© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0109300.1
GCAAAAAGAAAATGTTACTAGCTGTTTGCAAATGTTGATATGGCATGGAATCTTGGTTGTTTTTTTATAATATATAACATTTAACAAATTAAATCATATAGTTGAAAACTTTGGGACTTTGCCTCCATCATCTTTTGCCCTTGGTCAAACTGCATATTTCATCAGCGCGACCGGAGACCACCGCCCAACCGCCGCACGCGGCCCAATCAGTGCTGGCCTCCCGCAGCTGCGTGCGACCTTTGCCTGCGAGAGAGAAATAAAAGGGAGGAAGAAGAAGAAAGGAGAAGTTGGGGCAAGGTGCTATAATCTAGTATTTTGCAGTTGATGGATGCGATTCAACGAAGGGCAAAAGATGAGGAAAGGAAACTGAAATGGCATGGAGATAAACATTTCGTCGAACACCTTACCGGTCATGTGAGCTGCCGTGGTCTGGCCCTCCCCCAGATTAAAACAACTAATTGCACCAAGTCACTTACCATTCCCCAAGTCTATTGTACCTCCCTTATCATTGGGCCTCTCATGGTCCATTTGTTTCTTTGCATGTTGCTGGCTGTTCTGTCATCTACTACCCATCTGTAACGACACATGAACTCCAAAGGGCTGAACAGAGAATATCTTCATATCTCAAATATTGGCTTCTCCTCATTGACTAAAATAACTAATATATGTACAATCAGATTAATTTAACTTATATTTCATTGCGTGTCCACAGCTCAATTAATCTTTGTTTCTGCCATCACTTATCATTCCATTTGCACGCTTCACCATATGATATATTTCTAGCTTAGTTCATAACAAAAATTAAAACATGCATGCATGAACTTCTGTAGCCAAATTTACCTGTACATCCAACCTATTTGTTGTCACTTGGCAAAGTTAATAGCACCTATACATGGGAAATTTGACACATTAGTGTTATGCTTTAGACATGGATGGCTTACATTGACTTACTGCATTTGACTCTTGTATACAACAATATGATAGACAATACATCTCCTGCTTGTGTCAGTAAGATAATCGTTGATGCCAGTCACTACAAAACCTTAATGCGTACGCTGCTAATTAACCAGAACCTTCAATTATTTTGGTATCACACCCACCCGTACGATATATAGTCAACCTTGTATTCTTAGATTTGGTGTTGCTAACCCTTAACCTTGGTGTTCCTCTTTGTCCTTCTCATCGGAAATAATATGACCGCCACTTAGATGTCAACCATCTATCAAGCACTCAAGCCTCATGCATGTTTATCTTTCATCACAATTTGTAGTCCATGCTTGGCCCAATCCAACTACAACTCATAGCACAGATGAACCTTTGTAACTCACATTTTTAACTTTGTTGTACAAGTAATTTGTGATTTTGTATTTAGGTTTACTGCTTTGCATTATTTAGAATTTATAATGAAGCCTATTTCTATTTGCTATCTGTGTTGTGGTCATGGAACCATTCATAATATGTGTTGTCTAGAGGCTGCTCTACCAATTCTACTATGCCGATCGGATCATGTGGCATGAATATGTAGTGTAATCATCATATACCATCCTATCAAACACTGAGTCTTTTTCTAACCAAGACCTAGCAAACACTAACTCACTAAGTAAAAGAAGAAACCATACTCAATACGGTTAGTGTGGAGTTCAACCTCCAAGAACGAATGAACCTCATAAACTTGAATTGGCACCATAAATATGTATTGTATCCGTTTTTTCTCGAAGGCTGGAAGCAAAGCATCAAGTTCTGGGAATTGCCTAATCATAAAGCTAATAACGCAATAATCAAGGAAATGTGAAAGGTGATAATAGAACTAAGCATGAATAGCAATAGCATTACCATAAGTCCATAACGCCAGAACAACATAAACTAACAGTATGTCCTCCCTCCCGGATGAAAGATCTTCCCTGCACAATCAAGAAAAATGGATCATATTTGAGAAGGGCACAGAAAAAATAATATTAGAGAATGAATAGGGAAAAATAAGTTCCAACTTTATAGGCTACTGAAACTCAAAAGCAGAGACAGACACAGAGAGAACCAAGATCAGCTGCTCCTATCACTGTGCTAAATGCTGTTATCGCTTCATCCTAAGTTTGTGTGAGTAAATTAGATTCCAAGCATGATTCAATCATGACAAATCATGTCATATATCACTGCGTCAACTTCCAAAGCTTGTGCGCCGGAATATAAATAAGAGCTCACCAAGATAAGAGTATAGATGACACTCTGTCCATTGTAGCCTCTGCAACATTTCTATCAATACAGATTTTAGTTAACCAACATGTTAGGAGAGGGTGTATTAAATACTATCGGAGAAACATACCAACTTCAAAATGCAACCAAAGTAAGAGAGAGTCCAGTGCTGTGTATGTGTGGTGTGCGAGAGAGGGAAGTTGGAGCAGACCATCATGTAGAAACTCCTCAGTTATTGAAGGATTTTTCTTCAACCTGCTCTTTACCTTTATATATTAGTCTAATTTTATGTCCTATGATTTAAGATCCATATTTTGATCAGTGATTTAATTTTTACATGATAAAGAAATTTGAAAGTACCTAAGAATAACTCCCACCAAATACTATTAAGCAAAGTTTTCAACAGAATGAAAACGAAAAGGGTTGCAACCCTTGTATCCATGAGCTATTACGAACAAACATAATAAATGAAGTACATGTTCTTCAACATTATCTTTGAAAGAACTGAGCTGATCATCCTAGTTTGTTAACTCACTAATGCTACCGGTGAGTTGTCATATATTCCATGGTAACTTTATATTTAGCGGATATGTACAAGGAAAAAACAGAAGAATATGGATGAATTCCTTTTTCTTTGAAACAGGATGGCTGTATTGTTTTCTAGGACTGAAACAACAAATAAGTTATAAAGGAAAATGACTATCCATTTGGTATAACCAACTTGTGGCAGACCTTAATAAGTTAGTAGGCATTGCAAAGAAGTCGACCCCCAAAAGCAATAGCTTATGTCATACCTAGAGTTCTAGAAGACTGGAAGCACAACTGGACATCAGCAGACCTTCTACCAGAATTCACTACAAGAGCATTTTCCACCTTCAAAATGGTGAAAACGACTAGAATCTCGCACAACGATCTTCCGATGGGTTATTTCACTAATTAACTTCATTACTGTATGGCAGTCCACACAGACCCGAAGGTTCTTCACCACCCGGATCACAGACCCTGGAGGAGACTTGATTAATCCAAAAGCAACAGCCAATCTCTCGCTGTGCAAGAAGAGATGGTGCTCCTTTTCGCTTTCTTCCAAGTCATGCATCACAGAACTAGTATCAGGAACATAACCCCTTTTGCGCATCTCCAATACCATTTCCTCAAGAAAAACCATAATTTCTTCTCTAACATCAAGTGGCACTTCCCCAGCATGAAACAAACGGAATTCTCTTCCAGCTTCAATCCAGCTATACCCTGGCTCTTTTCTTATCTCCAATCCAATCATGCACTTTCTAACCTTGGCTACGGAATCCCACTTTCCGTTCACTGCATAAACATTAGATAACAAGATATATGTGGAAGAATCTTTTGGTCGTAGCTCTAATAGTTTATCGGAAATCCTGATACACATTTCAGCATCCTTGTACTTCGTACATGCGCTCAACAGGGCCCCCCAAGTAGCTTCATCAGGCTCATATGGCATTGTAGTCATTAGCTCTTCAGCTTCCAATAAATGGCCTGAGCGACTAAGAAGATCCAGATAACACGTGTAGTGCTGCAATCTAGGAGTGATGCCATACTCATTCTTCATTGACTCAAAAAGCTGTCGCCCTTTCTGAACAAGACCAGCATGGCTACAAGCATAGATCAACCCGACAAAGGTCACCTCGTTGGGCTTCGCTCCTGCAAGAACCATCCTGTCATAAAGAGCCAATGCCTCCTCAGCTCGACCATGCTGTGCCTCTCCAACAACCATTGTCGTCCACGAGATTACATCACGGAATGTAATCCCCTCAAATACTTCTCTAGCAGAGAGTATATCACTGCATTTCGAGTACATGTCAATCAACGCATTCCCAACAATCATGTTGGACAGGAACCCAAGCCTCATTGTGGAACCATGCAACTGCCTACCCAGCACAAAAGCAGCCAGGTCTGCAGAACCGCCAATGACGATCGACAGCACGAATGCATCATCAATCCTAACACCATCCCGCCTCATCTCAACAAAAAGCTCCACTGCGCCGACACTCTCACCGGTGTTCACTAGCCCCGAGATGAGCGCAGTCCATGCAAACAGATTGCGCCCAGGCATGCTACGGAATAGCTGCAGCGCCTCCTCACTGCGGCCGTTGGACGCGTACCCAGAAACCAGGGCAGTCCACACAACGCTGTTCTTGGCACTCATACTGTCGAACACCTTCCTGCCATCGTCCGGGGAGCCACACTTGCAGTACATGTCGACCAGAGAGGACTTGACGACGTCATCCCCGTTGTATGGGGATACCACGAAATGCGCGTGCAGCTGCCTGCCAAGGCGGCGGCTACGGAGCCTGGCGAAGACGCTGGCAACGGAGCTGATCACGAAGTGGTCGGGGTGGAGGGCGTCGGCGGAGAGCATGCAGCGGAGGATCGGCAGCGCGAGCTCGGGGGACGCGGAGTGGGAGACGGCAGTGAGGAGCGAGGAGTAGATGTAGATGTCCCGGCGCGGGGTTTCGTCGAACAGGTGGAGGGCGTCAGGGAGGAGGCGGGACTTGGCATAGGCGGAGACGAGCGCCGCGGGGTTCGGAGGGTGGTGGGCCAGACCTTCCTTGAGGATGCGCGCGTGCATGCCGCGCACGGCCGCCGGCGACCCCGCCGTGGCACGGACGGCGGCTACAGCGGTGGCGGCCGGAGAGAGCATGCATAGGTCCGCTTCGTGTCTTCCTCCCCAATATCTGAGCCGTTCGTTCTGAATTGATTGATCAATAATTCTCCTTCTTTCGCCTCCGGCGATAGACGATGCGGTGGAAGCAGCCTCTGCTCGCAGGATGGGGATCGGCGCAAGCGGCGGGCGAGGAGAAGAAATTCGAGGCCGAGGCCGAGGCCGGATGGGATGGATTAGGATGCTCACCAGTGAGGGAGCAGGAGAACGCCGGGCCACCTCTGCTAGCAGGATGGAGATCGGCGGGAGTCGGGGGGCGGCGGGCAAGGAGACGGGGCGGATTGGGGAGGCGGAGGTCGTGCAGCGCTCTGCTGCCGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0109300.1 | 11 | 26525182 | G | C |
| Osa11LNT0109300.1 | 11 | 26525300 | G | T |
| Osa11LNT0109300.1 | 11 | 26525311 | T | C |
| Osa11LNT0109300.1 | 11 | 26525559 | A | C |
| Osa11LNT0109300.1 | 11 | 26525627 | C | A |
| Osa11LNT0109300.1 | 11 | 26525682 | A | C |
| Osa11LNT0109300.1 | 11 | 26525775 | G | A |
| Osa11LNT0109300.1 | 11 | 26525778 | T | A |
| Osa11LNT0109300.1 | 11 | 26525782 | T | C |
| Osa11LNT0109300.1 | 11 | 26525836 | C | T |
| Osa11LNT0109300.1 | 11 | 26525857 | A | G |
| Osa11LNT0109300.1 | 11 | 26525880 | A | C |
| Osa11LNT0109300.1 | 11 | 26525884 | C | T |
| Osa11LNT0109300.1 | 11 | 26525921 | T | C |
| Osa11LNT0109300.1 | 11 | 26525966 | G | A |
| Osa11LNT0109300.1 | 11 | 26525973 | T | G |
| Osa11LNT0109300.1 | 11 | 26526102 | C | T |
| Osa11LNT0109300.1 | 11 | 26526148 | G | T |
| Osa11LNT0109300.1 | 11 | 26526455 | G | A |
| Osa11LNT0109300.1 | 11 | 26526493 | C | T |
| Osa11LNT0109300.1 | 11 | 26526523 | G | T |
| Osa11LNT0109300.1 | 11 | 26526813 | A | G |
| Osa11LNT0109300.1 | 11 | 26526821 | T | C |
| Osa11LNT0109300.1 | 11 | 26526848 | A | G |
| Osa11LNT0109300.1 | 11 | 26526898 | C | T |
| Osa11LNT0109300.1 | 11 | 26527152 | T | C |
| Osa11LNT0109300.1 | 11 | 26527617 | A | G |
| Osa11LNT0109300.1 | 11 | 26527907 | A | T |
| Osa11LNT0109300.1 | 11 | 26527916 | A | T |
| Osa11LNT0109300.1 | 11 | 26529049 | C | T |
| Osa11LNT0109300.1 | 11 | 26529099 | G | C |
| Osa11LNT0109300.1 | 11 | 26529104 | G | A |
| Osa11LNT0109300.1 | 11 | 26529113 | T | C |
| Osa11LNT0109300.1 | 11 | 26529179 | A | G |
| Osa11LNT0109300.1 | 11 | 26529197 | C | G |
| Osa11LNT0109300.1 | 11 | 26529320 | T | C |
| Osa11LNT0109300.1 | 11 | 26529446 | A | G |
| Osa11LNT0109300.1 | 11 | 26529545 | A | G |
| Osa11LNT0109300.1 | 11 | 26529546 | A | G |
| Osa11LNT0109300.1 | 11 | 26529548 | A | G |
| Osa11LNT0109300.1 | 11 | 26529604 | T | C |
| Osa11LNT0109300.1 | 11 | 26529674 | G | A |
| Osa11LNT0109300.1 | 11 | 26529809 | A | G |
| Osa11LNT0109300.1 | 11 | 26529942 | A | C |
| Osa11LNT0109300.1 | 11 | 26530239 | C | T |
| Osa11LNT0109300.1 | 11 | 26530631 | T | C |
| Osa11LNT0109300.1 | 11 | 26530632 | C | T |
| Osa11LNT0109300.1 | 11 | 26530716 | T | C |
| Osa11LNT0109300.1 | 11 | 26528957 | A | T |
| Osa11LNT0109300.1 | 11 | 26527988 | A | T |
| Osa11LNT0109300.1 | 11 | 26525709 | T | C |
| Osa11LNT0109300.1 | 11 | 26527710 | A | G |
| Osa11LNT0109300.1 | 11 | 26530461 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0109300.1 | osa-miR5532 | Cleavage | 3.0 | 15.434 | 1 | 22 |
| Osa11LNT0109300.1 | osa-miR5822 | Translation | 4.5 | 9.169 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR5836 | Translation | 5.0 | 17.648 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR5337b | Translation | 4.5 | 16.351 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR398a | Translation | 5.0 | 12.099 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR166i-5p | Cleavage | 4.0 | 11.903 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR435 | Translation | 5.0 | 15.288 | 1 | 20 |
| Osa11LNT0109300.1 | osa-miR1425-3p | Translation | 5.0 | 10.744 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR1852 | Translation | 4.0 | 12.728 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR1854-5p | Translation | 3.0 | 14.989 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR1854-5p | Translation | 4.5 | 6.489 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR2092-5p | Cleavage | 4.5 | 11.399 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR2093-5p | Translation | 4.0 | 16.479 | 1 | 20 |
| Osa11LNT0109300.1 | osa-miR2118g | Translation | 3.5 | 21.143 | 1 | 22 |
| Osa11LNT0109300.1 | osa-miR2118i | Translation | 4.0 | 21.143 | 1 | 22 |
| Osa11LNT0109300.1 | osa-miR2118l | Translation | 3.5 | 21.143 | 1 | 22 |
| Osa11LNT0109300.1 | osa-miR2905 | Cleavage | 4.5 | 12.799 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR5822 | Translation | 4.5 | 15.748 | 1 | 21 |
| Osa11LNT0109300.1 | osa-miR2922 | Translation | 4.5 | 6.173 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0109300.1 | 11 | FON3 | Morphological trait | Panicle/flower | RM4601 | RM1233 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)