 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0008900.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0008900.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0008900.1 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008900.1 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0008900.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008900.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0008900.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0008900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)