© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0009100.2
GTGCAGGTCCACATGAACAGTTCACTTCTTTAGCAATTACAGAGAGAGTTCATGAGGTTTAACATCTGTAAACTTTTGATCCTTGTAGCCAGCTGCTTAATCTGCCCTACTGTTTATTGGAAAGAATTAGGATTGACCCCCTACAAAATTCTTCAGCAGCGACAACAGTACATGCCGATTGCCGCACCACCATGCGCATCTACAGTTAGAATTCTGTCACAATTTCTCTGCAAGGTTACACTACATGAGATGGGCACGGCCGGCCAGGCCTTTAGTCTGAAACTCTCTTCTGTTACTTCTCTTCGTCTGATTGTGAAGGCCCGTTGATGGCATCAGCAAAGTACTCAACTATGTCATTCTGGTCTGGGGAATCAAGTAAAATGTCGGAGTCTGAGGCCAGGAAAGGAGTACCTGCGTAGTTCTCAAGTGCTTCCAAGTCTCCCAAACTTGTTAAATCTGCTGTTAGGTCAGAAAGGCTGAAATTCCAGAGCTGTCCTAAAGATCTGATGGAGTCCCTTGACGAGCCATCTGGTCCTAACTGCAGTTGTCCTGTGTTCTCAACATCGGATACAAATGTTGAATCTAGAGCTGATGTATCCATGGTTATCCCTGGTATCTCAGATGGAGTGAAAGGAGCATGGTTGCTTGATGCTGCCGATGAGGGACTCACAGCCATTTCAGATGACATAGCACTGCAGGTAGCGCCAACATGAGCAGTTTCAGGTGCACCGTTGTCCACAACCATGTCATTTCCAGAGTTCATGCGAATTGGATGATAACCACCAGCTGCAGGGATCCCATTCACTACATGCCCGCTGGATAGACCACAGGCCATTGAGTCAATGTGAGGCTGGCCAGGAGCAGGCATCATAGGTTGCTGAAGTACCGGATATCCCATAGGCAAATTATTAACTGGCATAGGATGCATTCCGTTTTGCATAGGAGCCAATGGAACATTTGGAGGTGCTGGATATTTCATCAAATTGTATTGGTGCTGCAGTAAATGGTTGAACAAGATAATCTGCCTTTTCAATTTCAACCGTATATAGTAAGCACGAAAGAATTCAGAGTTCTCTTCTTCAAGTTTCTGCCATACTGAACATCAAAGAGTATCAAACAAAAATGAGCAGCATAAATTAAAAGGCTAATGGACATATATAGCAATCTGGAGGCTTTATATACAATAGACATAGCATAACATAAGTTGGGCTTAGGATGTTTACAAATTTCCATTTGACCGTGCATTCCTATTTCTTTAAGTAAAATGTATAAATTGTCAGTAGGGTAAAGCATGTAAGATTCTACATACATCTGGTACTGAGTTTTGGGATGCCGCATTTATACAAATTTAATAGAGAGCAACAAATGCACGGTTTATATCAAACAAATTTAGCCACCATCTTATTAGCAAGGTTTACCTATGACTGAGTAAGATGAATTCCATACTGGAAGCAAAAGCGTATATTAGCAATTACAATAAGTACGGGAAAAAACAAAGATTACACAAAACTAGTGAGTGCGGTATGAAACCCTCAAAACATTAATATCATCATCAACTGATTTTGCAACATCACCTAAAGTAGTGAAACCAGGTTCTATTCTTGCACGAGTAGAAAGCGTCCTAACAACCTCTCCTTTGTTCATGTATAGCTGTAGACAGCGCTCTATCAAATTCTGCACAAGTTCAATATCTTCACGGGAGACCTTTCTATTATCATTACTAGCGATAGACAATGAACCAGAGTCTCCTCCAGGACCATCAGTGGCCATTGGATTCGGCTGGTTACTTTGCACTTCATTAGTACCTTGTGCTGATGACTGCAACTCGGTTGGGCTCTGAATATCCAGAATCTCATTTTTTATATATTTACATGCAAATGTCAGGTGTTCGCTCCAATGTTTCCCTGAGAATCCTTCATTGCAACATATGACATAAAAACAGCTATTCCAAGATCAATGTTTATCCTTCAATTCGATTCGAGCCGGGAAGGATGCGAGGCGAAAGGAGACAGACAGACAGACAGATAGACAGAAACAGAGACAGAGACAGAGAAAGAGAGCTTGTCCAGGCCGCGCGGGGGCGGGGAGGGGAGGAGAGGAGGGAGGCCGTCGCCGCCGCCGCCGCCGCCGCGCTCGCTCGCCGGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0009100.2 | 1 | 6572236 | A | T |
| Osa01LNT0009100.2 | 1 | 6574180 | C | A |
| Osa01LNT0009100.2 | 1 | 6574550 | T | C |
| Osa01LNT0009100.2 | 1 | 6574668 | A | G |
| Osa01LNT0009100.2 | 1 | 6574986 | A | G |
| Osa01LNT0009100.2 | 1 | 6572911 | A | G |
| Osa01LNT0009100.2 | 1 | 6575022 | T | G |
| Osa01LNT0009100.2 | 1 | 6575492 | A | G |
| Osa01LNT0009100.2 | 1 | 6575891 | T | A |
| Osa01LNT0009100.2 | 1 | 6572267 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0009100.2 | osa-miR5143b | Cleavage | 5.0 | 11.262 | 1 | 24 |
| Osa01LNT0009100.2 | osa-miR397a | Cleavage | 5.0 | 21.9 | 1 | 21 |
| Osa01LNT0009100.2 | osa-miR166i-5p | Cleavage | 4.0 | 21.361 | 1 | 21 |
| Osa01LNT0009100.2 | osa-miR810a | Cleavage | 4.5 | 13.294 | 1 | 21 |
| Osa01LNT0009100.2 | osa-miR5143a | Cleavage | 5.0 | 11.262 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | C955 | C885 |
| Osa01LNT0009100.2 | 1 | An9 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Osa01LNT0009100.2 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0009100.2 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0009100.2 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0009100.2 | 1 | Rf | Physiological trait | Sterility | nan | nan |
| Osa01LNT0009100.2 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0009100.2 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0009100.2 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0009100.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0009100.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0009100.2 | 1 | gp1 | Morphological trait | Panicle/flower | RG532 | RM259 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)