>Osa11LNT0109000.1

AAAACAAAAACAGCAGGAAGAAATAAAACGATGTTGGGGTTTCCAACTTAACCAGAAGTACAAAAATCTGATCACAAGCTAACAGAGACACCTAACCATTTAGGTGCCCAAATTTGATCATAATCTCGTAAGCATCAACATCTCAAAAAGAAGGTGAACTCTATGACAGTAAAGATGGCTCGGAACAAAAAAACTGGAGAAATTTCCTGACAACTGTTCTGCTGGTATTAGTTTGGTGATGGAAGGAGCTTCCTCAGTGTAATTGAAGTTCTTATCTGCTGCTCAAGCTCCCTGCCACCCCATTGCTGAGCACCTGGCTTGCGGTTTATCTCATGTTTCCATAAGTATCTCGCGTCGCCTGACATGAGAACAAGGGACCCTGGGTTCAGGTAGACAGGGATCTTTGTAGGTTCAGCATGCACACTCTCCAGTGTCTCACAGATAGGAACTTCTTGTTCTGCCCGACTGAAGTGCATCACGCATGGTGACTCAAGGGAGACTATCGCGATTCCATCATCAAAGCGCATCAGATCAACATGAGCACAGATGCCCTGGCTCGTATCTGTTTGCGATCATTTGGTCAAAAAGCGGTTTCCTCCACAGCAAATCTGATGGTAAAGGACATGCATCTTCGTCCTCATTTTTCAACTCCAAACCACAACCAACACGGACATCACCAAAACAAATAGCCTCATGGATAAGCGCAGAAAGCTCAACAGCCCATGAAGGAAGATCACCAAATCTCATTGCTTGGTTGCGTGCATCGCTGAACCATCCTTCTCGCCGGATCGCCGTGAGTAGGCGCGACTGCTCGTCGGCGGAGAGGAAGGCGGCGCAGAGCCATAGCCCCCTCACCCCCTCCACCGCCTCCCACCTCCACTGCTCCCGGCCCGCCCCGCCAACGGGAAGGTCGTCGGCCTCGCTGTCCGATGAGTCGCCGAATACCTCCCGGAGCGCCGCCGCCCGCCGGCGAAGCTCGTCGTCGTCAGCGGCGGCCGCCATGGTGGCTTCGCTT

Explanation	CPC Score
noncoding	-1.32262

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0109000.1	11	26311002	A	G
Osa11LNT0109000.1	11	26311037	G	A
Osa11LNT0109000.1	11	26311147	G	T
Osa11LNT0109000.1	11	26311423	A	G
Osa11LNT0109000.1	11	26311610	C	T
Osa11LNT0109000.1	11	26312353	A	G
Osa11LNT0109000.1	11	26311272	T	G
Osa11LNT0109000.1	11	26311909	C	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0109000.1	osa-miR160c-3p	Translation	4.5	17.109	1	21
Osa11LNT0109000.1	osa-miR159e	Translation	5.0	20.865	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0109000.1	11	FON3	Morphological trait	Panicle/flower	RM4601	RM1233

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus