© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0110300.1
GCACAATCATTTTCTAGCATAAAACTAATTAATCAAGAACCTCTCACTGTCATGACATTCATGCATAGATTGACGCCTATCTCAGAGGGAAAGGAAGTAAATGTATCACACTCTATCTCAAGCAAACAACGACCCCAATGAAAACAGCGGCCATCGACCCATGCATTCGACGTCGATCGTCGACCTGCAATGCACACTGATCTGCTTTGCTTGGTTGCGTTCATGTCGGCTCAGAGTTCATCAGCCTACGATGCTTGAGCTTCCTGATCATGGTGGACTCTGCCTGCCCCTGCTAATTCCGGTGACCACGTAGTACAACGAACAGGAGTCTACTTGACTTGTAGTAGTAGTGCTGTGCATTCAAAGTTCAGTAGTTGAGGTGAGCATTTCAGCACCAGCCATCACATCTCCATTAGCCCATACGGAGGGGAGAGAACAAAAATGTGATGTCATGTTTAATTCGTCTACATCTTGGTCGCCGTCTGATCTCCTCATGATCATGTTATTACTGTTGCAGCACGAGCTCCTTCGATCCCCAAATGTACTTATGTACTATACATGTGTGCTCAGCTTGCGTGCCCACACTGAACTGGTAGAATCAGATCTCCAAAACTTGTAGTCTAGTGTAATGGACAGACCAAATCTGAGTAGCAAACCTTTGATGAAACCAGTTGTTTCTTGCTCGTACTGTCTCCTTTCGGTGATTGAACTGCCAGGACCACCACGGCGCTCGTCCAGGATAATTGAACTGCCGCGCTTCTGCTGCGACCAGAGATCACCAAAGAGATGATTATACTATATATCAGAGCTGTCACTCATCCAGTGGTTTCATCCAGTTGCGTCTCACCTCAGAGCTAGGGTCCGAAATCAAATTAGCATAATCTTGATCTATGTGTCAGTTAACACTTCCCCAGGATATAATTTTTGTAAATCCTAAAAGGATTCGTGCAGCCAAGTACCATCGAAGGTTCCAAACAAGCATCAATGCTACTAGAGGTGTTAACTGCTGATCCTTGCATGAATCAGTGTGACAACATTGTCCAAAAGCAAAAGATGTGGTCAACATTATCCCATTGTTGTCATTGCACCGACTCTACTATGAAATATATGCGCAGTAATGACAATCACTGTTCCCATGCAAAGGGAGATAGGAGTTAATTTCTCATCTTTATCATTTTTTGTTCTGTGTCCTTTGGGGTGTGGAAGGATCTTCTGTAGGCATGCTCAAACTTAAACATTGAACCAATAGCCCATTTGTGGACGACTATCTCACCAAAAATCTGAACAAGAACATGATCCTACTTTGAAGTGGTGAAACCTATATGGGTCTCTCAACACAATTTCCCTATTAAAAACCATGCTAACCAGCTTAAATACCAGATGACAGTCTGAACAGACTCTGAGATTCTTGAATATTCTTACTGTAGATCCTTCTGGGACAACGATAAGGCCATATGCCAACGCAAGTTTCTCACTATGGTTCCAAAGGTTCTGCTCCTTCTGCTCTTCATCTGTATCATGCAGTGCAGATGATGTGTCAGCAATATAACCTACTTCCCTGAGTTTCAGCAACATTTCATCTAACTTTGCGTAGATCTTCTCTGCATGCTTATGACCCCGGTCACCAATACCAAAGGTGCTTACTTCATTCTTAAGCTTAAGCCAACTGCAAGCTGGTCTTTTGTTTATATTGATGGTTTTCATGTGACTTCGTAATTTGTCAACATCCGCCCATCTTGCATTTGTAGCATATAAGTTTGACAGAAGAACATAAGCTGAATCATCGAATGGATCCAATTCAAGAAGCTTTTTGGCGGTTTTCCTCCCAATTTCAAGATTTTTGTGGGTTCTACTAGAGGACAACAAACTCCGCCATATCAGATCATTTGGTAAGACTGGCATTTCTTCAATAAATTTCTCTGCCTCTGCAAACCGACCTAAGCGTCCGAGAAGATCCACTATGCATACACAATGTTTTATTCCAGGGGAAACACCAAAGGAAGAAGCCATAGAGTTATAGTAATCTATACCCTTGTCTACTAGACCAGCATGACTACAAGCTGAGAGTAGAGCAACAAACGTTACATAGTCTGGCTTTCTACCCGTTGCAACCATTTGCTTAAATGTTTCCTCAGCTTCCTTGAAATACCCATATTTTGCATAACCAGATATCAGCGTATTCCAGCATTGTTGAGGTCGAATGGCTTGGTCAGGAACCACTTGCAACATTTCATCCATCTTTCCACATTTCCCATACATATCCATTGCAGCATTAACAACGTATGAGTCTGAATCCAGCCCAGATTTCATACCAAGACCATGTAGCTGCATGCCTTCTTCTAATGATGCGAGGCTTGCACAGGATGACAGACATTCAGCTAGGCAAACACGATCAAGTTTGTTTCCAGCATGCTGCATATCAATGAAGAGCTTTAGAGCTTCCTCTCCATGGCCAAGTTGGACATTCGCTGCTATTATGGCATTCCATGAAACAATGTTTTTGTTGGTGATACTATTGAATATATTAGTGCTTGACTCTAAATTGCCACATTTTGCATACATTGTGATTAGAGAGTTAGCAACATACTCATCTGACAAAAATCCAGTGCGTATTATGTATGCATGTAAGGGCCTTCCATAATTATGCAGATCATTTGAAGATGCGAAAGAACCATGGATATTTATCATTGTAATGTAATTTGGCTTTATCCCTGCACTTCTCATCCAAGAAAATACTTGCATTGCCTTTGTACCATCCTCAAGTACTGCGTAGCCACCAATAAGTACATTGTAGCTGACAATATCATGAGTCGGCATGGACTGAAAAACTTTCTCAGCATCTTCCATAGAATTGCATTTCCCATACATCGTGATGAGAGAATTACCAACCAGTAGATTTCTCTGAAGACTCAACTGCAATACGATGGCATGAACCATTTTGCCATCTATCAAGGCTCCTGGACTTGAACATGCTCCTAGAGCACTGGAAAATGTCAGGTGATTTGGGCTTTCATTTGTATGAAATAACTGACCTAGTGTCTTCAACGCGTCGGTGCTATTACAGTTCTGCACATAGGATGAAATCATAGTGTTCCATGATATTAGGTCCCTTCTACTCATGTTCCAGAACAGAAACTCAGCATCACTCAATTTTCCAGCAGCAGAGTACATATTAACCAGAGCATTAATTACTGTTACTGATGAATCCAGACTGCTCCTGAGACACAGGGAATGAATTCCACTTCCATGGCTGAAATGATCTGAGGAGGCACAGACAGACATCAAGCTGCACAGGGTTGTTGCATCAGGCCTTAATCCATGATGACGCATATCTGAAAACACCAGAAAACATTTGCTGCAGATTCCTTGATGTGAGTACATCGATATCATCGCGTTCCATGAAATAGTATCATGTTCCTCCATTCGATCAAAGAGCTTCTCAGCATCATGCACCCTTCCCAAGTTGCCAAACATGGTAATCAACGAATTCGCCACAGAGACCTGGTTTTGGAGTCCAGAGACAATGACCTGGGAAGCAACCTGAAGCCCAGGCACCTCATTCTCGAGCGATCCACACAAGCTGACCACTGTCGCGAACGCATTTGCATTGCATGGGACCCCATCCCTCCTCATCTGACGGTAAGCTCTCAATGCCTCTTCCAGGTAACCATTGGATGACAATGCCACCATCAGTGCTGTCCACGACACGACATTCCTCTCGGGCATCTCCCAGAACAACCTCTGCGCATCGGACACGATCCCACGGGAGCCATACAAGTGCAGGAGCGCCGTGCCGATGTAGACGTTGCCCATGAGCCCGGCCCTGTGGGTGAGCGCGTGGATGGCGGCGCCGCACGCGATGCCCTCGTCCCGGCCCCGGCGCTCGCACGCGGTGACGAGGCTGGCGAGCGCGAACCCGCTGAGCGGGACGCCACGCTCCCGCATACCGCGGAGCATCTCGAAGGCCGTCCCGTCGCGTCCGCAGCGGACGCAGCCGGAGACGGCGGTGTACCAGGTGGATGGGGTCCGGTCGGCCATTTCGTCGAACAGGTGGAGCGCGGCGGCGGCGGCGGAGGCATCCCGTTGGCGGAAGTAGAAGGCGAGGAGGGTGTTGCGGTGGAAGGCGCTGAGCGGGAGTGCGAGGCGGACGGCGAGGCCGTGGATGGCGCGGGCGAGGAGGGGGTGGTCGCCGAGGCGGGAGAAGCCGGCGCGCGGGAACTCCGCGACGGCCGGGTGCGGGTGGTCGGCGAGGAGGGCGAGAGTAGATGGAGGGCATTGTTGCGTGGAGGCGGTAGTGGTTACGCGGCAGGAGGAGGAAGTGGTGGCGAGGAGGAGGCGTGGCGGCGGCCGGTGGATGCGACGGCGGTGGATGGCCGGCGGCCGGGTGCGCCGAGGAAGGAGAGAGAGAAACAGCATCCAGAGCTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0110300.1 | 11 | 27496811 | C | T |
| Osa11LNT0110300.1 | 11 | 27496328 | T | C |
| Osa11LNT0110300.1 | 11 | 27495660 | G | A |
| Osa11LNT0110300.1 | 11 | 27497420 | T | C |
| Osa11LNT0110300.1 | 11 | 27497409 | T | C |
| Osa11LNT0110300.1 | 11 | 27497681 | A | T |
| Osa11LNT0110300.1 | 11 | 27494526 | C | G |
| Osa11LNT0110300.1 | 11 | 27493221 | G | A |
| Osa11LNT0110300.1 | 11 | 27496826 | T | C |
| Osa11LNT0110300.1 | 11 | 27492171 | C | T |
| Osa11LNT0110300.1 | 11 | 27492199 | G | C |
| Osa11LNT0110300.1 | 11 | 27492203 | A | G |
| Osa11LNT0110300.1 | 11 | 27492337 | A | G |
| Osa11LNT0110300.1 | 11 | 27492352 | C | G |
| Osa11LNT0110300.1 | 11 | 27492734 | G | A |
| Osa11LNT0110300.1 | 11 | 27492897 | G | A |
| Osa11LNT0110300.1 | 11 | 27492911 | T | C |
| Osa11LNT0110300.1 | 11 | 27492924 | C | T |
| Osa11LNT0110300.1 | 11 | 27493075 | C | G |
| Osa11LNT0110300.1 | 11 | 27493150 | T | A |
| Osa11LNT0110300.1 | 11 | 27493165 | A | G |
| Osa11LNT0110300.1 | 11 | 27493179 | T | C |
| Osa11LNT0110300.1 | 11 | 27493313 | G | T |
| Osa11LNT0110300.1 | 11 | 27493430 | C | T |
| Osa11LNT0110300.1 | 11 | 27493449 | A | G |
| Osa11LNT0110300.1 | 11 | 27493457 | A | G |
| Osa11LNT0110300.1 | 11 | 27493470 | A | G |
| Osa11LNT0110300.1 | 11 | 27493547 | C | T |
| Osa11LNT0110300.1 | 11 | 27493667 | A | G |
| Osa11LNT0110300.1 | 11 | 27493961 | C | T |
| Osa11LNT0110300.1 | 11 | 27492622 | C | T |
| Osa11LNT0110300.1 | 11 | 27494036 | T | A |
| Osa11LNT0110300.1 | 11 | 27494368 | G | A |
| Osa11LNT0110300.1 | 11 | 27494769 | T | C |
| Osa11LNT0110300.1 | 11 | 27494790 | A | C |
| Osa11LNT0110300.1 | 11 | 27495295 | A | C |
| Osa11LNT0110300.1 | 11 | 27495387 | C | A |
| Osa11LNT0110300.1 | 11 | 27495582 | T | C |
| Osa11LNT0110300.1 | 11 | 27495684 | A | G |
| Osa11LNT0110300.1 | 11 | 27496125 | A | G |
| Osa11LNT0110300.1 | 11 | 27496131 | T | C |
| Osa11LNT0110300.1 | 11 | 27496409 | T | C |
| Osa11LNT0110300.1 | 11 | 27496524 | T | C |
| Osa11LNT0110300.1 | 11 | 27496564 | T | C |
| Osa11LNT0110300.1 | 11 | 27496586 | T | C |
| Osa11LNT0110300.1 | 11 | 27496588 | G | A |
| Osa11LNT0110300.1 | 11 | 27496928 | C | A |
| Osa11LNT0110300.1 | 11 | 27496953 | C | G |
| Osa11LNT0110300.1 | 11 | 27496991 | A | G |
| Osa11LNT0110300.1 | 11 | 27497155 | A | G |
| Osa11LNT0110300.1 | 11 | 27497253 | C | T |
| Osa11LNT0110300.1 | 11 | 27497355 | A | C |
| Osa11LNT0110300.1 | 11 | 27497480 | T | G |
| Osa11LNT0110300.1 | 11 | 27497487 | A | C |
| Osa11LNT0110300.1 | 11 | 27497555 | A | C |
| Osa11LNT0110300.1 | 11 | 27497592 | A | G |
| Osa11LNT0110300.1 | 11 | 27497807 | A | G |
| Osa11LNT0110300.1 | 11 | 27497936 | C | G |
| Osa11LNT0110300.1 | 11 | 27497937 | A | G |
| Osa11LNT0110300.1 | 11 | 27497963 | A | T |
| Osa11LNT0110300.1 | 11 | 27497972 | G | A |
| Osa11LNT0110300.1 | 11 | 27498068 | G | A |
| Osa11LNT0110300.1 | 11 | 27498073 | G | A |
| Osa11LNT0110300.1 | 11 | 27498076 | T | A |
| Osa11LNT0110300.1 | 11 | 27496211 | T | C |
| Osa11LNT0110300.1 | 11 | 27497633 | C | T |
| Osa11LNT0110300.1 | 11 | 27496734 | T | C |
| Osa11LNT0110300.1 | 11 | 27497287 | C | T |
| Osa11LNT0110300.1 | 11 | 27492333 | C | T |
| Osa11LNT0110300.1 | 11 | 27492596 | A | C |
| Osa11LNT0110300.1 | 11 | 27493820 | C | T |
| Osa11LNT0110300.1 | 11 | 27494353 | C | T |
| Osa11LNT0110300.1 | 11 | 27497265 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0110300.1 | osa-miR5537 | Translation | 4.5 | 15.481 | 1 | 22 |
| Osa11LNT0110300.1 | osa-miR5543 | Translation | 4.5 | 9.397 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR5544 | Cleavage | 5.0 | 14.087 | 1 | 22 |
| Osa11LNT0110300.1 | osa-miR5815 | Translation | 5.0 | 17.084 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR5143b | Translation | 5.0 | 10.992 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR5823 | Translation | 5.0 | 14.568 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR396a-3p | Cleavage | 5.0 | 12.383 | 1 | 20 |
| Osa11LNT0110300.1 | osa-miR396b-3p | Cleavage | 5.0 | 12.383 | 1 | 20 |
| Osa11LNT0110300.1 | osa-miR396c-3p | Cleavage | 5.0 | 12.383 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR166i-5p | Translation | 4.0 | 11.881 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR435 | Cleavage | 4.0 | 10.59 | 1 | 20 |
| Osa11LNT0110300.1 | osa-miR528-5p | Cleavage | 4.0 | 21.007 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR528-5p | Cleavage | 3.5 | 17.043 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR530-3p | Cleavage | 4.0 | 10.919 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR1435 | Cleavage | 4.5 | 18.053 | 1 | 20 |
| Osa11LNT0110300.1 | osa-miR1860-5p | Cleavage | 4.0 | 16.306 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR1882f | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR2097-5p | Translation | 4.5 | 15.493 | 1 | 22 |
| Osa11LNT0110300.1 | osa-miR5143a | Translation | 5.0 | 10.992 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR5143a | Cleavage | 5.0 | 16.206 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR5486 | Cleavage | 5.0 | 20.836 | 1 | 21 |
| Osa11LNT0110300.1 | osa-miR5143b | Cleavage | 5.0 | 16.206 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR1882a | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR1882b | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR1882c | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR1882d | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR1882e-5p | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR1882g | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Osa11LNT0110300.1 | osa-miR1882h | Cleavage | 3.0 | 23.717 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0110300.1 | 11 | FON3 | Morphological trait | Panicle/flower | RM4601 | RM1233 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)